Shasha Lab


Biological Computing Projects

I've worked on several projects over the last few years, notably with the plant biology labs of Gloria Coruzzi, Ken Birnbaum, Philip Benfey, and Rodrigo Gutierrez. More recently I'm working with Rich Bonneau's computational group.

Related Pattern Recognition Projects

Software

Statstream (incremental correlation in time series) software description

Tree searching (finding a small tree in a database of large trees; where the order among siblings doesn't matter) software description

Tree difference (finding the difference between trees, where the order among siblings does matter) software description

Graph comparison (heuristic techniques for comparing graphs) software description

Graph clustering (finding interesting motifs in graphs) software description

StratPal (software for designing strategies) software description


Last modified January 2008.