+Motile |Escherichia coli |E |oneneeded |{[O] COG1764 Stress-induced protein OsmC}: osmC +Motile |Escherichia coli |E |oneneeded |{[R] COG1896 Predicted hydrolases of HD superfamily}: ec1788628 +Motile |Escherichia coli |E |oneneeded |{[O] COG1764 Stress-induced protein OsmC}: osmC +Motile |Escherichia coli |E |oneneeded |{[C] COG1042 Acyl-CoA synthetases}: yfiQ_1 +Motile |Escherichia coli |E |oneneeded |{[O] COG1397 ADP-ribosylglycohydrolase#[E] COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB}: ec1788416#yjiM +Motile |Escherichia coli |E |oneneeded |{[C] COG1042 Acyl-CoA synthetases}: yfiQ_1 +Motile |Escherichia coli |E |oneneeded |{[M] COG1794 Aspartate racemase}: ygeA +Motile |Escherichia coli |E |oneneeded |{[C] COG1042 Acyl-CoA synthetases}: yfiQ_1 +Motile |Escherichia coli |E |oneneeded |{[O] COG1764 Stress-induced protein OsmC}: osmC +Motile |Escherichia coli |E |oneneeded |{[O] COG1764 Stress-induced protein OsmC}: osmC +Motile |Escherichia coli |E |oneneeded |{[S] COG1859 Uncharacterized ACR}: yjiI +Motile |Escherichia coli |E |oneneeded |{[O] COG1764 Stress-induced protein OsmC}: osmC +Motile |Escherichia coli |E |oneneeded |{[C] COG1042 Acyl-CoA synthetases}: yfiQ_1 +Motile |Escherichia coli |E |oneneeded |{[S] COG2105 Uncharacterized ACR, YkqA family}: ytfP +flagella |Escherichia coli |E |oneneeded |{[C] COG1254 Acylphosphatases}: ec1787203 +flagella |Escherichia coli |E |oneneeded |{[L] COG1515 Deoxyinosine 3'endonuclease (endonuclease V)#[S] COG1801 Uncharacterized ACR}: yjaF#yecE +flagella |Escherichia coli |E |oneneeded |{[N] COG1706 Flagellar basal-body P-ring protein FlgI}: flgI +flagella |Escherichia coli |E |oneneeded |{[G] COG1440 Phosphotransferase system cellobiose-specific component IIB#[G] COG1447 Phosphotransferase system cellobiose-specific component IIA#[G] COG1455 Phosphotransferase system cellobiose-specific component IIC#[E] COG2113 Periplasmic binding protein of proline/glycine betaine ABC-type transport system}: celA#celC#celB#proX +flagella |Escherichia coli |E |oneneeded |{[C] COG1254 Acylphosphatases}: ec1787203, {[R] COG1896 Predicted hydrolases of HD superfamily}: ec1788628 +flagella |Escherichia coli |E |oneneeded |{[C] COG1254 Acylphosphatases}: ec1787203 +flagella |Escherichia coli |E |oneneeded |{[C] COG1254 Acylphosphatases}: ec1787203 +neutrophile |Escherichia coli |E |oneneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU +neutrophile |Escherichia coli |E |oneneeded |{[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB +neutrophile |Escherichia coli |E |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU +neutrophile |Escherichia coli |E |oneneeded |{[C] COG0567 Pyruvate and 2-oxoglutarate dehydrogenases, E1 component}: sucA +neutrophile |Escherichia coli |E |oneneeded |{[T] COG1734 DnaK suppressor protein DskA}: dksA +NO3 reduction |Escherichia coli |E |allneeded |{[J] COG0009 Putative translation factor (SUA5)#[J] COG0130 Pseudouridine synthase}: yciO=yrdC#truB, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[M] COG0794 Predicted sugar phosphate aminotransferases involved in capsule formation}: gutQ_1=yrbH_1, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +NO3 reduction |Escherichia coli |E |allneeded |{[HC] COG0543 2-Octaprenylphenol hydroxylase and related flavodoxin oxidoreductases}: ubiB, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[H] COG0352 Thiamine monophosphate synthase}: thiE +NO3 reduction |Escherichia coli |E |allneeded |{[C] COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases}: lctD, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[PH] COG0609 Iron, hemin, cobalamine permeases}: btuC=fepG=fhuB=fecC=fepD=fecD, {[J] COG0689 RNase PH}: rph +NO3 reduction |Escherichia coli |E |allneeded |{[R] COG0218 Predicted GTPases}: yihA, {[E] COG0346 Lactoylglutathione lyase}: gloA=yaeR +NO3 reduction |Escherichia coli |E |allneeded |{[EPGR] COG1101 ATPase components of various transport systems}: ec1788053=phnK=ybbL, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +NO3 reduction |Escherichia coli |E |allneeded |{[P] COG0569 Potassium uptake system NAD-binding component TrkA}: trkA=ec1787440_2, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[S] COG1694 Uncharacterized ACR, MazG family}: mazG +NO3 reduction |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[CHR] COG1052 Lactate dehydrogenase and related dehydrogenases}: pdxB=ycdW=yiaE=ldhA +NO3 reduction |Escherichia coli |E |allneeded |{[H] COG0301 Enzyme of thiamine biosynthesis (ThiI); contains a PP-loop superfamily ATPase domain and an uncharacterized conserved domain}: yajK, {[H] COG0352 Thiamine monophosphate synthase}: thiE +NO3 reduction |Escherichia coli |E |allneeded |{[R] COG0218 Predicted GTPases}: yihA, {[M] COG1088 dTDP-D-glucose 4,6-dehydratase}: rfbB=rffG +NO3 reduction |Escherichia coli |E |allneeded |{[C] COG0281 Malic enzyme}: sfcA=ec1788806_1, {[R] COG0615 Predicted cytidylyltransferases}: ec1789432_2 +NO3 reduction |Escherichia coli |E |allneeded |{[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: apaH=pphA=ygbH, {[J] COG0689 RNase PH}: rph +NO3 reduction |Escherichia coli |E |allneeded |{[R] COG0600 Uncharacterized permeases}: tauC=ycbM, {[J] COG0689 RNase PH}: rph +NO3 reduction |Escherichia coli |E |allneeded |{[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase#[E] COG0473 Isopropylmalate dehydrogenase}: purC#yeaU=leuB, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[R] COG1534 Predicted RNA-binding protein containing KH domain#[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein MobB}: yhbY#yihC +NO3 reduction |Escherichia coli |E |allneeded |{[H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2}: thiF=moeB, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +NO3 reduction |Escherichia coli |E |allneeded |{[E] COG0078 Ornithine carbamoyltransferase}: argI=argF=ygeW, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +NO3 reduction |Escherichia coli |E |allneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: ycbY_1, {[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component#[EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component}: dppD=oppD=sapD=ec1787759=nikD#oppF=dppF=ec1787758=sapF=nikE +NO3 reduction |Escherichia coli |E |allneeded |{[F] COG0127 Xanthosine triphosphate pyrophosphatase, HAM1/YggV family}: yggV, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases}: asnS, {[R] COG2050 Uncharacterized protein PaaI, possibly involved in aromatic compounds catabolism}: ec1787662=ybdB=ec1787976=yigI +NO3 reduction |Escherichia coli |E |allneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: ycbY_1, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +NO3 reduction |Escherichia coli |E |allneeded |{[R] COG0561 Predicted hydrolases of the HAD superfamily}: ybhA=yidA=ec1787043=cof=ec1787067=yigLa, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase#[F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase PurE#[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain#[F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain#[E] COG0065 3-Isopropylmalate dehydratase large subunit#[E] COG0066 3-isopropylmalate dehydratase small subunit#[E] COG0079 Histidinol-phosphate aminotransferase#[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases#[F] COG0150 Phosphoribosylaminoimidazol (AIR) synthetase PurM#[E] COG0160 PLP-dependent aminotransferases#[R] COG0456 Acetyltransferases#[L] COG1082 Predicted endonucleases}: purF#purE#purL_1#purL_2#leuC=ybhJ_1#leuD=ybhJ_2#hisC#mhpF=leuA#purM#argD=goaG=yg jG=cstC=gabT#rimI#ec1787573=yjfW=yiaR=ygbM=gip=yhfP, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[E] COG0620 Methionine synthase II (cobalamin-independent)}: metE, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG0615 Predicted cytidylyltransferases}: ec1789432_2 +NO3 reduction |Escherichia coli |E |allneeded |{[P] COG0803 Zn-binding (lipo)protein of the ABC-type Zn transport system (surface adhesin A)}: yebL, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[P] COG1108 ABC-type Mn/Zn transport systems, ATPase component#[P] COG1121 ABC-type iron (III) transport system, ATPase component}: yebI#yebM, {[R] COG2050 Uncharacterized protein PaaI, possibly involved in aromatic compounds catabolism}: ec1787662=ybdB=ec1787976=yigI +NO3 reduction |Escherichia coli |E |allneeded |{[J] COG1841 Ribosomal protein L30/L7E}: rpmD, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[O] COG0602 Organic radical activating enzymes#[R] COG0603 Predicted ATPase (PP-loop superfamily), confers aluminum resistance}: ygcF=nrdG#ybaX, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +NO3 reduction |Escherichia coli |E |allneeded |{[G] COG0483 Inositol phosphatase family proteins}: suhB, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing#[H] COG0303 Molybdopterin biosynthesis enzyme#[H] COG0314 Molybdopterin converting factor, large subunit#[H] COG0315 Molybdenum cofactor biosynthesis enzyme#[O] COG0501 Predicted Zn-dependent proteases with possible chaperone function, HtpX family#[EP] COG0555 ABC-type cysteine/molybdate transport systems, permease components#[P] COG0725 Molybdenum-binding periplasmic protein#[H] COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A}: bisC=bisZ=fdhF=fdoG=napA=narG=narZ#moeA#moaE#moaC#htpX=yggG=ycaL=ec1788840#cysU= cysW=modB#modA#mob, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +NO3 reduction |Escherichia coli |E |allneeded |{[T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins}: ydaA=ybdQ=ynaF=uspA=yiiT=yecG, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +NO3 reduction |Escherichia coli |E |allneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: ycbY_1, {[J] COG0689 RNase PH}: rph +NO3 reduction |Escherichia coli |E |allneeded |{[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: glpG, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[P] COG0168 Potassium uptake system component TrkG}: trkG=trkH, {[R] COG2050 Uncharacterized protein PaaI, possibly involved in aromatic compounds catabolism}: ec1787662=ybdB=ec1787976=yigI +NO3 reduction |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: gdhA#accD#accA +NO3 reduction |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[R] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)}: fabG=yohF=yjgI=yohE=srlD=yciK=yfeF +NO3 reduction |Escherichia coli |E |allneeded |{[K] COG1522 Transcriptional regulators, Lrp family}: asnC=lrp=ybaO, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[H] COG0611 Thiamine monophosphate kinase}: thiL, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +NO3 reduction |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[C] COG0281 Malic enzyme}: sfcA=ec1788806_1 +NO3 reduction |Escherichia coli |E |allneeded |{[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases involved in lipopolysaccharide biosynthesis/translation and initiation factor eIF2B subunits}: ec1786559, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: yfhO +NO3 reduction |Escherichia coli |E |allneeded |{[J] COG0689 RNase PH}: rph, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: fepC=fecE=fhuC=btuD +NO3 reduction |Escherichia coli |E |allneeded |{[O] COG0695 Glutaredoxin and related proteins}: yibM=grxA=nrdH=grxB, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +NO3 reduction |Escherichia coli |E |oneneeded |{[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL +NO3 reduction |Escherichia coli |E |oneneeded |{[S] COG1444 Uncharacterized ACR}: ypfI +NO3 reduction |Escherichia coli |E |oneneeded |{[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL, {[M] COG1794 Aspartate racemase}: ygeA +NO3 reduction |Escherichia coli |E |oneneeded |{[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL +NO3 reduction |Escherichia coli |E |oneneeded |{[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL, {[KH] COG1654 Biotin operon repressor}: birA_1 +NO3 reduction |Escherichia coli |E |oneneeded |{[S] COG1444 Uncharacterized ACR}: ypfI +NO3 reduction |Escherichia coli |E |oneneeded |{[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL, {[S] COG1859 Uncharacterized ACR}: yjiI +NO3 reduction |Escherichia coli |E |oneneeded |{[C] COG1866 Phosphoenolpyruvate carboxykinase#[HE] COG1932 Phosphoserine aminotransferase#[P] COG2116 Formate/nitrite family of transporters}: pckA#serC#focA=focB=yfdC=nirC +NO3 reduction |Escherichia coli |E |oneneeded |{[C] COG1017 Haemoglobin-like flavoprotein#[C] COG1069 Ribulose kinase#[P] COG1276 Putative copper export protein#[FH] COG1953 Cytosine/uracil/thiamine/allantoin permeases#[R] COG2130 Putative NADP-dependent oxidoreductases}: hmp_1#araB#ec1788145#ybbW=codB#yncB, {[S] COG1444 Uncharacterized ACR}: ypfI +NO3 reduction |Escherichia coli |E |oneneeded |{[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL +NO3 reduction |Escherichia coli |E |oneneeded |{[M] COG1794 Aspartate racemase}: ygeA +NO3 reduction |Escherichia coli |E |oneneeded |{[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL +heterotrophic |Escherichia coli |E |oneneeded |{[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component#[EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component}: dppD=oppD=sapD=ec1787759=nikD#oppF=dppF=ec1787758=sapF=nikE, {[I] COG0736 Acyl-carrier protein synthase}: dpj -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[R] COG0392 Predicted integral membrane protein}: ybhN -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2}: yaaD=slyD -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[O] COG0298 Hydrogenase expression factor}: hybG=hypC, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[R] COG0392 Predicted integral membrane protein}: ybhN -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: kdsB#kdtA#ycaH -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[O] COG0068 Hydrogenase maturation factor#[O] COG0309 Hydrogenase formation factor#[C] COG0374 Ni/Fe hydrogenase alpha subunit#[R] COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)#[O] COG0409 Hydrogenase expression-formation factor#[C] COG0680 Hydrogenase formation/expression factor HyaD/HupD}: hypF#hypE#hyaB=hybC#hybF=hypA#hypD#hyaD=hybD=hycI, {[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[L] COG0417 DNA-dependent DNA polymerase elongation subunit (family B)#[K] COG0430 RNA phosphate cyclase}: polB#yhgK+J, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: potA=potG=ec1787712#potB=potH=ec1787713#potC=potI=ec1787714 -obligate aerobe |Escherichia coli |E |oneneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[L] COG0610 Restriction enzymes type I helicase subunits and related helicases}: hsdR, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[G] COG1626 Neutral trehalase}: treA=treF -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[S] COG1767 Uncharacterized proteins, CitG homologs}: citG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase}: wecC, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[N] COG0811 Biopolymer transport proteins}: tolQ=exbB -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[C] COG0426 Uncharacterized flavoproteins#[C] COG1142 Fe-S-cluster-containing hydrogenase components 2}: ygaK_1#hycB=yffE=yffG_1=hydN=ygfT_1=ygfS=ec1787963, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0797 Lipoproteins}: rlpA -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711 -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[S] COG1593 Integral membrane protein, possible transporter}: yiaN -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[R] COG0496 Survival protein SurE, predicted acid phosphatase}: surE -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[E] COG0814 Amino acid permeases}: sdaC=tnaB=tyrP=yhaO=yqeG=yhjV=mtr -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[P] COG0530 Ca2+/Na+ antiporter}: yrbG, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase NrdD}: nrdD -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[R] COG0496 Survival protein SurE, predicted acid phosphatase}: surE, {[R] COG0666 Ankyrin repeat proteins}: yahD -obligate aerobe |Escherichia coli |E |oneneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[R] COG0392 Predicted integral membrane protein}: ybhN -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[H] COG1541 Coenzyme F390 synthetase}: ec1787664 -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[R] COG0434 Predicted TIM-barrel enzyme}: yjhM, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[O] COG1397 ADP-ribosylglycohydrolase#[E] COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB}: ec1788416#yjiM -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1}: fkpA=fklB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711 -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: tolB -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[R] COG0613 Predicted metal-dependent phosphoesterases (PHP family)}: yciV, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[I] COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)}: yjiL -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[C] COG1882 Pyruvate-formate lyase#[R] COG2005 N-terminal domain of molybdenum-binding protein ModE}: pflD=pflB=yhaS=ybiW=yfiD#modE -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[R] COG0496 Survival protein SurE, predicted acid phosphatase}: surE -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[R] COG0392 Predicted integral membrane protein}: ybhN -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711 -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[C] COG0633 Ferredoxin}: fdx=yfaE, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes}: yneB=ec1788414 -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[S] COG2215 Predicted membrane protein}: yohM -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[C] COG1042 Acyl-CoA synthetases}: yfiQ_1 -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[C] COG1726 Membrane-bound Fe-S proteins, RfnC family}: ec1787916 -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[S] COG1720 Uncharacterized ACR, YaeB/UPF0066 family}: yaeB -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[R] COG0392 Predicted integral membrane protein}: ybhN, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[R] COG0392 Predicted integral membrane protein}: ybhN, {[N] COG0811 Biopolymer transport proteins}: tolQ=exbB -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[S] COG1986 Uncharacterized ACR}: yjjX -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA -obligate aerobe |Escherichia coli |E |oneneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[R] COG0392 Predicted integral membrane protein}: ybhN, {[T] COG2204 AAA superfamily ATPases with N-terminal receiver domain}: atoC=glnG=hydG=yfhA -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[P] COG0370 Ferrous ion uptake system protein FeoB (predicted GTPase)#[FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases}: feoB#ygfL=codA=ygfP=yahJ, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[R] COG1178 Uncharacterized transport system, permease component#[H] COG1840 Thiamine-binding periplasmic proteins}: yabK#tbpA -obligate aerobe |Escherichia coli |E |oneneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[R] COG0392 Predicted integral membrane protein}: ybhN -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[R] COG1451 Predicted metal-dependent hydrolase}: ygjP -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[R] COG0392 Predicted integral membrane protein}: ybhN, {[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: tolB -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[H] COG0382 4-hydroxybenzoate octaprenyltranferase}: ubiA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711 -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN -obligate aerobe |Escherichia coli |E |oneneeded |{[O] COG0068 Hydrogenase maturation factor#[O] COG0309 Hydrogenase formation factor#[C] COG0374 Ni/Fe hydrogenase alpha subunit#[R] COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)#[O] COG0409 Hydrogenase expression-formation factor#[C] COG0680 Hydrogenase formation/expression factor HyaD/HupD}: hypF#hypE#hyaB=hybC#hybF=hypA#hypD#hyaD=hybD=hycI, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[S] COG1872 Uncharacterized ACR, YggU family}: yggU -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[J] COG0565 rRNA methylase}: lasT=ec1788881, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[P] COG1918 FeoA protein, probably involved in Fe2+ transport}: feoA -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[R] COG1203 Predicted helicases#[F] COG1781 Aspartate carbamoyltransferase regulatory subunit#[C] COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain#[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain}: ygcB#pyrI#fumA_2=fumB_2=ttdB#ttdA=fumB_1=fumA_1 -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG0763 Lipid A disaccharide synthetase#[M] COG0774 UDP-3-0-acyl-N-acetylglucosamine deacetylase#[N] COG0848 Biopolymer transport protein ExbD#[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase#[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase}: lpxB#lpxC#exbD=tolR#lpxA#lpxD -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[R] COG0392 Predicted integral membrane protein}: ybhN, {[M] COG1452 Organic solvent tolerance protein OstA}: imp -obligate aerobe |Escherichia coli |E |oneneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[R] COG0392 Predicted integral membrane protein}: ybhN, {[R] COG2194 Predicted membrane-associated, metal-dependent hydrolase}: ybiP=yhbX=yijP=yhjW=yjdB -obligate aerobe |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -microaerophilic |Escherichia coli |E |oneneeded |{[E] COG0002 Acetylglutamate semialdehyde dehydrogenase#[F] COG0005 Purine nucleoside phosphorylase#[S] COG0432 Uncharacterized ACR, YjbQ/UPF0047 family#[E] COG0548 Acetylglutamate kinase#[R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold}: argC#xapA#yjbQ#argA_1=argB#yjfR, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[G] COG1363 Cellulase M and related proteins#[J] COG1514 2'-5' RNA ligase and related enzymes#[R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family}: frvX=yjhO=ec1788727#yadP#wzxC=rfbX -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[O] COG1180 Pyruvate-formate lyase-activating enzyme}: pflA=pflC=yjjW=ybiY -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[C] COG1526 Uncharacterized protein FdhD/NarQ required for formate dehydrogenase activity}: fdhD -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo, {[M] COG1088 dTDP-D-glucose 4,6-dehydratase}: rfbB=rffG -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[C] COG0650 Formate hydrogenlyase subunit 4, HycD}: hyfC=hycD -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[E] COG0165 Argininosuccinate lyase}: argH -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[ER] COG1387 Histidinol phosphatase and related hydrolases of the PHP family}: ycdX -microaerophilic |Escherichia coli |E |oneneeded |{[N] COG1450 General secretion pathway protein D#[S] COG1805 Uncharacterized membrane protein, RnfD family}: yheF=hopQ#ydgO -microaerophilic |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[G] COG0448 ADP-glucose pyrophosphorylase#[S] COG1327 Uncharacterized BCR#[G] COG1523 Pullulanase and related glycosidases}: glgC#ybaD#glgX -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0262 Dihydrofolate reductase}: folA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0262 Dihydrofolate reductase}: folA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[S] COG0393 Uncharacterized ACR, MJ1170 family#[R] COG0433 Predicted ATPase#[C] COG0644 Dehydrogenases (flavoproteins)#[C] COG1032 Fe-S oxidoreductases family 2}: ec1787091#yjgR#fixC=ydiS=yidS=ygcN#ygiR+Q -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes}: yneB=ec1788414 -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[P] COG1918 FeoA protein, probably involved in Fe2+ transport}: feoA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG2151 Putative aromatic ring hydroxylating enzyme}: ec1787657 -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo, {[S] COG0857 Uncharacterized N-terminal domain of phosphotransacetylases#[T] COG2062 Phosphohistidine phosphatase SixA}: pta_1#ec1788681 -microaerophilic |Escherichia coli |E |oneneeded |{[R] COG0110 Acetyltransferases (the isoleucine patch superfamily)}: wcaB=yefH=ylaD=wcaF=lacA=ec1786556=ec1787698, {[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB -microaerophilic |Escherichia coli |E |oneneeded |{[R] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)}: mhpD=ec1787428, {[H] COG0262 Dihydrofolate reductase}: folA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[C] COG0371 Glycerol dehydrogenase}: gldA=ybdH -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[E] COG0710 3-dehydroquinate dehydratase}: aroD -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo, {[S] COG1280 Conserved membrane proteins, YahN/YigJ family}: yeaS=yigK=yahN -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[R] COG0637 Predicted phosphatase/phosphohexomutase#[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase (trmA)}: yqaB=ycjU=yieH=yfbT#trmA=ygcA=ybjF -microaerophilic |Escherichia coli |E |oneneeded |{[P] COG0369 Sulfite reductase flavoprotein subunit}: cysJ -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[C] COG2055 Malate/L-lactate dehydrogenases}: ylbC=ybiC=yiaK -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[R] COG1073 Hydrolases of the alpha/beta superfamily}: pldB=ec1788884=ec1787678 -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)#[H] COG1441 O-succinylbenzoate synthase and related enzymes}: purH#dgoA_2=menC=ycjG, {[L] COG0648 Endonuclease IV}: nfo -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0262 Dihydrofolate reductase}: folA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[C] COG0426 Uncharacterized flavoproteins#[C] COG1142 Fe-S-cluster-containing hydrogenase components 2}: ygaK_1#hycB=yffE=yffG_1=hydN=ygfT_1=ygfS=ec1787963 -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0417 DNA-dependent DNA polymerase elongation subunit (family B)#[K] COG0430 RNA phosphate cyclase}: polB#yhgK+J, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[E] COG0002 Acetylglutamate semialdehyde dehydrogenase#[F] COG0005 Purine nucleoside phosphorylase#[S] COG0432 Uncharacterized ACR, YjbQ/UPF0047 family#[E] COG0548 Acetylglutamate kinase#[R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold}: argC#xapA#yjbQ#argA_1=argB#yjfR, {[H] COG0262 Dihydrofolate reductase}: folA -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[G] COG0297 Glycogen synthase}: glgA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0447 Dihydroxynaphthoic acid synthase}: menB, {[L] COG0648 Endonuclease IV}: nfo -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: ycbY_1, {[L] COG0648 Endonuclease IV}: nfo -microaerophilic |Escherichia coli |E |oneneeded |{[C] COG0437 Fe-S-cluster-containing hydrogenase components 1}: hybA=nrfC=fdnH=fdoH=dmsB=ec1787872=ec1787960, {[L] COG0648 Endonuclease IV}: nfo -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[J] COG0565 rRNA methylase}: lasT=ec1788881 -microaerophilic |Escherichia coli |E |oneneeded |{[G] COG0058 Glucan phosphorylase}: glgP=malP -microaerophilic |Escherichia coli |E |oneneeded |{[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]#[E] COG0040 ATP phosphoribosyltransferase (histidine biosynthesis)#[E] COG0077 Prephenate dehydratase#[E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase#[E] COG0107 Imidazoleglycerol-phosphate synthase#[E] COG0118 Glutamine amidotransferase (HisH)#[E] COG0131 Imidazoleglycerol-phosphate dehydratase#[E] COG0137 Argininosuccinate synthase#[E] COG0139 Phosphoribosyl-AMP cyclohydrolase#[E] COG0141 Histidinol dehydrogenase#[E] COG0347 Nitrogen regulatory protein PII#[E] COG0440 Acetolactate synthase, small subunit}: gcl=ilvB=ilvG=ilvI=poxB=ec1788716#hisG#pheA_2#hisA#hisF#hisH#hisB_2#argG#hisI_1# hisD#glnK=glnB#ilvH=ilvN=ilvM, {[H] COG0095 Lipoate-protein ligase A}: lplA -microaerophilic |Escherichia coli |E |oneneeded |{[G] COG0058 Glucan phosphorylase}: glgP=malP, {[R] COG0392 Predicted integral membrane protein}: ybhN -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[R] COG1409 Predicted phosphohydrolases, Icc family}: icc -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0007 Uroporphyrinogen-III methylase#[P] COG0025 Na+/H+ antiporter (eukaryotic type)}: cysG_2#yjcE=ec1787440_1, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[F] COG0207 Thymidylate synthase}: thyA -microaerophilic |Escherichia coli |E |oneneeded |{[O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like#[N] COG2165 General secretion pathway protein G}: ptr#hopG -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[H] COG0262 Dihydrofolate reductase}: folA -microaerophilic |Escherichia coli |E |oneneeded |{[N] COG1459 General secretion pathway protein F}: hopF=hofC -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -microaerophilic |Escherichia coli |E |oneneeded |{[G] COG0296 1,4-alpha-glucan branching enzyme}: glgB, {[R] COG0392 Predicted integral membrane protein}: ybhN -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo, {[G] COG1489 Sugar fermentation stimulation protein (uncharacterized)}: sfsA -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[R] COG2262 GTPases, the HflX family}: hflX -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins#[H] COG1056 Nicotinamide mononucleotide adenylyltransferase}: gadB=gadA#nadR_2, {[H] COG0095 Lipoate-protein ligase A}: lplA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[P] COG1553 Uncharacterized ACR involved in intracellular sulfur reduction}: ychN=yheN -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase#[F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase PurE#[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain#[F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain#[E] COG0065 3-Isopropylmalate dehydratase large subunit#[E] COG0066 3-isopropylmalate dehydratase small subunit#[E] COG0079 Histidinol-phosphate aminotransferase#[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases#[F] COG0150 Phosphoribosylaminoimidazol (AIR) synthetase PurM#[E] COG0160 PLP-dependent aminotransferases#[R] COG0456 Acetyltransferases#[L] COG1082 Predicted endonucleases}: purF#purE#purL_1#purL_2#leuC=ybhJ_1#leuD=ybhJ_2#hisC#mhpF=leuA#purM#argD=goaG=yg jG=cstC=gabT#rimI#ec1787573=yjfW=yiaR=ygbM=gip=yhfP -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[S] COG1690 Uncharacterized ACR, RtcB/UPF0027 family}: rtcB -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0262 Dihydrofolate reductase}: folA, {[H] COG0368 Cobalamin-5-phosphate synthase#[H] COG2038 NaMN:DMB phosphoribosyltransferase (cobalamin biosynthesis enzyme CobT)}: cobS#cobT -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[R] COG1092 Predicted SAM-dependent methyltransferases}: ec1787201=ycbY_2 -microaerophilic |Escherichia coli |E |oneneeded |{[P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase#[R] COG2166 SufE protein probably involved in Fe-S center assembly}: cysQ#ygdK=ynhA -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun, {[P] COG0474 Cation transport ATPases}: mgtA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG0613 Predicted metal-dependent phosphoesterases (PHP family)}: yciV -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG1151 6Fe-6S prismane cluster-containing protein}: ybjW -microaerophilic |Escherichia coli |E |oneneeded |{[P] COG0715 Putative taurine-binding periplasmic protein}: tauA=ycbO -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo, {[E] COG1410 Methionine synthase I, cobalamin-binding domain}: metH_2 -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[S] COG1767 Uncharacterized proteins, CitG homologs}: citG -microaerophilic |Escherichia coli |E |oneneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase NrdD}: nrdD -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[L] COG1199 Rad3-related DNA helicases}: dinG=ec1788110 -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[S] COG1720 Uncharacterized ACR, YaeB/UPF0066 family}: yaeB -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0262 Dihydrofolate reductase}: folA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase}: wecC -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG1534 Predicted RNA-binding protein containing KH domain#[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein MobB}: yhbY#yihC -microaerophilic |Escherichia coli |E |oneneeded |{[C] COG1347 Na+-translocating NADH-quinone reductase, subunit 5#[C] COG2209 Na+-translocating NADH-quinone oxidoreductase, subunit 5 (NqrE)}: ydgQ#ec1787914 -microaerophilic |Escherichia coli |E |oneneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair#[R] COG0431 Predicted flavoprotein}: dinP=umuC#yieF -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)}: aslB=ec1787774 -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[P] COG1118 ABC-type sulfate/molybdenum transport system, ATPase component}: cysA=modC=yabJ -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs}: yhdO=pmbA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG1201 Lhr-like helicases}: lhr -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[S] COG1986 Uncharacterized ACR}: yjjX -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG1988 Predicted membrane-bound metal-dependent hydrolases}: ec1788023=ybcI -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[E] COG0620 Methionine synthase II (cobalamin-independent)}: metE -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA -microaerophilic |Escherichia coli |E |oneneeded |{[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: apaH=pphA=ygbH, {[L] COG0648 Endonuclease IV}: nfo -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[S] COG1944 Uncharacterized ACR}: ycaO -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[P] COG1055 Arsenite permease}: arsB=ec1788992=ec1788993 -microaerophilic |Escherichia coli |E |oneneeded |{[K] COG0425 Predicted transcriptional regulators}: yedF=yeeD=yhhP, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun, {[F] COG0207 Thymidylate synthase}: thyA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[H] COG0611 Thiamine monophosphate kinase}: thiL -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[E] COG0509 Glycine cleavage system H protein (lipoate-binding)}: gcvH -microaerophilic |Escherichia coli |E |oneneeded |{[P] COG0004 Ammonia permeases#[E] COG0067 Glutamate synthetase domain 1#[E] COG0069 Glutamate synthetase domain 2#[E] COG0070 Glutamate synthetase domain 3#[S] COG0391 Uncharacterized ACR, YbhK/UPF0052 family#[H] COG0422 Thiamine biosynthesis protein ThiC#[R] COG0701 Predicted permeases}: amtB#gltB_1#gltB_2#gltB_3#ybhK#thiC#yraQ, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[R] COG1203 Predicted helicases#[F] COG1781 Aspartate carbamoyltransferase regulatory subunit#[C] COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain#[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain}: ygcB#pyrI#fumA_2=fumB_2=ttdB#ttdA=fumB_1=fumA_1 -microaerophilic |Escherichia coli |E |oneneeded |{[E] COG0367 Asparagine synthase (glutamine-hydrolyzing)}: asnB, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun, {[M] COG0562 UDP-galactopyranose mutase}: yefE -microaerophilic |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo, {[P] COG1116 ABC-type nitrate transport system, ATPase component}: tauB=ycbE -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[I] COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)}: yjiL -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1 -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase#[F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase PurE#[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain#[F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain#[E] COG0065 3-Isopropylmalate dehydratase large subunit#[E] COG0066 3-isopropylmalate dehydratase small subunit#[E] COG0079 Histidinol-phosphate aminotransferase#[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases#[F] COG0150 Phosphoribosylaminoimidazol (AIR) synthetase PurM#[E] COG0160 PLP-dependent aminotransferases#[R] COG0456 Acetyltransferases#[L] COG1082 Predicted endonucleases}: purF#purE#purL_1#purL_2#leuC=ybhJ_1#leuD=ybhJ_2#hisC#mhpF=leuA#purM#argD=goaG=yg jG=cstC=gabT#rimI#ec1787573=yjfW=yiaR=ygbM=gip=yhfP -microaerophilic |Escherichia coli |E |oneneeded |{[E] COG0002 Acetylglutamate semialdehyde dehydrogenase#[F] COG0005 Purine nucleoside phosphorylase#[S] COG0432 Uncharacterized ACR, YjbQ/UPF0047 family#[E] COG0548 Acetylglutamate kinase#[R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold}: argC#xapA#yjbQ#argA_1=argB#yjfR, {[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -microaerophilic |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA -microaerophilic |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[H] COG0684 Demethylmenaquinone methyltransferase}: menG -microaerophilic |Escherichia coli |E |oneneeded |{[G] COG0058 Glucan phosphorylase}: glgP=malP -microaerophilic |Escherichia coli |E |oneneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[L] COG0648 Endonuclease IV}: nfo -microaerophilic |Escherichia coli |E |oneneeded |{[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase#[F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase PurE#[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain#[F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain#[E] COG0065 3-Isopropylmalate dehydratase large subunit#[E] COG0066 3-isopropylmalate dehydratase small subunit#[E] COG0079 Histidinol-phosphate aminotransferase#[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases#[F] COG0150 Phosphoribosylaminoimidazol (AIR) synthetase PurM#[E] COG0160 PLP-dependent aminotransferases#[R] COG0456 Acetyltransferases#[L] COG1082 Predicted endonucleases}: purF#purE#purL_1#purL_2#leuC=ybhJ_1#leuD=ybhJ_2#hisC#mhpF=leuA#purM#argD=goaG=yg jG=cstC=gabT#rimI#ec1787573=yjfW=yiaR=ygbM=gip=yhfP, {[H] COG0095 Lipoate-protein ligase A}: lplA -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: dapE=ygeY=argE=ylbB -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0864 Uncharacterized ACR, YhhG family}: yhhG, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[R] COG1203 Predicted helicases#[F] COG1781 Aspartate carbamoyltransferase regulatory subunit#[C] COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain#[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain}: ygcB#pyrI#fumA_2=fumB_2=ttdB#ttdA=fumB_1=fumA_1 -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV, {[K] COG1508 Sigma-54 (RpoN) and related alternative sigma subunuts}: rpoN -aerotolerant |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[O] COG0638 Proteasome protease subunit HslV}: hslV -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG1068 ATP-dependent unnamed protease}: ec1787188, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[R] COG2252 Permeases}: yjcD=ygfR=ygfQ=yicO=yieG -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -aerotolerant |Escherichia coli |E |oneneeded |{[G] COG1312 D-mannonate dehydratase#[KG] COG1349 Transcriptional regulators of sugar metabolism#[K] COG1737 Transcriptional regulators, RpiR family#[G] COG1869 Uncharacterized components of ribose/xylose transport systems#[G] COG2017 Galactose mutarotase and related enzymes#[G] COG2115 Xylose isomerase#[F] COG2233 Xanthine/uracil permeases}: uxuA#glpR=yihW=yjhJ=yhaW=ygbI=fucR=ec1787540#yebK=yjcY=yfeT=yfhH#rbsD=fucU#galM= yihR=yphB#xylA#ycdG=uraA=ygfU=ygfO=yicE=ybbY, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG0814 Amino acid permeases}: sdaC=tnaB=tyrP=yhaO=yqeG=yhjV=mtr, {[S] COG1520 Uncharacterized proteins of WD40-like repeat family}: ec1788859 -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[S] COG1690 Uncharacterized ACR, RtcB/UPF0027 family}: rtcB -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[G] COG0647 Predicted sugar phosphatases of the HAD superfamily}: nagD -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG0421 Spermidine synthase}: speE, {[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB, {[R] COG1201 Lhr-like helicases}: lhr -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0428 Predicted divalent heavy-metal cations transporter}: ygiE, {[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Bacillus subtilis |B |oneneeded |{[P] COG0306 Phosphate permease}: BS_ykaB=BS_ylnA, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BS_yshB -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: cvpA -aerotolerant |Haemophilus influenzae |H |oneneeded |{[P] COG0306 Phosphate permease}: HI1604, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HI1206 -aerotolerant |Treponema pallidum |L |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: TP0522 -aerotolerant |Borrelia burgdorferi |O |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BB0766 -aerotolerant |Helicobacter pylori |U |oneneeded |{[P] COG0306 Phosphate permease}: HP1491, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HP0181 -aerotolerant |Rickettsia prowazekii |X |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: RP033 -aerotolerant |Escherichia coli |E |oneneeded |{[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: kdsB#kdtA#ycaH, {[S] COG1520 Uncharacterized proteins of WD40-like repeat family}: ec1788859 -aerotolerant |Escherichia coli |E |oneneeded |{[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase NrdD}: nrdD, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: yjeK -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[L] COG1570 Exonuclease VII, large subunit}: xseA -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[P] COG1324 Uncharacterized protein CutA involved in tolerance to divalent cations}: cutA -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[C] COG1726 Membrane-bound Fe-S proteins, RfnC family}: ec1787916 -aerotolerant |Escherichia coli |E |oneneeded |{[R] COG1073 Hydrolases of the alpha/beta superfamily}: pldB=ec1788884=ec1787678, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB, {[R] COG2151 Putative aromatic ring hydroxylating enzyme}: ec1787657 -aerotolerant |Escherichia coli |E |oneneeded |{[R] COG0615 Predicted cytidylyltransferases}: ec1789432_2, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[P] COG1528 Ferritin-like protein Rsg}: rsgA=yecI -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[S] COG1739 Uncharacterized ACR, YigZ/UPF0029 family}: yigZ -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1414 Transcriptional regulators, IclR family#[S] COG1490 Uncharacterized ACR}: ec1788131=yagI=iclR=yiaJ=yjhI=ybbU=mhpR#yihZ, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB, {[R] COG1988 Predicted membrane-bound metal-dependent hydrolases}: ec1788023=ybcI -aerotolerant |Escherichia coli |E |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU, {[E] COG1605 Chorismate mutase}: pheA_1=tyrA_1 -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV, {[F] COG0756 dUTPase}: dut -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV, {[S] COG2095 Integral membrane proteins of the MarC family}: ychE=yhgN=ydeB -aerotolerant |Escherichia coli |E |oneneeded |{[H] COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase}: thiD, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB, {[S] COG1767 Uncharacterized proteins, CitG homologs}: citG -aerotolerant |Escherichia coli |E |oneneeded |{[G] COG1015 Phosphopentomutase/predicted phosphoglycerate mutase and related enzymes}: deoB=yhfW, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[C] COG0650 Formate hydrogenlyase subunit 4, HycD}: hyfC=hycD, {[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV, {[R] COG1321 Predicted iron-dependent transcription repressor}: ec1787038 -aerotolerant |Escherichia coli |E |oneneeded |{[I] COG0688 Phosphatidylserine decarboxylase}: psd -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[O] COG1180 Pyruvate-formate lyase-activating enzyme}: pflA=pflC=yjjW=ybiY -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV, {[E] COG1115 Sodium-alanine symporters}: yaaJ -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[S] COG1738 Uncharacterized ACR, YhhQ family}: yhhQ -aerotolerant |Escherichia coli |E |oneneeded |{[J] COG1841 Ribosomal protein L30/L7E}: rpmD, {[C] COG2142 Cytochrome b subunit of fumarate reductase and succinate dehydrogenase}: sdhD -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[S] COG1520 Uncharacterized proteins of WD40-like repeat family}: ec1788859 -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG1520 Uncharacterized proteins of WD40-like repeat family}: ec1788859, {[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: htrB=ddg=msbB -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG0863 Adenine-specific DNA methylase}: yhdJ, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG0417 DNA-dependent DNA polymerase elongation subunit (family B)#[K] COG0430 RNA phosphate cyclase}: polB#yhgK+J, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: dacC=yeeC=dacA=pbpG -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG0367 Asparagine synthase (glutamine-hydrolyzing)}: asnB, {[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[T] COG2204 AAA superfamily ATPases with N-terminal receiver domain}: atoC=glnG=hydG=yfhA -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2}: yaaD=slyD, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[P] COG1553 Uncharacterized ACR involved in intracellular sulfur reduction}: ychN=yheN -aerotolerant |Escherichia coli |E |oneneeded |{[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components#[G] COG1879 Periplasmic sugar-binding proteins}: araH=mglC=rbsC=xylH=yjcV=yjfF=ytfT#rbsB=ytfQ=xylF=yjcX=yphF=mglB=araF, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[P] COG0306 Phosphate permease}: pitA=pitB -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[HC] COG0543 2-Octaprenylphenol hydroxylase and related flavodoxin oxidoreductases}: ubiB, {[O] COG0638 Proteasome protease subunit HslV}: hslV -aerotolerant |Escherichia coli |E |oneneeded |{[M] COG1792 Rod shape-determining protein MreC}: mreC -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[S] COG1720 Uncharacterized ACR, YaeB/UPF0066 family}: yaeB -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG1495 Disulfide bond formation protein DsbB}: dsbB, {[S] COG1520 Uncharacterized proteins of WD40-like repeat family}: ec1788859 -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[C] COG1347 Na+-translocating NADH-quinone reductase, subunit 5#[C] COG2209 Na+-translocating NADH-quinone oxidoreductase, subunit 5 (NqrE)}: ydgQ#ec1787914, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[M] COG1452 Organic solvent tolerance protein OstA}: imp -aerotolerant |Escherichia coli |E |oneneeded |{[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[NT] COG1352 Methylase of chemotaxis methyl-accepting proteins#[NT] COG2201 Chemotaxis response regulator CheB, consists of CheY-like receiver domain and a methylesterase (demethylase) domain}: cheR#cheB -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[J] COG1841 Ribosomal protein L30/L7E}: rpmD -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG0620 Methionine synthase II (cobalamin-independent)}: metE, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV, {[E] COG1114 Branched-chain amino acid permeases}: brnQ -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[S] COG1561 Uncharacterized stress-induced protein, YicC family}: yicC -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB, {[R] COG1534 Predicted RNA-binding protein containing KH domain#[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein MobB}: yhbY#yihC -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB, {[G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes}: yneB=ec1788414 -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB, {[L] COG1199 Rad3-related DNA helicases}: dinG=ec1788110 -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[L] COG2256 Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase}: ycaJ -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase}: nagA=agaA -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1752 Putative phosphoesterases, homologs of neuropathy target esterase}: ychK=yjjU -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG1520 Uncharacterized proteins of WD40-like repeat family}: ec1788859, {[I] COG1607 Acyl-CoA hydrolase}: yciA -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -aerotolerant |Bacillus subtilis |B |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: BS_yqfO, {[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase}: BS_ykuQ -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase}: dapD -aerotolerant |Haemophilus influenzae |H |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: HI0105, {[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase}: HI1634 -aerotolerant |Thermotoga maritima |V |oneneeded |{[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase}: TM1519 -aerotolerant |Rickettsia prowazekii |X |oneneeded |{[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase}: RP194 -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[T] COG1278 Cold shock proteins#[L] COG1722 Exonuclease VII small subunit#[K] COG1758 RNA polymerase-associated protein RpoZ, omega subunit}: cspC=cspB=cspA=cspG=cspE=cspI=cspF#xseB#rpoZ -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases}: tdh=yjjN=gatD=ybdR=rspB=ec1788075=ydjJ, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV, {[L] COG1194 A/G-specific DNA glycosylase}: mutY -aerotolerant |Escherichia coli |E |oneneeded |{[J] COG1841 Ribosomal protein L30/L7E}: rpmD, {[S] COG1881 Uncharacterized ACR, YbhB family}: ybcL=ybhB -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: dapE=ygeY=argE=ylbB -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV, {[H] COG1477 Membrane-associated lipoprotein ApbE involved in thiamine biosynthesis}: yojL -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[L] COG1943 Predicted transposase}: yafM -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[T] COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing)}: csrA -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB, {[P] COG1275 Tellurite resistance protein and related permeases}: tehA -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV, {[N] COG1157 Flagellar ATPase-like component#[N] COG1298 Membrane protein FlhA involved in flagellum assembly#[N] COG1317 Flagellar assembly protein FliH#[N] COG1338 Membrane protein FliP involved in flagellar biogenesis#[N] COG1377 Predicted membrane protein FlhB involved in flagellar biogenesis#[N] COG1536 Flagellar motor switch protein FliG#[N] COG1684 Flagellar biosynthetic protein FliR#[N] COG1766 Flagellar basal body M-ring protein FliF#[N] COG1886 Flagellar motor switch protein FliN#[N] COG1987 Flagellar biosynthesis/export protein FliQ}: fliI#flhA=fhiA#fliH#fliP#flhB#fliG#fliR#fliF#fliN#fliQ -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1862 Uncharacterized secreted proteins, YajC family}: yajC -aerotolerant |Escherichia coli |E |oneneeded |{[R] COG1408 Predicted phosphohydrolases}: yaeI, {[J] COG1841 Ribosomal protein L30/L7E}: rpmD -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG -aerotolerant |Escherichia coli |E |oneneeded |{[J] COG1841 Ribosomal protein L30/L7E}: rpmD -aerotolerant |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[T] COG1734 DnaK suppressor protein DskA}: dksA -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG0560 Phosphoserine phosphatase}: serB, {[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[O] COG0638 Proteasome protease subunit HslV}: hslV -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG1438 Arginine repressor}: argR, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[R] COG1923 Uncharacterized ACR, host factor I protein Hfq}: hfq -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[R] COG2137 Uncharacterized protein RecX}: oraA -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[S] COG1426 Uncharacterized proteins, YfgA family}: yfgA -aerotolerant |Escherichia coli |E |oneneeded |{[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[G] COG1363 Cellulase M and related proteins#[J] COG1514 2'-5' RNA ligase and related enzymes#[R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family}: frvX=yjhO=ec1788727#yadP#wzxC=rfbX -aerotolerant |Escherichia coli |E |oneneeded |{[C] COG1085 Galactose-1-phosphate uridylyltransferase}: galT, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[R] COG1092 Predicted SAM-dependent methyltransferases}: ec1787201=ycbY_2, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[E] COG1027 Aspartate ammonia-lyase#[J] COG1188 Predicted small RNA-binding protein (S4 paralog)#[M] COG1368 Phosphoglycerol transferase MdoB and related proteins, alkaline phosphatase superfamily#[S] COG1576 Uncharacterized ACR}: aspA#yrfH#mdoB#ybeA, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -aerotolerant |Escherichia coli |E |oneneeded |{[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[R] COG1335 Amidases related to nicotinamidase}: ydjB=ycaC=yecD=ec1787246 -aerotolerant |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[ER] COG1387 Histidinol phosphatase and related hydrolases of the PHP family}: ycdX -aerotolerant |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[O] COG1220 ATP-dependent protease HslUV, ATPase subunit HslU/ClpY}: hslU -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV -aerotolerant |Escherichia coli |E |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -aerotolerant |Escherichia coli |E |oneneeded |{[O] COG0638 Proteasome protease subunit HslV}: hslV -Spiral |Escherichia coli |E |oneneeded |{[E] COG0002 Acetylglutamate semialdehyde dehydrogenase#[F] COG0005 Purine nucleoside phosphorylase#[S] COG0432 Uncharacterized ACR, YjbQ/UPF0047 family#[E] COG0548 Acetylglutamate kinase#[R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold}: argC#xapA#yjbQ#argA_1=argB#yjfR, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[S] COG1720 Uncharacterized ACR, YaeB/UPF0066 family}: yaeB -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -Spiral |Escherichia coli |E |oneneeded |{[ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases}: tdh=yjjN=gatD=ybdR=rspB=ec1788075=ydjJ, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins#[H] COG1056 Nicotinamide mononucleotide adenylyltransferase}: gadB=gadA#nadR_2, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[R] COG0434 Predicted TIM-barrel enzyme}: yjhM, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase#[F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase PurE#[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain#[F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain#[E] COG0065 3-Isopropylmalate dehydratase large subunit#[E] COG0066 3-isopropylmalate dehydratase small subunit#[E] COG0079 Histidinol-phosphate aminotransferase#[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases#[F] COG0150 Phosphoribosylaminoimidazol (AIR) synthetase PurM#[E] COG0160 PLP-dependent aminotransferases#[R] COG0456 Acetyltransferases#[L] COG1082 Predicted endonucleases}: purF#purE#purL_1#purL_2#leuC=ybhJ_1#leuD=ybhJ_2#hisC#mhpF=leuA#purM#argD=goaG=yg jG=cstC=gabT#rimI#ec1787573=yjfW=yiaR=ygbM=gip=yhfP -Spiral |Escherichia coli |E |oneneeded |{[P] COG1230 Co/Zn/Cd efflux system component#[S] COG1832 Uncharacterized ACR#[KT] COG1983 Putative stress-responsive transcriptional regulator PspC#[G] COG2182 Maltose-binding periplasmic proteins/domains}: ybgR#ec1787199#pspC#malE, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[E] COG0509 Glycine cleavage system H protein (lipoate-binding)}: gcvH, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[H] COG0029 Aspartate oxidase}: nadB, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[P] COG1275 Tellurite resistance protein and related permeases}: tehA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[R] COG1409 Predicted phosphohydrolases, Icc family}: icc -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[R] COG1201 Lhr-like helicases}: lhr, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[M] COG1091 dTDP-4-dehydrorhamnose reductase}: rfbD, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[M] COG1794 Aspartate racemase}: ygeA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[C] COG2055 Malate/L-lactate dehydrogenases}: ylbC=ybiC=yiaK -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB, {[S] COG1690 Uncharacterized ACR, RtcB/UPF0027 family}: rtcB -Spiral |Escherichia coli |E |oneneeded |{[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase#[E] COG0473 Isopropylmalate dehydrogenase}: purC#yeaU=leuB -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB, {[ER] COG1387 Histidinol phosphatase and related hydrolases of the PHP family}: ycdX -Spiral |Escherichia coli |E |oneneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[H] COG0095 Lipoate-protein ligase A}: lplA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0426 Uncharacterized flavoproteins#[C] COG1142 Fe-S-cluster-containing hydrogenase components 2}: ygaK_1#hycB=yffE=yffG_1=hydN=ygfT_1=ygfS=ec1787963, {[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[C] COG1454 Alcohol dehydrogenase IV}: yiaY=eutG=adhE_2=fucO -Spiral |Escherichia coli |E |oneneeded |{[P] COG1118 ABC-type sulfate/molybdenum transport system, ATPase component}: cysA=modC=yabJ, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[G] COG1554 Trehalose and maltose hydrolases (possible phosphorylases)#[L] COG1961 Site-specific recombinases, DNA invertase Pin homologs}: ycjT#ec1787638=pin=ec1787827 -Spiral |Escherichia coli |E |oneneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF -Spiral |Escherichia coli |E |oneneeded |{[M] COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase}: wecC, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[E] COG0367 Asparagine synthase (glutamine-hydrolyzing)}: asnB, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0712 FoF1-type ATP synthase delta subunit}: atpH, {[G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes}: yneB=ec1788414 -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -Spiral |Escherichia coli |E |oneneeded |{[R] COG0637 Predicted phosphatase/phosphohexomutase#[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase (trmA)}: yqaB=ycjU=yieH=yfbT#trmA=ygcA=ybjF, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[R] COG0392 Predicted integral membrane protein}: ybhN -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[K] COG1695 Predicted transcriptional regulators}: yqjI -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[H] COG0368 Cobalamin-5-phosphate synthase#[H] COG2038 NaMN:DMB phosphoribosyltransferase (cobalamin biosynthesis enzyme CobT)}: cobS#cobT, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[L] COG0648 Endonuclease IV}: nfo -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[R] COG2151 Putative aromatic ring hydroxylating enzyme}: ec1787657 -Spiral |Escherichia coli |E |oneneeded |{[M] COG1088 dTDP-D-glucose 4,6-dehydratase}: rfbB=rffG, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: ycbY_1, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[M] COG2222 Predicted phosphosugar isomerases}: yhfN=yraB -Spiral |Escherichia coli |E |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: yadQ=ec1787876#relE, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily}: ec1787667=yrdA=caiE -Spiral |Escherichia coli |E |oneneeded |{[O] COG0071 Molecular chaperone (small heat shock protein)#[C] COG0651 Formate hydrogenlyase subunit 3, HycC#[S] COG1585 Uncharacterized ACR}: ibpA=ibpB#hyfB=hyfF=hycC#ybbJ, {[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[P] COG1055 Arsenite permease}: arsB=ec1788992=ec1788993, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0281 Malic enzyme}: sfcA=ec1788806_1, {[L] COG0648 Endonuclease IV}: nfo -Spiral |Escherichia coli |E |oneneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[E] COG0620 Methionine synthase II (cobalamin-independent)}: metE -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family}: ec1787242=ec1787735 -Spiral |Escherichia coli |E |oneneeded |{[L] COG0417 DNA-dependent DNA polymerase elongation subunit (family B)#[K] COG0430 RNA phosphate cyclase}: polB#yhgK+J, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0633 Ferredoxin}: fdx=yfaE -Spiral |Escherichia coli |E |oneneeded |{[L] COG1199 Rad3-related DNA helicases}: dinG=ec1788110, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase NrdD}: nrdD -Spiral |Escherichia coli |E |oneneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[J] COG1530 Ribonucleases G and E}: cafA=rne -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[H] COG1893 Ketopantoate reductase PanE/ApbA}: apbA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[R] COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)}: mhpD=ec1787428, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[R] COG1988 Predicted membrane-bound metal-dependent hydrolases}: ec1788023=ybcI -Spiral |Escherichia coli |E |oneneeded |{[S] COG1678 Uncharacterized ACR}: yqgE -Spiral |Escherichia coli |E |oneneeded |{[G] COG0383 Alpha-mannosidase#[H] COG2109 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP}: ybgB#btuR, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) PurT#[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes}: purT#cysH=cysD, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[R] COG1216 Predicted glycosyltransferases}: yefJ, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[G] COG0297 Glycogen synthase}: glgA, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -Spiral |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[R] COG0679 Predicted permeases}: ec1788715 -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[S] COG1859 Uncharacterized ACR}: yjiI -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB, {[G] COG1363 Cellulase M and related proteins#[J] COG1514 2'-5' RNA ligase and related enzymes#[R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family}: frvX=yjhO=ec1788727#yadP#wzxC=rfbX -Spiral |Escherichia coli |E |oneneeded |{[H] COG0611 Thiamine monophosphate kinase}: thiL, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB, {[R] COG1203 Predicted helicases#[F] COG1781 Aspartate carbamoyltransferase regulatory subunit#[C] COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain#[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain}: ygcB#pyrI#fumA_2=fumB_2=ttdB#ttdA=fumB_1=fumA_1 -Spiral |Escherichia coli |E |oneneeded |{[G] COG0647 Predicted sugar phosphatases of the HAD superfamily}: nagD, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[E] COG0002 Acetylglutamate semialdehyde dehydrogenase#[F] COG0005 Purine nucleoside phosphorylase#[S] COG0432 Uncharacterized ACR, YjbQ/UPF0047 family#[E] COG0548 Acetylglutamate kinase#[R] COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold}: argC#xapA#yjbQ#argA_1=argB#yjfR, {[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[M] COG0381 UDP-N-acetylglucosamine 2-epimerase}: wecB, {[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -Spiral |Escherichia coli |E |oneneeded |{[E] COG0685 5,10-methylenetetrahydrofolate reductase}: metF, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[R] COG1611 Predicted Rossmann fold nucleotide-binding protein}: ygdH -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[S] COG1767 Uncharacterized proteins, CitG homologs}: citG -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[C] COG0567 Pyruvate and 2-oxoglutarate dehydrogenases, E1 component}: sucA -Spiral |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA -Spiral |Escherichia coli |E |oneneeded |{[E] COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain#[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase)#[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase#[E] COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain}: gcvP_1#gcvT#yafB=yqhE=ydbC=ec1787936=ec1788081#gcvP_2, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[H] COG0320 Lipoate synthase#[F] COG0590 Cytosine deaminase-related enzymes#[C] COG1294 Cytochrome bd quinol oxidase and cytochrome oxidase complexes, subunit 2}: lipA#yfhC#appB=cydB, {[R] COG0392 Predicted integral membrane protein}: ybhN -Spiral |Escherichia coli |E |oneneeded |{[R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs}: yhdO=pmbA -Spiral |Escherichia coli |E |oneneeded |{[J] COG0689 RNase PH}: rph, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[S] COG1984 Uncharacterized ACR#[S] COG2049 Uncharacterized ACR}: ybgK#ybgJ -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[S] COG2110 An uncharacterized domain related to the C-terminal domain of histone macroH2A1}: ec1787283 -Spiral |Escherichia coli |E |oneneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[S] COG1872 Uncharacterized ACR, YggU family}: yggU -Spiral |Escherichia coli |E |oneneeded |{[R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA}: ec1788583, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[L] COG1515 Deoxyinosine 3'endonuclease (endonuclease V)#[S] COG1801 Uncharacterized ACR}: yjaF#yecE -Spiral |Escherichia coli |E |oneneeded |{[E] COG0549 Carbamate kinase}: yahI=yqeA=ybcF, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[F] COG0213 Thymidine phosphorylase}: deoA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[M] COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes}: rfbC -Spiral |Escherichia coli |E |oneneeded |{[C] COG0712 FoF1-type ATP synthase delta subunit}: atpH -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[R] COG2262 GTPases, the HflX family}: hflX -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[R] COG1534 Predicted RNA-binding protein containing KH domain#[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein MobB}: yhbY#yihC -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[R] COG1092 Predicted SAM-dependent methyltransferases}: ec1787201=ycbY_2, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[E] COG1446 Asparaginase}: ybiK -Spiral |Escherichia coli |E |oneneeded |{[R] COG0392 Predicted integral membrane protein}: ybhN, {[C] COG1271 Cytochrome bd quinol oxidase, subunit 1}: cydA=appC -Spiral |Escherichia coli |E |oneneeded |{[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: apaH=pphA=ygbH, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[O] COG1180 Pyruvate-formate lyase-activating enzyme}: pflA=pflC=yjjW=ybiY -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[G] COG0058 Glucan phosphorylase}: glgP=malP, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[S] COG1444 Uncharacterized ACR}: ypfI -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[S] COG1765 Uncharacterized ACR}: yhfA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis}: yhjO=ycdQ, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[M] COG1807 Uncharacterized protein, affecting LPS biosynthesis}: ec1788591 -Spiral |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[S] COG0393 Uncharacterized ACR, MJ1170 family#[R] COG0433 Predicted ATPase#[C] COG0644 Dehydrogenases (flavoproteins)#[C] COG1032 Fe-S oxidoreductases family 2}: ec1787091#yjgR#fixC=ydiS=yidS=ygcN#ygiR+Q, {[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[S] COG1054 Uncharacterized ACR, YceA family}: yceA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1042 Acyl-CoA synthetases}: yfiQ_1, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[S] COG2105 Uncharacterized ACR, YkqA family}: ytfP -Spiral |Escherichia coli |E |oneneeded |{[C] COG0712 FoF1-type ATP synthase delta subunit}: atpH -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[P] COG1324 Uncharacterized protein CutA involved in tolerance to divalent cations}: cutA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[R] COG1473 Metal-dependent amidohydrolases/aminoacylases}: ydaJ=ec1787598 -Spiral |Escherichia coli |E |oneneeded |{[S] COG1322 Uncharacterized BCR, YigN family}: yigN -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase#[E] COG0473 Isopropylmalate dehydrogenase}: purC#yeaU=leuB -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[R] COG0400 Carboxylesterases}: ypfH -Spiral |Escherichia coli |E |oneneeded |{[C] COG0650 Formate hydrogenlyase subunit 4, HycD}: hyfC=hycD, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG0371 Glycerol dehydrogenase}: gldA=ybdH, {[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA, {[E] COG1703 Predicted GTPase (G3E family); experimentally characterized as ArgK, kinase of periplasmic Arg,Orn-binding proteins#[I] COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit#[I] COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)}: ygfD#sbm_1#sbm_2 -Spiral |Escherichia coli |E |oneneeded |{[C] COG1085 Galactose-1-phosphate uridylyltransferase}: galT, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[O] COG0071 Molecular chaperone (small heat shock protein)#[C] COG0651 Formate hydrogenlyase subunit 3, HycC#[S] COG1585 Uncharacterized ACR}: ibpA=ibpB#hyfB=hyfF=hycC#ybbJ, {[H] COG0262 Dihydrofolate reductase}: folA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[M] COG1209 dTDP-glucose pyrophosphorylase}: rfbA=rffH, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -Spiral |Escherichia coli |E |oneneeded |{[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase#[E] COG0473 Isopropylmalate dehydrogenase}: purC#yeaU=leuB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[K] COG1695 Predicted transcriptional regulators}: yqjI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[G] COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases#[P] COG1535 2,3-Dihydro-2,3 dihydroxybenzoate synthase (isochorismate synthase)#[N] COG1705 Flagellar biosynthesis protein FlgJ, probable N-acetylmuramidase#[P] COG1785 Alkaline phosphatase#[E] COG1897 Homoserine trans-succinylase#[G] COG1904 Glucuronate isomerase#[K] COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding)#[T] COG1956 GAF domain-containing proteins#[C] COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenasefamily#[G] COG2160 L-arabinose isomerase}: celF=melA=glvG#entB#flgJ#phoA#metA#uxaC#ygcP#ec1788136#yqhD#araA -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[L] COG1330 Exonuclease V gamma subunit, RecC}: recC -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG1881 Uncharacterized ACR, YbhB family}: ybcL=ybhB, {[R] COG2252 Permeases}: yjcD=ygfR=ygfQ=yicO=yieG -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1738 Uncharacterized ACR, YhhQ family}: yhhQ -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[G] COG1626 Neutral trehalase}: treA=treF -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[H] COG1477 Membrane-associated lipoprotein ApbE involved in thiamine biosynthesis}: yojL -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase}: nagA=agaA -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[G] COG1363 Cellulase M and related proteins#[J] COG1514 2'-5' RNA ligase and related enzymes#[R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family}: frvX=yjhO=ec1788727#yadP#wzxC=rfbX -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[N] COG2063 Flagellar basal body L-ring protein FlgH}: flgH -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1720 Uncharacterized ACR, YaeB/UPF0066 family}: yaeB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[K] COG1414 Transcriptional regulators, IclR family#[S] COG1490 Uncharacterized ACR}: ec1788131=yagI=iclR=yiaJ=yjhI=ybbU=mhpR#yihZ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[NT] COG1352 Methylase of chemotaxis methyl-accepting proteins#[NT] COG2201 Chemotaxis response regulator CheB, consists of CheY-like receiver domain and a methylesterase (demethylase) domain}: cheR#cheB -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[R] COG2252 Permeases}: yjcD=ygfR=ygfQ=yicO=yieG -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG1454 Alcohol dehydrogenase IV}: yiaY=eutG=adhE_2=fucO -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1561 Uncharacterized stress-induced protein, YicC family}: yicC -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[P] COG1553 Uncharacterized ACR involved in intracellular sulfur reduction}: ychN=yheN -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG1085 Galactose-1-phosphate uridylyltransferase}: galT -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[E] COG1605 Chorismate mutase}: pheA_1=tyrA_1 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[I] COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)}: yjiL -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1611 Predicted Rossmann fold nucleotide-binding protein}: ygdH -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[R] COG1335 Amidases related to nicotinamidase}: ydjB=ycaC=yecD=ec1787246 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[E] COG1027 Aspartate ammonia-lyase#[J] COG1188 Predicted small RNA-binding protein (S4 paralog)#[M] COG1368 Phosphoglycerol transferase MdoB and related proteins, alkaline phosphatase superfamily#[S] COG1576 Uncharacterized ACR}: aspA#yrfH#mdoB#ybeA -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[C] COG1620 L-lactate permease}: yghK=lldP -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[N] COG1706 Flagellar basal-body P-ring protein FlgI}: flgI -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[K] COG1802 Transcriptional regulators, GntR family}: ec1787722=yjjM=ydfH=ygaE -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase NrdD}: nrdD -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG2151 Putative aromatic ring hydroxylating enzyme}: ec1787657 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases}: tdh=yjjN=gatD=ybdR=rspB=ec1788075=ydjJ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1690 Uncharacterized ACR, RtcB/UPF0027 family}: rtcB -Pleomorphic |Escherichia coli |E |oneneeded |{[E] COG0560 Phosphoserine phosphatase}: serB, {[N] COG1157 Flagellar ATPase-like component#[N] COG1298 Membrane protein FlhA involved in flagellum assembly#[N] COG1317 Flagellar assembly protein FliH#[N] COG1338 Membrane protein FliP involved in flagellar biogenesis#[N] COG1377 Predicted membrane protein FlhB involved in flagellar biogenesis#[N] COG1536 Flagellar motor switch protein FliG#[N] COG1684 Flagellar biosynthetic protein FliR#[N] COG1766 Flagellar basal body M-ring protein FliF#[N] COG1886 Flagellar motor switch protein FliN#[N] COG1987 Flagellar biosynthesis/export protein FliQ}: fliI#flhA=fhiA#fliH#fliP#flhB#fliG#fliR#fliF#fliN#fliQ -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[P] COG0428 Predicted divalent heavy-metal cations transporter}: ygiE -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[E] COG0620 Methionine synthase II (cobalamin-independent)}: metE -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[L] COG2256 Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase}: ycaJ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[R] COG2252 Permeases}: yjcD=ygfR=ygfQ=yicO=yieG -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[E] COG1125 ABC-type proline/glycine betaine transport systems, ATPase components#[E] COG1174 Proline/glycine betaine ABC-type transport systems, permease components}: yehX=proV#proW=yehY=yehW -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1242 Uncharacterized FeS oxidoreductases}: yhcC -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[C] COG1726 Membrane-bound Fe-S proteins, RfnC family}: ec1787916 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1073 Hydrolases of the alpha/beta superfamily}: pldB=ec1788884=ec1787678 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[E] COG1438 Arginine repressor}: argR -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family#[C] COG2025 Electron transfer flavoprotein alpha-subunit#[C] COG2086 Electron transfer flavoprotein beta-subunit}: nemA=ygjL_1#ydiR=fixB=ygcQ#ydiQ=fixA=ygcR -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1811 Uncharacterized membrane protein, possible Na+ channel or pump}: yqgA -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1765 Uncharacterized ACR}: yhfA -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[L] COG1943 Predicted transposase}: yafM -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: yjeK -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[P] COG1528 Ferritin-like protein Rsg}: rsgA=yecI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[P] COG1230 Co/Zn/Cd efflux system component#[S] COG1832 Uncharacterized ACR#[KT] COG1983 Putative stress-responsive transcriptional regulator PspC#[G] COG2182 Maltose-binding periplasmic proteins/domains}: ybgR#ec1787199#pspC#malE -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[N] COG1256 Flagellar hook-associated protein FlgK#[N] COG1291 Flagellar motor component MotA#[N] COG1344 Flagellin and related hook-associated protein FlgL#[N] COG1345 Flagellar hook-associated protein FliD#[N] COG1516 Flagellar protein FliS#[N] COG1558 Flagellar basal body rod protein FlgC#[N] COG1580 Membrane-associated flagellar protein FliL#[N] COG1677 Flagellar hook-basal body protein FliE#[N] COG1749 Flagellar basal body and hook proteins#[N] COG1815 Flagellar basal body protein FlgB#[N] COG1843 Flagellar hook capping protein FlgD#[N] COG1868 Flagellar motor switch protein FliM}: flgK#motA#fliC=flgL#fliD#fliS#flgC#fliL#fliE#flgE=flgG=flgF#flgB#flgD#fliM -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[G] COG1482 Phosphomannose isomerase}: manA -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1739 Uncharacterized ACR, YigZ/UPF0029 family}: yigZ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[H] COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase}: thiD -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG0650 Formate hydrogenlyase subunit 4, HycD}: hyfC=hycD -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components#[G] COG1879 Periplasmic sugar-binding proteins}: araH=mglC=rbsC=xylH=yjcV=yjfF=ytfT#rbsB=ytfQ=xylF=yjcX=yphF=mglB=araF -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[G] COG1312 D-mannonate dehydratase#[KG] COG1349 Transcriptional regulators of sugar metabolism#[K] COG1737 Transcriptional regulators, RpiR family#[G] COG1869 Uncharacterized components of ribose/xylose transport systems#[G] COG2017 Galactose mutarotase and related enzymes#[G] COG2115 Xylose isomerase#[F] COG2233 Xanthine/uracil permeases}: uxuA#glpR=yihW=yjhJ=yhaW=ygbI=fucR=ec1787540#yebK=yjcY=yfeT=yfhH#rbsD=fucU#galM= yihR=yphB#xylA#ycdG=uraA=ygfU=ygfO=yicE=ybbY -Pleomorphic |Escherichia coli |E |oneneeded |{[N] COG1157 Flagellar ATPase-like component#[N] COG1298 Membrane protein FlhA involved in flagellum assembly#[N] COG1317 Flagellar assembly protein FliH#[N] COG1338 Membrane protein FliP involved in flagellar biogenesis#[N] COG1377 Predicted membrane protein FlhB involved in flagellar biogenesis#[N] COG1536 Flagellar motor switch protein FliG#[N] COG1684 Flagellar biosynthetic protein FliR#[N] COG1766 Flagellar basal body M-ring protein FliF#[N] COG1886 Flagellar motor switch protein FliN#[N] COG1987 Flagellar biosynthesis/export protein FliQ}: fliI#flhA=fhiA#fliH#fliP#flhB#fliG#fliR#fliF#fliN#fliQ -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[N] COG1157 Flagellar ATPase-like component#[N] COG1298 Membrane protein FlhA involved in flagellum assembly#[N] COG1317 Flagellar assembly protein FliH#[N] COG1338 Membrane protein FliP involved in flagellar biogenesis#[N] COG1377 Predicted membrane protein FlhB involved in flagellar biogenesis#[N] COG1536 Flagellar motor switch protein FliG#[N] COG1684 Flagellar biosynthetic protein FliR#[N] COG1766 Flagellar basal body M-ring protein FliF#[N] COG1886 Flagellar motor switch protein FliN#[N] COG1987 Flagellar biosynthesis/export protein FliQ}: fliI#flhA=fhiA#fliH#fliP#flhB#fliG#fliR#fliF#fliN#fliQ -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0428 Predicted divalent heavy-metal cations transporter}: ygiE -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[R] COG2252 Permeases}: yjcD=ygfR=ygfQ=yicO=yieG -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[ER] COG1387 Histidinol phosphatase and related hydrolases of the PHP family}: ycdX -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[L] COG1515 Deoxyinosine 3'endonuclease (endonuclease V)#[S] COG1801 Uncharacterized ACR}: yjaF#yecE -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[O] COG1180 Pyruvate-formate lyase-activating enzyme}: pflA=pflC=yjjW=ybiY -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[G] COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases#[E] COG2008 Threonine aldolase}: yicI=yihQ#ybjU -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG2110 An uncharacterized domain related to the C-terminal domain of histone macroH2A1}: ec1787283 -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[S] COG1652 Uncharacterized BCR#[S] COG1671 Uncharacterized BCR, YaiI/YqxD family}: ygaU#yaiI -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[N] COG1388 LysM-repeat proteins and domains}: dniR_2 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG1254 Acylphosphatases}: ec1787203 -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG1347 Na+-translocating NADH-quinone reductase, subunit 5#[C] COG2209 Na+-translocating NADH-quinone oxidoreductase, subunit 5 (NqrE)}: ydgQ#ec1787914 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[M] COG2222 Predicted phosphosugar isomerases}: yhfN=yraB -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[T] COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing)}: csrA -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1321 Predicted iron-dependent transcription repressor}: ec1787038 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1011 Predicted hydrolases of the HAD superfamily}: yjjG=yigB=yrfG=yihX -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1092 Predicted SAM-dependent methyltransferases}: ec1787201=ycbY_2 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[P] COG2168 Uncharacterized protein DsrH, involved in oxidation of intracellular sulfur}: yheL -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG2137 Uncharacterized protein RecX}: oraA -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[F] COG1001 Adenine deaminase}: yicP -Pleomorphic |Escherichia coli |E |oneneeded |{[K] COG1508 Sigma-54 (RpoN) and related alternative sigma subunuts}: rpoN -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1203 Predicted helicases#[F] COG1781 Aspartate carbamoyltransferase regulatory subunit#[C] COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain#[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain}: ygcB#pyrI#fumA_2=fumB_2=ttdB#ttdA=fumB_1=fumA_1 -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[E] COG0421 Spermidine synthase}: speE -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[S] COG1288 Uncharacterized membrane protein#[R] COG1823 Predicted Na+-dicarboxylate symporter#[E] COG2195 Di- and tripeptidases}: yfcC#ec1788024#pepD=pepT -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[H] COG0846 Putative NaMN:DMB phosphoribosyltransferase (CobB)/SIR2 transcriptional regulator}: cobB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[L] COG0863 Adenine-specific DNA methylase}: yhdJ -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1923 Uncharacterized ACR, host factor I protein Hfq}: hfq -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1151 6Fe-6S prismane cluster-containing protein}: ybjW -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[HC] COG0543 2-Octaprenylphenol hydroxylase and related flavodoxin oxidoreductases}: ubiB -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 -Pleomorphic |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[G] COG1440 Phosphotransferase system cellobiose-specific component IIB#[G] COG1447 Phosphotransferase system cellobiose-specific component IIA#[G] COG1455 Phosphotransferase system cellobiose-specific component IIC#[E] COG2113 Periplasmic binding protein of proline/glycine betaine ABC-type transport system}: celA#celC#celB#proX -Pleomorphic |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[G] COG1015 Phosphopentomutase/predicted phosphoglycerate mutase and related enzymes}: deoB=yhfW -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB -Pleomorphic |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[R] COG1272 Predicted membrane proteins, hemolysin III homologs#[C] COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs#[C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs}: yqfA#ygeT=ygfM=yagS#yagT=ygfN_1=ygeU -Mesophile |Archaeoglobus fulgidus |A |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: AF1506#AF0910#AF0700#AF0338=AF0659=AF0996=AF1049, {[T] COG0467 RecA-superfamily ATPases implicated in signal transduction}: AF0351=AF0354=AF0452=AF0518=AF0775=AF0795=AF1050 -Mesophile |Synechocystis |C |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: slr0549#slr0550#slr0657#slr0063=slr0079=sll1533=slr0161, {[T] COG0467 RecA-superfamily ATPases implicated in signal transduction}: slr0758=sll1595=slr1942 -Mesophile |Pyrococcus horikoshii |K |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: PH1088#PH0847#PH0858=PH1086#PH0557=PH0650_1=PH1309=PH0650_3, {[T] COG0467 RecA-superfamily ATPases implicated in signal transduction}: PH0186=PH0187=PH0284=PH0556=PH0833=PH1025=PH1120 -Mesophile |Methanococcus jannaschii |M |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: MJ0205#MJ0244#MJ0571#MJ0900=MJ1287=MJ0781_1=MJ0781_3=MJ1288, {[T] COG0467 RecA-superfamily ATPases implicated in signal transduction}: MJ0899=MJ1359=MJ1241 -Mesophile |Methanobacterium thermoautotrophicum |T |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: MTH799#MTH801#MTH802#MTH1702, {[T] COG0467 RecA-superfamily ATPases implicated in signal transduction}: MTH1094=MTH1498=MTH439=MTH592=MTH593=MTH594_1 -Mesophile |Thermotoga maritima |V |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: TM1523#TM1521#TM1518=TM0547_2#TM1362=TM0837, {[T] COG0467 RecA-superfamily ATPases implicated in signal transduction}: TM0370 -Thermophile |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thermophile |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thermophile |Escherichia coli |E |oneneeded |{[C] COG0822 NifU homologs involved in Fe-S cluster formation}: ec1788878, {[R] COG2252 Permeases}: yjcD=ygfR=ygfQ=yicO=yieG -Thermophile |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thermophile |Escherichia coli |E |oneneeded |{[C] COG0822 NifU homologs involved in Fe-S cluster formation}: ec1788878 -Thermophile |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA -Thermophile |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[P] COG1275 Tellurite resistance protein and related permeases}: tehA -Thermophile |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA -Thermophile |Escherichia coli |E |oneneeded |{[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: dapE=ygeY=argE=ylbB, {[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)#[G] COG1925 Phosphotransferase system, HPr-related proteins}: ptsN=hrsA_1=frvA=ptxA=fruB_1=mtlA_2=frvR_2#fruB_2=ptsH=ycgC_1=ptsO=ec1788726_1 -Thermophile |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thermophile |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thermophile |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: dacC=yeeC=dacA=pbpG -Thermophile |Escherichia coli |E |oneneeded |{[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: dapE=ygeY=argE=ylbB -Thermophile |Escherichia coli |E |oneneeded |{[E] COG0421 Spermidine synthase}: speE, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thermophile |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -Thermophile |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thermophile |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk, {[S] COG2095 Integral membrane proteins of the MarC family}: ychE=yhgN=ydeB -Thermophile |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[I] COG0736 Acyl-carrier protein synthase}: dpj -Thermophile |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -Thermophile |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: dapE=ygeY=argE=ylbB -Thermophile |Escherichia coli |E |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: dpj -Thermophile |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk, {[C] COG1042 Acyl-CoA synthetases}: yfiQ_1 -Thermophile |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thermophile |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[M] COG1792 Rod shape-determining protein MreC}: mreC -Thermophile |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -Endospores |Escherichia coli |E |oneneeded |{[C] COG0221 Inorganic pyrophosphatase}: ppa, {[P] COG0530 Ca2+/Na+ antiporter}: yrbG -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0551 Zn-finger domain associated with topoisomerase type I}: topA_2=yrdD, {[O] COG0638 Proteasome protease subunit HslV}: hslV -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk, {[S] COG0864 Uncharacterized ACR, YhhG family}: yhhG -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[H] COG0301 Enzyme of thiamine biosynthesis (ThiI); contains a PP-loop superfamily ATPase domain and an uncharacterized conserved domain}: yajK, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[I] COG0736 Acyl-carrier protein synthase}: dpj -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk, {[R] COG1988 Predicted membrane-bound metal-dependent hydrolases}: ec1788023=ybcI -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk, {[G] COG1015 Phosphopentomutase/predicted phosphoglycerate mutase and related enzymes}: deoB=yhfW -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[P] COG0306 Phosphate permease}: pitA=pitB, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[E] COG0560 Phosphoserine phosphatase}: serB -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: dpj -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[I] COG0736 Acyl-carrier protein synthase}: dpj -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[C] COG0567 Pyruvate and 2-oxoglutarate dehydrogenases, E1 component}: sucA, {[R] COG1418 Uncharacterized hydrolases of the HD superfamily}: yedJ -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: dpj, {[S] COG1767 Uncharacterized proteins, CitG homologs}: citG -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[P] COG0428 Predicted divalent heavy-metal cations transporter}: ygiE, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: ec1788878 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[F] COG0756 dUTPase}: dut, {[R] COG1418 Uncharacterized hydrolases of the HD superfamily}: yedJ -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[R] COG1321 Predicted iron-dependent transcription repressor}: ec1787038 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component#[EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component}: dppD=oppD=sapD=ec1787759=nikD#oppF=dppF=ec1787758=sapF=nikE -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0551 Zn-finger domain associated with topoisomerase type I}: topA_2=yrdD, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: potA=potG=ec1787712#potB=potH=ec1787713#potC=potI=ec1787714, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[F] COG1435 Thymidine kinase}: tdk, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0417 DNA-dependent DNA polymerase elongation subunit (family B)#[K] COG0430 RNA phosphate cyclase}: polB#yhgK+J, {[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[HC] COG0543 2-Octaprenylphenol hydroxylase and related flavodoxin oxidoreductases}: ubiB -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[F] COG0295 Cytidine deaminase#[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)}: cdd#fruK=pfkB, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0551 Zn-finger domain associated with topoisomerase type I}: topA_2=yrdD -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0648 Endonuclease IV}: nfo, {[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: dpj, {[R] COG1534 Predicted RNA-binding protein containing KH domain#[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein MobB}: yhbY#yihC -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[E] COG0367 Asparagine synthase (glutamine-hydrolyzing)}: asnB, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)#[G] COG1925 Phosphotransferase system, HPr-related proteins}: ptsN=hrsA_1=frvA=ptxA=fruB_1=mtlA_2=frvR_2#fruB_2=ptsH=ycgC_1=ptsO=ec1788726_1 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk, {[R] COG1203 Predicted helicases#[F] COG1781 Aspartate carbamoyltransferase regulatory subunit#[C] COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain#[C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain}: ygcB#pyrI#fumA_2=fumB_2=ttdB#ttdA=fumB_1=fumA_1 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0551 Zn-finger domain associated with topoisomerase type I}: topA_2=yrdD, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component#[EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component}: dppD=oppD=sapD=ec1787759=nikD#oppF=dppF=ec1787758=sapF=nikE, {[J] COG1841 Ribosomal protein L30/L7E}: rpmD -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[R] COG1418 Uncharacterized hydrolases of the HD superfamily}: yedJ, {[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: htrB=ddg=msbB -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[H] COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase}: thiD, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[O] COG1180 Pyruvate-formate lyase-activating enzyme}: pflA=pflC=yjjW=ybiY -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[R] COG0615 Predicted cytidylyltransferases}: ec1789432_2, {[I] COG0736 Acyl-carrier protein synthase}: dpj -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[H] COG0301 Enzyme of thiamine biosynthesis (ThiI); contains a PP-loop superfamily ATPase domain and an uncharacterized conserved domain}: yajK, {[I] COG0736 Acyl-carrier protein synthase}: dpj -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0551 Zn-finger domain associated with topoisomerase type I}: topA_2=yrdD -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: dpj -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG1570 Exonuclease VII, large subunit}: xseA -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[S] COG1520 Uncharacterized proteins of WD40-like repeat family}: ec1788859 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[R] COG1418 Uncharacterized hydrolases of the HD superfamily}: yedJ, {[S] COG1678 Uncharacterized ACR}: yqgE -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component#[EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component}: dppD=oppD=sapD=ec1787759=nikD#oppF=dppF=ec1787758=sapF=nikE, {[S] COG1520 Uncharacterized proteins of WD40-like repeat family}: ec1788859 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[E] COG0620 Methionine synthase II (cobalamin-independent)}: metE -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[H] COG0301 Enzyme of thiamine biosynthesis (ThiI); contains a PP-loop superfamily ATPase domain and an uncharacterized conserved domain}: yajK, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[C] COG0822 NifU homologs involved in Fe-S cluster formation}: ec1788878, {[R] COG1011 Predicted hydrolases of the HAD superfamily}: yjjG=yigB=yrfG=yihX -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[C] COG0584 Glycerophosphoryl diester phosphodiesterase}: ugpQ=glpQ, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[O] COG0638 Proteasome protease subunit HslV}: hslV -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[I] COG0688 Phosphatidylserine decarboxylase}: psd -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase}: hpt, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk, {[G] COG1363 Cellulase M and related proteins#[J] COG1514 2'-5' RNA ligase and related enzymes#[R] COG2244 Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family}: frvX=yjhO=ec1788727#yadP#wzxC=rfbX -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[R] COG1201 Lhr-like helicases}: lhr -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[R] COG0622 Predicted phosphoesterase}: yfcE, {[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: dpj, {[S] COG1720 Uncharacterized ACR, YaeB/UPF0066 family}: yaeB -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0551 Zn-finger domain associated with topoisomerase type I}: topA_2=yrdD, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: dacC=yeeC=dacA=pbpG -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk, {[G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes}: yneB=ec1788414 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[H] COG0262 Dihydrofolate reductase}: folA, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[ER] COG1387 Histidinol phosphatase and related hydrolases of the PHP family}: ycdX -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[H] COG0301 Enzyme of thiamine biosynthesis (ThiI); contains a PP-loop superfamily ATPase domain and an uncharacterized conserved domain}: yajK, {[S] COG1862 Uncharacterized secreted proteins, YajC family}: yajC -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: dpj, {[O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2}: yaaD=slyD -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: ec1788878 -Thylakoids#-oxygenic photosynthesis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[S] COG1690 Uncharacterized ACR, RtcB/UPF0027 family}: rtcB -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1 -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[S] COG2215 Predicted membrane protein}: yohM -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1, {[F] COG1816 Adenosine deaminase}: add -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[E] COG0710 3-dehydroquinate dehydratase}: aroD -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[E] COG0710 3-dehydroquinate dehydratase}: aroD, {[N] COG1292 Choline-glycine betaine transporter}: betT=yeaV=caiT -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[F] COG1001 Adenine deaminase}: yicP -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1, {[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1, {[E] COG1114 Branched-chain amino acid permeases}: brnQ -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1 -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1, {[S] COG1283 Uncharacterized membrane protein}: yjbB -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[H] COG1541 Coenzyme F390 synthetase}: ec1787664 -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[S] COG1986 Uncharacterized ACR}: yjjX -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[E] COG0710 3-dehydroquinate dehydratase}: aroD, {[R] COG1272 Predicted membrane proteins, hemolysin III homologs#[C] COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs#[C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs}: yqfA#ygeT=ygfM=yagS#yagT=ygfN_1=ygeU -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1, {[C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs}: ygeS=ygfN_2=yagR -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1 -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1, {[G] COG1626 Neutral trehalase}: treA=treF -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA -acidophile |Escherichia coli |E |oneneeded |{[C] COG1526 Uncharacterized protein FdhD/NarQ required for formate dehydrogenase activity}: fdhD -acidophile |Escherichia coli |E |oneneeded |{[E] COG0710 3-dehydroquinate dehydratase}: aroD, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[E] COG0710 3-dehydroquinate dehydratase}: aroD, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[S] COG1288 Uncharacterized membrane protein#[R] COG1823 Predicted Na+-dicarboxylate symporter#[E] COG2195 Di- and tripeptidases}: yfcC#ec1788024#pepD=pepT -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[E] COG0710 3-dehydroquinate dehydratase}: aroD -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[E] COG0710 3-dehydroquinate dehydratase}: aroD, {[H] COG1072 Panthothenate kinase#[E] COG1168 PLP-dependent aminotransferases, MalY/PatB family#[S] COG1660 Uncharacterized BCR, YhbJ/UPF0042 family#[S] COG1666 Uncharacterized BCR, YajQ family#[R] COG2132 Putative multicopper oxidases#[D] COG2177 Cell division protein FtsX#[K] COG2186 Transcriptional regulators, FadR family#[S] COG2258 Uncharacterized BCR, YiiM family#[S] COG2259 Predicted membrane protein}: coaA=yggC#malY#yhbJ#yajQ#yacK=sufI#ftsX#exuR=uxuR=yhcK=lldR=fadR=glcC=pdhR#yiiM# yqjF=yphA -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[C] COG1882 Pyruvate-formate lyase#[R] COG2005 N-terminal domain of molybdenum-binding protein ModE}: pflD=pflB=yhaS=ybiW=yfiD#modE -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[R] COG2183 Predicted RNA binding protein, contains S1 domain}: yhgF -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[E] COG0710 3-dehydroquinate dehydratase}: aroD, {[R] COG1248 Uncharacterized proteins with the alpha/beta hydrolase fold#[OT] COG1391 Glutamine synthetase adenylyltransferase GlnE#[I] COG1946 Acyl-CoA thioesterase#[F] COG1949 Oligoribonuclease (3'->5' exoribonuclease)}: yfbB=ybfF#glnE#tesB#yjeR -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1 -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[O] COG1397 ADP-ribosylglycohydrolase#[E] COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB}: ec1788416#yjiM -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1, {[L] COG1330 Exonuclease V gamma subunit, RecC}: recC -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[S] COG1652 Uncharacterized BCR#[S] COG1671 Uncharacterized BCR, YaiI/YqxD family}: ygaU#yaiI -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1 -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[E] COG0710 3-dehydroquinate dehydratase}: aroD -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[C] COG1526 Uncharacterized protein FdhD/NarQ required for formate dehydrogenase activity}: fdhD -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[C] COG1866 Phosphoenolpyruvate carboxykinase#[HE] COG1932 Phosphoserine aminotransferase#[P] COG2116 Formate/nitrite family of transporters}: pckA#serC#focA=focB=yfdC=nirC -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1, {[N] COG1388 LysM-repeat proteins and domains}: dniR_2 -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[C] COG1526 Uncharacterized protein FdhD/NarQ required for formate dehydrogenase activity}: fdhD -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[H] COG0684 Demethylmenaquinone methyltransferase}: menG -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[L] COG1425 Predicted transposase#[C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase}: yagA#yfdE=ec1788717=caiB -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[KH] COG1654 Biotin operon repressor}: birA_1 -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[E] COG2030 Monoamine oxidase#[R] COG2041 Uncharacterized enzymes, related to nitrate reductase#[C] COG2181 Nitrate reductase gamma subunit}: maoC_2#ec1788282#narI=narV -acidophile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[R] COG0655 Multimeric flavodoxin WrbA#[H] COG1648 Precorrin-2 dehydrogenase}: wrbA#cysG_1 -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[G] COG1440 Phosphotransferase system cellobiose-specific component IIB#[G] COG1447 Phosphotransferase system cellobiose-specific component IIA#[G] COG1455 Phosphotransferase system cellobiose-specific component IIC#[E] COG2113 Periplasmic binding protein of proline/glycine betaine ABC-type transport system}: celA#celC#celB#proX -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 -acidophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like#[N] COG2165 General secretion pathway protein G}: ptr#hopG, {[C] COG1526 Uncharacterized protein FdhD/NarQ required for formate dehydrogenase activity}: fdhD -alkaliphile |Escherichia coli |E |oneneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[R] COG1201 Lhr-like helicases}: lhr -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[R] COG1988 Predicted membrane-bound metal-dependent hydrolases}: ec1788023=ybcI -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG1114 Branched-chain amino acid permeases}: brnQ, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG1115 Sodium-alanine symporters}: yaaJ, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[J] COG0689 RNase PH}: rph -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: dacC=yeeC=dacA=pbpG -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[C] COG1620 L-lactate permease}: yghK=lldP -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[D] COG2184 Fic protein involved in cell division}: fic -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: kdsB#kdtA#ycaH -alkaliphile |Escherichia coli |E |oneneeded |{[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[F] COG0756 dUTPase}: dut -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[R] COG2050 Uncharacterized protein PaaI, possibly involved in aromatic compounds catabolism}: ec1787662=ybdB=ec1787976=yigI -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[T] COG1734 DnaK suppressor protein DskA}: dksA -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[S] COG1984 Uncharacterized ACR#[S] COG2049 Uncharacterized ACR}: ybgK#ybgJ -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[T] COG2204 AAA superfamily ATPases with N-terminal receiver domain}: atoC=glnG=hydG=yfhA -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[R] COG1248 Uncharacterized proteins with the alpha/beta hydrolase fold#[OT] COG1391 Glutamine synthetase adenylyltransferase GlnE#[I] COG1946 Acyl-CoA thioesterase#[F] COG1949 Oligoribonuclease (3'->5' exoribonuclease)}: yfbB=ybfF#glnE#tesB#yjeR, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[S] COG1881 Uncharacterized ACR, YbhB family}: ybcL=ybhB -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[M] COG1452 Organic solvent tolerance protein OstA}: imp -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[C] COG1882 Pyruvate-formate lyase#[R] COG2005 N-terminal domain of molybdenum-binding protein ModE}: pflD=pflB=yhaS=ybiW=yfiD#modE -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG1485 Predicted ATPase#[E] COG1770 Protease II (serine protease PtrB)#[R] COG2071 Predicted glutamine amidotransferases}: yhcM#ptrB#ycjL -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG1288 Uncharacterized membrane protein#[R] COG1823 Predicted Na+-dicarboxylate symporter#[E] COG2195 Di- and tripeptidases}: yfcC#ec1788024#pepD=pepT, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: htrB=ddg=msbB -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[C] COG1526 Uncharacterized protein FdhD/NarQ required for formate dehydrogenase activity}: fdhD -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0560 Phosphoserine phosphatase}: serB, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[S] COG2215 Predicted membrane protein}: yohM -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1729 Uncharacterized BCR#[C] COG2009 Cytochrome b subunit of succinate dehydrogenase#[H] COG2227 2-Octaprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase UbiG/COQ3}: ybgF#sdhC#ubiG -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[S] COG1767 Uncharacterized proteins, CitG homologs}: citG -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1872 Uncharacterized ACR, YggU family}: yggU -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG1048 Aconitase A}: acnA -alkaliphile |Escherichia coli |E |oneneeded |{[I] COG0688 Phosphatidylserine decarboxylase}: psd -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[E] COG1921 Selenocysteine synthase [L-seryl-tRNA(Ser) selenium transferase]}: selA -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0814 Amino acid permeases}: sdaC=tnaB=tyrP=yhaO=yqeG=yhjV=mtr, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[C] COG2055 Malate/L-lactate dehydrogenases}: ylbC=ybiC=yiaK -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[R] COG2183 Predicted RNA binding protein, contains S1 domain}: yhgF -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[G] COG0738 Fucose permease#[P] COG0753 Catalase#[H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1#[F] COG1972 Nucleoside permease#[R] COG2249 Putative NADPH-quinone reductase, YabF family (modulator of drug activity B)}: fucP#katE#ygdL#yeiJ=yeiM=nupC#mdaB=yabF=ycaK=yheR, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[N] COG1388 LysM-repeat proteins and domains}: dniR_2, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[I] COG1607 Acyl-CoA hydrolase}: yciA -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Bacillus subtilis |B |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: BS_yqfO, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BS_yshB -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: cvpA -alkaliphile |Haemophilus influenzae |H |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: HI0105, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HI1206 -alkaliphile |Treponema pallidum |L |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: TP0977, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: TP0522 -alkaliphile |Borrelia burgdorferi |O |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: BB0468, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BB0766 -alkaliphile |Helicobacter pylori |U |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: HP0959, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HP0181 -alkaliphile |Rickettsia prowazekii |X |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: RP033 -alkaliphile |Escherichia coli |E |oneneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[I] COG1788 Acyl-CoA:acetate CoA transferase alpha subunit}: atoD=ydiF_1 -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[M] COG1792 Rod shape-determining protein MreC}: mreC -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[C] COG1866 Phosphoenolpyruvate carboxykinase#[HE] COG1932 Phosphoserine aminotransferase#[P] COG2116 Formate/nitrite family of transporters}: pckA#serC#focA=focB=yfdC=nirC -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0864 Uncharacterized ACR, YhhG family}: yhhG, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[M] COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases}: rfaJ=rfaI -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[I] COG2031 Short chain fatty acids transporter}: atoE -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[I] COG1267 Phosphatidylglycerophosphatase A}: pgpA -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG0417 DNA-dependent DNA polymerase elongation subunit (family B)#[K] COG0430 RNA phosphate cyclase}: polB#yhgK+J, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1199 Rad3-related DNA helicases}: dinG=ec1788110, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0367 Asparagine synthase (glutamine-hydrolyzing)}: asnB, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[F] COG0756 dUTPase}: dut -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG2142 Cytochrome b subunit of fumarate reductase and succinate dehydrogenase}: sdhD -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[N] COG1952 Preprotein translocase subunit SecB}: secB -alkaliphile |Escherichia coli |E |oneneeded |{[O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2}: yaaD=slyD, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[I] COG0688 Phosphatidylserine decarboxylase}: psd -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG1444 Uncharacterized ACR}: ypfI, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[M] COG1464 Lipoprotein, attached to the cytoplasmic membrane#[R] COG2011 Permease component of an uncharacterized ABC transporter}: yaeC=nlpA#yaeE, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[H] COG0684 Demethylmenaquinone methyltransferase}: menG, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[E] COG1760 L-serine deaminase#[T] COG1966 Carbon starvation protein CstA, predicted membrane protein#[I] COG2057 Coenzyme A transferases, subunit B#[O] COG2077 Thiol peroxidase}: sdaA=yhaP=sdaB=yhaQ#cstA=yjiY#atoA=ydiF_2#tpx -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[R] COG2194 Predicted membrane-associated, metal-dependent hydrolase}: ybiP=yhbX=yijP=yhjW=yjdB -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1330 Exonuclease V gamma subunit, RecC}: recC, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[P] COG1275 Tellurite resistance protein and related permeases}: tehA, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1678 Uncharacterized ACR}: yqgE -alkaliphile |Escherichia coli |E |oneneeded |{[I] COG0688 Phosphatidylserine decarboxylase}: psd -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance)}: ec1789038, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[S] COG1944 Uncharacterized ACR}: ycaO -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[N] COG1292 Choline-glycine betaine transporter}: betT=yeaV=caiT, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[C] COG0567 Pyruvate and 2-oxoglutarate dehydrogenases, E1 component}: sucA -alkaliphile |Escherichia coli |E |oneneeded |{[I] COG0688 Phosphatidylserine decarboxylase}: psd -alkaliphile |Escherichia coli |E |oneneeded |{[R] COG0615 Predicted cytidylyltransferases}: ec1789432_2, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[H] COG1072 Panthothenate kinase#[E] COG1168 PLP-dependent aminotransferases, MalY/PatB family#[S] COG1660 Uncharacterized BCR, YhbJ/UPF0042 family#[S] COG1666 Uncharacterized BCR, YajQ family#[R] COG2132 Putative multicopper oxidases#[D] COG2177 Cell division protein FtsX#[K] COG2186 Transcriptional regulators, FadR family#[S] COG2258 Uncharacterized BCR, YiiM family#[S] COG2259 Predicted membrane protein}: coaA=yggC#malY#yhbJ#yajQ#yacK=sufI#ftsX#exuR=uxuR=yhcK=lldR=fadR=glcC=pdhR#yiiM# yqjF=yphA, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[G] COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes}: yneB=ec1788414 -alkaliphile |Escherichia coli |E |oneneeded |{[O] COG0826 Protease related to collagenase}: ydcP=yegQ=yhbU=yhbV, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[P] COG1965 Protein implicated in iron transport, frataxin homolog}: cyaY -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628 -alkaliphile |Escherichia coli |E |oneneeded |{[K] COG1475 Predicted transcriptional regulators}: ec1787628, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[S] COG1806 Uncharacterized BCR, YdiA family}: ydiA -alkaliphile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[R] COG1534 Predicted RNA-binding protein containing KH domain#[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein MobB}: yhbY#yihC -alkaliphile |Escherichia coli |E |oneneeded |{[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI, {[O] COG1495 Disulfide bond formation protein DsbB}: dsbB -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: BS_tkt#BS_yloR, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: sll0529=sll1070=slr0453#sll0807, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: tktA=tktB#yhfD=yjcU=yjhK, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: MG066#MG112, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: HI1023#HI0566, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: CT750#CT121, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: TP0560#TP0945, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: MJ0681#MJ0680 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: CPn0893#CPn0185, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: MP073#MP582, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: Rv1449c#Rv1408, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: HP1088#HP1386, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: TM1762=TM0954#TM1718, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[E] COG0421 Spermidine synthase}: AF2334 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[E] COG0421 Spermidine synthase}: BS_ywhF -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[E] COG0421 Spermidine synthase}: speE -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[E] COG0421 Spermidine synthase}: PH0211 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[E] COG0421 Spermidine synthase}: MJ0313 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[E] COG0421 Spermidine synthase}: Rv2601_2 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059, {[E] COG0421 Spermidine synthase}: HP0832 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[E] COG0421 Spermidine synthase}: TM0654 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1542 Uncharacterized ACR}: MJ1355 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[S] COG1542 Uncharacterized ACR}: TM1014 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM, {[S] COG1559 Uncharacterized BCR, YceG family}: BS_yrrL -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0600 Uncharacterized permeases}: tauC=ycbM, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0600 Uncharacterized permeases}: HI0355, {[S] COG1559 Uncharacterized BCR, YceG family}: HI0457 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0600 Uncharacterized permeases}: CT854_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[S] COG1559 Uncharacterized BCR, YceG family}: TP0491 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0600 Uncharacterized permeases}: CPn1012_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746, {[S] COG1559 Uncharacterized BCR, YceG family}: BB0709 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[S] COG1559 Uncharacterized BCR, YceG family}: Rv2553c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[S] COG1559 Uncharacterized BCR, YceG family}: HP0587 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[S] COG1559 Uncharacterized BCR, YceG family}: RP322 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[O] COG1397 ADP-ribosylglycohydrolase#[E] COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB}: AF1724#AF1957=AF1958 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[O] COG1397 ADP-ribosylglycohydrolase#[E] COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB}: ec1788416#yjiM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[O] COG1397 ADP-ribosylglycohydrolase#[E] COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB}: MJ1187#MJ0007 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG1624 Uncharacterized ACR}: AF1759 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: BS_ymfG=BS_ymfH=BS_ymxG=BS_ywhN, {[S] COG1624 Uncharacterized ACR}: BS_ybbP=BS_yojJ -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: sll0055=sll0915=slr1331=sll2008=sll2009, {[S] COG1624 Uncharacterized ACR}: sll0505 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: yhjJ=yddC -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[S] COG1624 Uncharacterized ACR}: MG105 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: HI1368 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[S] COG1624 Uncharacterized ACR}: CT012 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1624 Uncharacterized ACR}: PH1015 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[S] COG1624 Uncharacterized ACR}: TP0826 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1624 Uncharacterized ACR}: MJ1002 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[S] COG1624 Uncharacterized ACR}: CPn0101 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: BB0536, {[S] COG1624 Uncharacterized ACR}: BB0008 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[S] COG1624 Uncharacterized ACR}: MP589 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: Rv2782c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: HP0657=HP1012 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: TM1346 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: RP219 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: AF1608#AF1607#AF1606 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: BS_bioF=BS_kbl -Mycolic Acid |Synechocystis |C |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: slr0917 -Mycolic Acid |Escherichia coli |E |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: bioF=kbl, {[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: potA=potG=ec1787712#potB=potH=ec1787713#potC=potI=ec1787714 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: MG042#MG043#MG044 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HI1553, {[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: HI1347#HI1346#HI1345 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CT777 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: PH0292 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: TP0652#TP0653#TP0654 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: MJ1298 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CPn1043=CPn0923 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: BB0642#BB0641#BB0640 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: MP099#MP098#MP097 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: Rv0032_2=Rv1569 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HP0598 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: TM1376#TM1377#TM1378 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: RP841 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM, {[F] COG0756 dUTPase}: BS_yncF=BS_yosS -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0600 Uncharacterized permeases}: tauC=ycbM, {[F] COG0756 dUTPase}: dut -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0600 Uncharacterized permeases}: HI0355, {[F] COG0756 dUTPase}: HI0954 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0600 Uncharacterized permeases}: CT854_1, {[F] COG0756 dUTPase}: CT292 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[F] COG0756 dUTPase}: TP0885 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0600 Uncharacterized permeases}: CPn1012_1, {[F] COG0756 dUTPase}: CPn0059 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[F] COG0756 dUTPase}: Rv2697c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[F] COG0756 dUTPase}: HP0865 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[F] COG0756 dUTPase}: RP399 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG1586 Uncharacterized ACR}: AF1610 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[S] COG1586 Uncharacterized ACR}: BS_ytcF -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1586 Uncharacterized ACR}: PH1992 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1586 Uncharacterized ACR}: MJ0315 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[S] COG1586 Uncharacterized ACR}: TM0655 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG1624 Uncharacterized ACR}: AF1759 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: BS_gcaD, {[S] COG1624 Uncharacterized ACR}: BS_ybbP=BS_yojJ -Mycolic Acid |Synechocystis |C |oneneeded |{[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: sll0899, {[S] COG1624 Uncharacterized ACR}: sll0505 -Mycolic Acid |Escherichia coli |E |oneneeded |{[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: glmU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[S] COG1624 Uncharacterized ACR}: MG105 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: HI0642 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[S] COG1624 Uncharacterized ACR}: CT012 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1624 Uncharacterized ACR}: PH1015 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[S] COG1624 Uncharacterized ACR}: TP0826 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1624 Uncharacterized ACR}: MJ1002 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[S] COG1624 Uncharacterized ACR}: CPn0101 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[S] COG1624 Uncharacterized ACR}: BB0008 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[S] COG1624 Uncharacterized ACR}: MP589 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: Rv1018c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: HP0683 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: TM1629 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: RP454 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: AF1011_2 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: BS_ydcA=BS_yqgP_2 -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: slr1461 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: glpG -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312, {[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: HI0618 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: PH1497 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162, {[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: TP0982 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: MJ0610a -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: Rv0110=Rv1337 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: TM1087=TM0584 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[S] COG0390 Uncharacterized ACR (membrane protein)}: BS_yjkA -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815, {[S] COG0390 Uncharacterized ACR (membrane protein)}: slr1647 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[S] COG0390 Uncharacterized ACR (membrane protein)}: ybbM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG0390 Uncharacterized ACR (membrane protein)}: MJ0938 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733, {[S] COG0390 Uncharacterized ACR (membrane protein)}: Rv3000 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[S] COG0390 Uncharacterized ACR (membrane protein)}: TM0193 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM, {[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: BS_sms -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041, {[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: slr0448 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0600 Uncharacterized permeases}: tauC=ycbM, {[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: sms -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0600 Uncharacterized permeases}: HI0355, {[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: HI1597 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0600 Uncharacterized permeases}: CT854_1, {[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: CT298 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: TP1022 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0600 Uncharacterized permeases}: CPn1012_1, {[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: CPn0053 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: Rv3585 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: HP0223 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485, {[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: TM0199 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: RP546 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc, {[M] COG1792 Rod shape-determining protein MreC}: BS_mreC -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[M] COG1792 Rod shape-determining protein MreC}: mreC -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[M] COG1792 Rod shape-determining protein MreC}: HI0038 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[M] COG1792 Rod shape-determining protein MreC}: CT638=CT638.1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367, {[M] COG1792 Rod shape-determining protein MreC}: TP0498 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[M] COG1792 Rod shape-determining protein MreC}: CPn0739 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045, {[M] COG1792 Rod shape-determining protein MreC}: BB0716 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[M] COG1792 Rod shape-determining protein MreC}: HP1372 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[M] COG1792 Rod shape-determining protein MreC}: RP767 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0058 Glucan phosphorylase}: BS_glgP, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0058 Glucan phosphorylase}: sll1356=slr1367, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0058 Glucan phosphorylase}: glgP=malP, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0058 Glucan phosphorylase}: HI1361, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0058 Glucan phosphorylase}: CT248, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[G] COG0058 Glucan phosphorylase}: PH1512 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0058 Glucan phosphorylase}: MJ1631 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0058 Glucan phosphorylase}: CPn0307, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0058 Glucan phosphorylase}: Rv1328, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: BS_ytmQ, {[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: sll1300, {[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: yggH, {[R] COG0600 Uncharacterized permeases}: tauC=ycbM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: MG347, {[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: HI0340, {[R] COG0600 Uncharacterized permeases}: HI0355 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: CT829, {[R] COG0600 Uncharacterized permeases}: CT854_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: TP0464 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: CPn0986, {[R] COG0600 Uncharacterized permeases}: CPn1012_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: MP320, {[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: Rv0208c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: HP0747 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: TM0925, {[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: RP847_2 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558, {[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: AF0680#AF1180 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc, {[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: BS_yqiZ=BS_glnQ=BS_yckI=BS_hisP=BS_yxeO#BS_ywnE=BS_ywjE=BS_ywiE -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120, {[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: slr1735#slr0197_1 -Mycolic Acid |Escherichia coli |E |oneneeded |{[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: yecS=yhdZ=glnQ=gltL=hisP=artP=phnC#cls=ybhO=ymdC=pssA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: HI1078=HI1180#HI0425 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: CT130#CT158=CT157=CT084=CT155=CT154=CT284 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: CPn0191#CPn0329=CPn0435 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: HP1171#HP0323=HP0190 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182, {[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: TM0591#TM0652 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: RP868#RP819 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: BS_folC, {[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM -Mycolic Acid |Synechocystis |C |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: sll1612, {[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: folC, {[R] COG0600 Uncharacterized permeases}: tauC=ycbM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: HI1261, {[R] COG0600 Uncharacterized permeases}: HI0355 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0600 Uncharacterized permeases}: CT854_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: TP0340 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0600 Uncharacterized permeases}: CPn1012_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: Rv2447c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: HP1545 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: TM0166, {[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: RP536 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128, {[R] COG1768 Predicted phosphohydrolases}: CT488 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG1768 Predicted phosphohydrolases}: MJ1445 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244, {[R] COG1768 Predicted phosphohydrolases}: CPn0606 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041, {[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: sll0896 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0600 Uncharacterized permeases}: tauC=ycbM, {[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: ruvC -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0600 Uncharacterized permeases}: HI0355, {[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: HI0314 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0600 Uncharacterized permeases}: CT854_1, {[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: CT502 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: TP0517 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0600 Uncharacterized permeases}: CPn1012_1, {[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: CPn0621 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: Rv2594c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: HP0877 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485, {[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: TM0575 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: RP119 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424, {[R] COG1373 Uncharacterized ATPases of the AAA superfamily}: HI1038 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG1373 Uncharacterized ATPases of the AAA superfamily}: PH0691=PH0837=PH0922=PH0567 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG1373 Uncharacterized ATPases of the AAA superfamily}: MJ1544=MJ1637 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c, {[R] COG1373 Uncharacterized ATPases of the AAA superfamily}: Rv0597c=Rv3179=Rv2008c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[R] COG1373 Uncharacterized ATPases of the AAA superfamily}: TM0616=TM1265 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: BS_ypdQ#BS_recN, {[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: slr0080=sll0980_1#sll1520, {[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: rnhA#recN, {[R] COG0600 Uncharacterized permeases}: tauC=ycbM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: HI0138#HI0070, {[R] COG0600 Uncharacterized permeases}: HI0355 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0600 Uncharacterized permeases}: CT854_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: TP0353#TP0442 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0600 Uncharacterized permeases}: CPn1012_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: Rv2228c_1#Rv1696 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: HP0661#HP1393 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: RP726#RP182 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: AF0186=AF0564 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BS_pgi, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: BS_nifS=BS_nifZ=BS_ycbU=BS_yrvO -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: slr1349, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: slr0387=sll0704=slr2143 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: yfhO -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MG111 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HI1576, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: HI0378=HI1343 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CT378, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: CT258=CT721 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: PH0626 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TP0475, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: TP0863 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MJ1605 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CPn1025, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: CPn0396=CPn0862 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BB0730 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MP583 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: Rv0946c, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: Rv3025c=Rv3700c=Rv3778c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HP1166, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: HP0220 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TM1385, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: TM1692 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: RP487=RP486 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG1624 Uncharacterized ACR}: AF1759 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: BS_atpD#BS_atpA#BS_atpG#BS_atpC#BS_atpB#BS_atpF, {[S] COG1624 Uncharacterized ACR}: BS_ybbP=BS_yojJ -Mycolic Acid |Synechocystis |C |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: slr1329#sll1326#sll1327#slr1330#sll1322#sll1323=sll1324, {[S] COG1624 Uncharacterized ACR}: sll0505 -Mycolic Acid |Escherichia coli |E |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: atpD#atpA#atpG#atpC#atpB#atpF -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: MG399#MG401#MG400#MG398#MG405#MG403, {[S] COG1624 Uncharacterized ACR}: MG105 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: HI0479#HI0481#HI0480#HI0478#HI0485#HI0483 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[S] COG1624 Uncharacterized ACR}: CT012 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1624 Uncharacterized ACR}: PH1015 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[S] COG1624 Uncharacterized ACR}: TP0826 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1624 Uncharacterized ACR}: MJ1002 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[S] COG1624 Uncharacterized ACR}: CPn0101 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[S] COG1624 Uncharacterized ACR}: BB0008 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: MP244#MP242#MP243#MP245#MP238#MP240, {[S] COG1624 Uncharacterized ACR}: MP589 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: Rv1310#Rv1308#Rv1309#Rv1311#Rv1304#Rv1307_1=Rv1306 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: HP1132#HP1134#HP1133#HP1131#HP0828#HP1137 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: TM1610#TM1612#TM1611#TM1609#TM1616#TM1614 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: RP801#RP803#RP802#RP800#RP023#RP021 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: HIN1334#HI0703=HI0489 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: MJ1591#MJ0374_1=MJ0201 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0434 Predicted TIM-barrel enzyme}: AF0419 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[R] COG0434 Predicted TIM-barrel enzyme}: sll0634 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG0434 Predicted TIM-barrel enzyme}: yjhM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0434 Predicted TIM-barrel enzyme}: PH1209 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0434 Predicted TIM-barrel enzyme}: MJ1115 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG0600 Uncharacterized permeases}: tauC=ycbM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359, {[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312, {[R] COG0600 Uncharacterized permeases}: HI0355 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040, {[R] COG0600 Uncharacterized permeases}: CT854_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0, {[R] COG0600 Uncharacterized permeases}: CPn1012_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022, {[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306, {[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[F] COG0213 Thymidine phosphorylase}: AF1341=AF1342 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[F] COG0213 Thymidine phosphorylase}: BS_pdp -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: slr0488#slr0819 -Mycolic Acid |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: mviN#lnt -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MG051 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: HI0964#HI0302 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: CT624#CT534 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[F] COG0213 Thymidine phosphorylase}: PH1598 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: TP0516#TP0252=TP0417 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MJ0667 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: CPn0730#CPn0653 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: BB0810#BB0237 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MP090 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[F] COG0213 Thymidine phosphorylase}: Rv3314c, {[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: Rv3910_1#Rv2051c_1=Rv2261c=Rv2262c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: HP0885#HP0180 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[F] COG0213 Thymidine phosphorylase}: TM1653, {[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: TM0086#TM0573 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: RP590#RP366 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[H] COG1488 Nicotinic acid phosphoribosyltransferase}: AF0821 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: BS_bioF=BS_kbl, {[H] COG1488 Nicotinic acid phosphoribosyltransferase}: BS_yueK -Mycolic Acid |Synechocystis |C |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: slr0917, {[H] COG1488 Nicotinic acid phosphoribosyltransferase}: slr0788 -Mycolic Acid |Escherichia coli |E |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: bioF=kbl, {[H] COG1488 Nicotinic acid phosphoribosyltransferase}: pncB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[H] COG1488 Nicotinic acid phosphoribosyltransferase}: MG037 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HI1553 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CT777 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: PH0292, {[H] COG1488 Nicotinic acid phosphoribosyltransferase}: PH1868 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[H] COG1488 Nicotinic acid phosphoribosyltransferase}: TP0628 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: MJ1298 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CPn1043=CPn0923 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[H] COG1488 Nicotinic acid phosphoribosyltransferase}: BB0635 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[H] COG1488 Nicotinic acid phosphoribosyltransferase}: MP107 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: Rv0032_2=Rv1569, {[H] COG1488 Nicotinic acid phosphoribosyltransferase}: Rv0573c=Rv1330c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HP0598 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[H] COG1488 Nicotinic acid phosphoribosyltransferase}: TM0474 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: RP841 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1517 Uncharacterized ACR#[S] COG1851 Uncharacterized ACR}: PH0168#PH1314 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1517 Uncharacterized ACR#[S] COG1851 Uncharacterized ACR}: MJ1666#MJ1463 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: AF0051=AF0522=AF0904 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BS_pgi, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: BS_argE=BS_rocB=BS_ylmB=BS_yqjN=BS_ytjP=BS_yurH -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: slr1349 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: dapE=ygeY=argE=ylbB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MG111 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HI1576, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: HI0102=HI0588 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CT378 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: PH0265=PH1153=PH1288=PH1715 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TP0475 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MJ1605, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: MJ0457=MJ1497 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CPn1025, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: CPn0980 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BB0730 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MP583 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: Rv0946c, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: Rv1202=Rv2141c=Rv2522c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HP1166, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: HP0212 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TM1385, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: TM0129=TM1666 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: RP874 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: AF1415_1#AF2342=AF1075=AF1080=AF1093 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[K] COG0782 Transcription elongation factor}: BS_greA -Mycolic Acid |Synechocystis |C |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: sll0855=slr0617=sll1864_1#slr0664 -Mycolic Acid |Escherichia coli |E |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: yadQ=ec1787876#relE, {[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[K] COG0782 Transcription elongation factor}: MG282 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[K] COG0782 Transcription elongation factor}: HI1331=HI0569 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[K] COG0782 Transcription elongation factor}: CT636_2 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: PH0032#PHs013=PHs016 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[K] COG0782 Transcription elongation factor}: TP0019 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: MJ0305#MJ0071=MJ0909=MJ1103 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[K] COG0782 Transcription elongation factor}: CPn0741_2 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[K] COG0782 Transcription elongation factor}: BB0132_2 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[K] COG0782 Transcription elongation factor}: MP438 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: Rv0143c#Rv1246c=Rv2866, {[K] COG0782 Transcription elongation factor}: Rv1080c=Rv3788 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[K] COG0782 Transcription elongation factor}: HP0866 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[K] COG0782 Transcription elongation factor}: TM1706 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[K] COG0782 Transcription elongation factor}: RP861 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc, {[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: BS_aroA_2#BS_glyS#BS_glyQ#BS_ycsD=BS_ywpB -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120, {[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: sll0934#slr0220#slr0638#sll1605 -Mycolic Acid |Escherichia coli |E |oneneeded |{[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: kdsA=aroG=aroH=aroF#glyS#glyQ#fabA=fabZ -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: HI1557=HI1547#HI0924#HI0927#HI1062=HI1325 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: CT382=CT655#CT796_2#CT796_1#CT532 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: CPn0484=CPn0721#CPn0946_2#CPn0946_1#CPn0651 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: HP0003#HP0972#HP0960#HP1376 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182, {[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: TM0343#TM0217#TM0216#TM0801 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: RP062#RP849#RP850#RP008 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: AF1822=AF1953 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: BS_yjbP -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: sll1387 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: apaH=pphA=ygbH -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312, {[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: HI0551=HI0762 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: PH1616=PH1004 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: MJ0912 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: TM1876=TM0742 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: AF0231=AF1766_1#AF0972 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0469 Pyruvate kinase}: BS_pykA_1, {[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: BS_glnH=BS_yxeM=BS_yckK=BS_yckB=BS_ytmK=BS_yqiX=BS_ytmJ#BS_dinG_1 -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0469 Pyruvate kinase}: sll0587=sll1275_1, {[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: sll1104=slr1257_1=slr1257_3=sll0224=sll1762=sll0064=slr0341#slr1959_1 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0469 Pyruvate kinase}: pykF=pykA=ec1788578=yhaF, {[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: artI=yhdW=artJ=hisJ=argT=fliY=glnH#ec1788149=dnaQ=rnt -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0469 Pyruvate kinase}: MG216 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0469 Pyruvate kinase}: HI1573, {[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: HI1179=HI1080=HI0232_1#HI0137=HI0324 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0469 Pyruvate kinase}: CT332, {[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: CT381=CT486#CT261=CT536 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[G] COG0469 Pyruvate kinase}: PH0570 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: TP0309=TP0308#TP0643 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0469 Pyruvate kinase}: MJ0108 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0469 Pyruvate kinase}: CPn0097, {[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: CPn0482=CPn0604#CPn0655=CPn0410 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0469 Pyruvate kinase}: BB0348 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0469 Pyruvate kinase}: MP534 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0469 Pyruvate kinase}: Rv1617, {[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: Rv0411c#Rv2191_1=Rv3711c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: HP1172=HP0940#HP1387 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0469 Pyruvate kinase}: TM0208, {[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: TM0593=TM1170_1=TM1109_2#TM0496 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: RP150#RP732 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: AF0922#AF2217_1#AF2217_2 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BS_pgi, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: BS_ypcA=BS_yqiT=BS_yweB#BS_yngE_1=BS_yqjD_1=BS_yttI#BS_accA=BS_yngE_2=BS_yqjD_2 -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: slr1349, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: slr0710#sll0336#sll0728 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: gdhA#accD#accA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MG111 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HI1576, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: HI0189#HI1260#HI0406 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CT378, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: CT773#CT293#CT265 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: PH1593#PH1287_1#PH1287_2 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TP0475 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MJ1605 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CPn1025, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: CPn0919#CPn0058#CPn0414 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BB0730 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MP583 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: Rv0946c, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: Rv2476c_2#Rv0904c_1=Rv2247_1=Rv3280_1=Rv3799c_1=Rv0974c_1=Rv2502c_1#Rv0904c_2=Rv 0974c_2=Rv2247_2=Rv2502c_2=Rv3280_2=Rv3799c_2 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HP1166, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: HP0380#HP0950#HP0557 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TM1385, {[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: TM1015#TM0716_1#TM0716_2 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: RP758_2#RP619_1#RP619_2 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG1573 Uracil-DNA glycosylase}: AF2277 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BS_pgi -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: slr1349, {[L] COG1573 Uracil-DNA glycosylase}: sll1217 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MG111 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HI1576 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CT378 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[L] COG1573 Uracil-DNA glycosylase}: PH1472 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TP0475, {[L] COG1573 Uracil-DNA glycosylase}: TP0229 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MJ1605 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CPn1025 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BB0730 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MP583 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: Rv0946c, {[L] COG1573 Uracil-DNA glycosylase}: Rv1259 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HP1166, {[L] COG1573 Uracil-DNA glycosylase}: HP0650 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TM1385, {[L] COG1573 Uracil-DNA glycosylase}: TM0511 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG1573 Uracil-DNA glycosylase}: RP845 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG1033 Membrane proteins related to SecD/SecF}: AF0459=AF1229 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG1033 Membrane proteins related to SecD/SecF}: PH0287 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162, {[R] COG1033 Membrane proteins related to SecD/SecF}: TP0790 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG1033 Membrane proteins related to SecD/SecF}: MJ1562 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022, {[R] COG1033 Membrane proteins related to SecD/SecF}: BB0252 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[R] COG1033 Membrane proteins related to SecD/SecF}: TM1294=TM0817 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: BS_citG#BS_hemH#BS_yjbW#BS_yfkH, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc -Mycolic Acid |Synechocystis |C |oneneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: slr0018#slr0839_1#slr1051#slr0119, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: fumC#hemH#fabI#yihY=yhjD -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: HI1398#HI1160#HI1734#HI0276 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: CT855#CT485#CT104#CT132 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: CPn1013#CPn0603#CPn0406#CPn0188 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: Rv1098c#Rv1485#Rv1484#Rv2707=Rv3335c, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: HP1325#HP0376#HP0195#HP1407 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: RP665#RP884#RP365#RP496 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc, {[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: BS_yetJ -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120, {[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: sll1150 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: ybhL=yccA=ybhM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: HI0044 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: CT819 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: CPn0971 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045, {[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: BB0539 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: HP0920 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: RP147 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[S] COG1431 Uncharacterized ACR}: AF1318 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1431 Uncharacterized ACR}: MJ1321 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BS_pgi, {[R] COG0218 Predicted GTPases}: BS_ysxC -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: slr1349 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[R] COG0218 Predicted GTPases}: yihA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MG111, {[R] COG0218 Predicted GTPases}: MG335 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HI1576, {[R] COG0218 Predicted GTPases}: HI1118 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CT378 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TP0475 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MJ1605, {[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CPn1025 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BB0730 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MP583, {[R] COG0218 Predicted GTPases}: MP359 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: Rv0946c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HP1166, {[R] COG0218 Predicted GTPases}: HP1567 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TM1385, {[R] COG0218 Predicted GTPases}: TM1466 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA, {[R] COG2262 GTPases, the HflX family}: BS_ynbA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673, {[R] COG2262 GTPases, the HflX family}: slr1521 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU, {[R] COG2262 GTPases, the HflX family}: hflX -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403, {[R] COG2262 GTPases, the HflX family}: CT379 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG2262 GTPases, the HflX family}: PH1132 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG2262 GTPases, the HflX family}: MJ1126 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530, {[R] COG2262 GTPases, the HflX family}: CPn0478 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c, {[R] COG2262 GTPases, the HflX family}: Rv2725c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[R] COG2262 GTPases, the HflX family}: TM0527 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558, {[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: AF1354 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc, {[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: BS_yvgV=BS_yjbH=BS_ywbO -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120, {[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: slr0313 -Mycolic Acid |Escherichia coli |E |oneneeded |{[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: dsbG=dsbC -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: HI1213 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: CT177 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: CPn0228 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c, {[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: Rv2969c=Rv1743_2 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: HP0231 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: RP025=RP431 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG2095 Integral membrane proteins of the MarC family}: AF2111 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[S] COG2095 Integral membrane proteins of the MarC family}: BS_yvbG -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[S] COG2095 Integral membrane proteins of the MarC family}: ychE=yhgN=ydeB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040, {[S] COG2095 Integral membrane proteins of the MarC family}: CT852=CT853 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG2095 Integral membrane proteins of the MarC family}: PH0760=PH0214 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162, {[S] COG2095 Integral membrane proteins of the MarC family}: TP0988 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG2095 Integral membrane proteins of the MarC family}: MJ1677=MJ0972 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0, {[S] COG2095 Integral membrane proteins of the MarC family}: CPn1010=CPn1011 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326, {[S] COG1694 Uncharacterized ACR, MazG family}: AF0820=AF0660=AF1178 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0218 Predicted GTPases}: BS_ysxC, {[S] COG1694 Uncharacterized ACR, MazG family}: BS_yabN=BS_ypjD=BS_yvdC -Mycolic Acid |Synechocystis |C |oneneeded |{[S] COG1694 Uncharacterized ACR, MazG family}: sll1005 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[S] COG1694 Uncharacterized ACR, MazG family}: mazG -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0218 Predicted GTPases}: MG335 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0218 Predicted GTPases}: HI1118, {[S] COG1694 Uncharacterized ACR, MazG family}: HI0460 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[S] COG1694 Uncharacterized ACR, MazG family}: CT255 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200, {[S] COG1694 Uncharacterized ACR, MazG family}: PHs001=PHs025 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[S] COG1694 Uncharacterized ACR, MazG family}: TP0778 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[S] COG1694 Uncharacterized ACR, MazG family}: CPn0401 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[S] COG1694 Uncharacterized ACR, MazG family}: BB0760 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0218 Predicted GTPases}: MP359 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[S] COG1694 Uncharacterized ACR, MazG family}: Rv1021 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0218 Predicted GTPases}: HP1567 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0218 Predicted GTPases}: TM1466, {[S] COG1694 Uncharacterized ACR, MazG family}: TM0913=TM0360 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: htrB=ddg=msbB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: HI0199=HI1527 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: CT010 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: CPn0098 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c, {[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: Rv2611c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: HP0280 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: RP718 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA, {[R] COG1092 Predicted SAM-dependent methyltransferases}: BS_ywbD -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU, {[R] COG1092 Predicted SAM-dependent methyltransferases}: ec1787201=ycbY_2 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424, {[R] COG1092 Predicted SAM-dependent methyltransferases}: HIN1253+2_2 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403, {[R] COG1092 Predicted SAM-dependent methyltransferases}: CT404 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG1092 Predicted SAM-dependent methyltransferases}: PH1915 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG1092 Predicted SAM-dependent methyltransferases}: MJ1653=MJ1649 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530, {[R] COG1092 Predicted SAM-dependent methyltransferases}: CPn0531 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[R] COG1092 Predicted SAM-dependent methyltransferases}: TM1697 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[C] COG0822 NifU homologs involved in Fe-S cluster formation}: AF0185=AF0565 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0469 Pyruvate kinase}: BS_pykA_1, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: BS_yurV -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0469 Pyruvate kinase}: sll0587=sll1275_1 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0469 Pyruvate kinase}: pykF=pykA=ec1788578=yhaF, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: ec1788878 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0469 Pyruvate kinase}: MG216, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: MG337 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0469 Pyruvate kinase}: HI1573, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: HI0377 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0469 Pyruvate kinase}: CT332, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: CT720_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[G] COG0469 Pyruvate kinase}: PH0570 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[C] COG0822 NifU homologs involved in Fe-S cluster formation}: TP0615 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0469 Pyruvate kinase}: MJ0108 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0469 Pyruvate kinase}: CPn0097, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: CPn0861_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0469 Pyruvate kinase}: BB0348 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0469 Pyruvate kinase}: MP534, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: MP353 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0469 Pyruvate kinase}: Rv1617, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: Rv1465 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[C] COG0822 NifU homologs involved in Fe-S cluster formation}: HP0221_1 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0469 Pyruvate kinase}: TM0208, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: TM1372 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[C] COG0822 NifU homologs involved in Fe-S cluster formation}: RP485 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: AF2178 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: BS_ypsC, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: slr0064, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: ycbY_1, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: HIN1253+2_1, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: PH0644 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: MJ0438 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0205 6-phosphofructokinase}: BS_pfk, {[R] COG0218 Predicted GTPases}: BS_ysxC -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0205 6-phosphofructokinase}: sll1196=sll0745 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0205 6-phosphofructokinase}: pfkA, {[R] COG0218 Predicted GTPases}: yihA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0205 6-phosphofructokinase}: MG215, {[R] COG0218 Predicted GTPases}: MG335 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0205 6-phosphofructokinase}: HI0982, {[R] COG0218 Predicted GTPases}: HI1118 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0205 6-phosphofructokinase}: CT205=CT207 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0205 6-phosphofructokinase}: TP0542=TP0108 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0205 6-phosphofructokinase}: CPn0160=CPn0208 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0205 6-phosphofructokinase}: BB0020=BB0727 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0205 6-phosphofructokinase}: MP535, {[R] COG0218 Predicted GTPases}: MP359 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0205 6-phosphofructokinase}: Rv3010c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0218 Predicted GTPases}: HP1567 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0205 6-phosphofructokinase}: TM0289=TM0209, {[R] COG0218 Predicted GTPases}: TM1466 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[F] COG0213 Thymidine phosphorylase}: AF1341=AF1342 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[F] COG0213 Thymidine phosphorylase}: BS_pdp, {[M] COG0793 Periplasmic protease}: BS_ctpA=BS_yvjB -Mycolic Acid |Synechocystis |C |oneneeded |{[M] COG0793 Periplasmic protease}: slr1751=slr0008=slr0257 -Mycolic Acid |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[M] COG0793 Periplasmic protease}: prc -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MG051 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[M] COG0793 Periplasmic protease}: HI1668 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[M] COG0793 Periplasmic protease}: CT441 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[F] COG0213 Thymidine phosphorylase}: PH1598 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[M] COG0793 Periplasmic protease}: TP0277 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MJ0667 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[M] COG0793 Periplasmic protease}: CPn0555 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[M] COG0793 Periplasmic protease}: BB0359 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MP090 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[F] COG0213 Thymidine phosphorylase}: Rv3314c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[M] COG0793 Periplasmic protease}: HP1350 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[F] COG0213 Thymidine phosphorylase}: TM1653, {[M] COG0793 Periplasmic protease}: TM0747 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[M] COG0793 Periplasmic protease}: RP228 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) PurT#[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes}: BS_purT#BS_cysH=BS_yitB, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) PurT#[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes}: slr0861#slr1791, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) PurT#[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes}: purT#cysH=cysD, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) PurT#[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes}: PH0318#PH0268_2=PH1441_2 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) PurT#[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes}: MJ1486#MJ0066_2=MJ0973_2 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[F] COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) PurT#[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes}: Rv0389#Rv1285=Rv2392, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA, {[K] COG1510 Predicted transcriptional regulators#[M] COG2247 Putative cell wall-binding domain}: BS_yuaC=BS_yvbF=BS_yvaV#BS_lytB_1=BS_lytC_1 -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[K] COG1510 Predicted transcriptional regulators#[M] COG2247 Putative cell wall-binding domain}: PH0289=PH0825#PH0614=PH1673=PH1674 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[K] COG1510 Predicted transcriptional regulators#[M] COG2247 Putative cell wall-binding domain}: MJ1563#MJ0755 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[L] COG1002 Type II restriction enzyme, methylase subunits}: BS_yeeA -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[L] COG1002 Type II restriction enzyme, methylase subunits}: MJECS02 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417, {[L] COG1002 Type II restriction enzyme, methylase subunits}: BBH09=BBE02 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618, {[L] COG1002 Type II restriction enzyme, methylase subunits}: HP1517 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: BS_bioF=BS_kbl, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: slr0917, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: bioF=kbl, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HI1553, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CT777, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: PH0292 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: MJ1298 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CPn1043=CPn0923, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: Rv0032_2=Rv1569, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HP0598, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: RP841, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{M_nocog}: M_specific -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: BS_addA#BS_yvaL#BS_spoIIIE=BS_ytpT=BS_ydcQ=BS_yukA -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0600 Uncharacterized permeases}: tauC=ycbM, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0600 Uncharacterized permeases}: HI0355, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: HI1321#HI0445#HI1592 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0600 Uncharacterized permeases}: CT854_1, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: CT639#CT_secG#CT739 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: TP0898#TP0536#TP0999_2 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0600 Uncharacterized permeases}: CPn1012_1, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: CPn0738#CPn1066#CPn0880 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: BB0633#BB0054#BB0257 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: Rv0630c#Rv1440#Rv2748c=Rv1784=Rv0284=Rv3870=Rv3871=Rv3447c=Rv3894c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: HP1553#HP1255#HP1090=HP0066 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: RP734#RP079#RP823 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[C] COG1031 Uncharacterized Fe-S oxidoreductases#[L] COG1110 Reverse gyrase#[J] COG1184 Translation initiation factor eIF-2B delta subunit#[K] COG1318 Predicted transcriptional regulators#[S] COG1361 Predicted membrane protein#[S] COG1895 Uncharacterized ACR#[S] COG2250 Uncharacterized ACR}: AF0243#AF1024#AF2037#AF0796#AF1818=AF1138_2#AF0298#AF0593=AF2305 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[C] COG1031 Uncharacterized Fe-S oxidoreductases#[L] COG1110 Reverse gyrase#[J] COG1184 Translation initiation factor eIF-2B delta subunit#[K] COG1318 Predicted transcriptional regulators#[S] COG1361 Predicted membrane protein#[S] COG1895 Uncharacterized ACR#[S] COG2250 Uncharacterized ACR}: PH0094#PH0800_1=PH0800_3#PH0440=PH0208#PH0283#PH1368_2=PH0286#PH1297#PH0402=PH06 90 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[C] COG1031 Uncharacterized Fe-S oxidoreductases#[L] COG1110 Reverse gyrase#[J] COG1184 Translation initiation factor eIF-2B delta subunit#[K] COG1318 Predicted transcriptional regulators#[S] COG1361 Predicted membrane protein#[S] COG1895 Uncharacterized ACR#[S] COG2250 Uncharacterized ACR}: MJ0274#MJ1512_1=MJ1512_3#MJ0122#MJ1053#MJ1561=MJ1506=MJ0795#MJ0605=MJ0142#MJ1304 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[C] COG1031 Uncharacterized Fe-S oxidoreductases#[L] COG1110 Reverse gyrase#[J] COG1184 Translation initiation factor eIF-2B delta subunit#[K] COG1318 Predicted transcriptional regulators#[S] COG1361 Predicted membrane protein#[S] COG1895 Uncharacterized ACR#[S] COG2250 Uncharacterized ACR}: TM1601#TM0173#TM1440#TM0369#TM0838#TM1000#TM0613 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: BS_thrB#BS_yhdU=BS_yhdV, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: sll1760#sll1192, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: thrB#ybeI, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: HI0088#HI0597.1, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: PH1087#PH1502 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: MJ1104#MJ1523 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: Rv1296#Rv3069=Rv3070, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: HP1050#HP1225, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: TM0545#TM0020, {[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0218 Predicted GTPases}: BS_ysxC -Mycolic Acid |Synechocystis |C |oneneeded |{[S] COG1351 Uncharacterized ACR, THY1 family}: sll1635 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0218 Predicted GTPases}: MG335 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0218 Predicted GTPases}: HI1118 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[S] COG1351 Uncharacterized ACR, THY1 family}: CT632 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200, {[S] COG1351 Uncharacterized ACR, THY1 family}: PH0762 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[S] COG1351 Uncharacterized ACR, THY1 family}: TP1007 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[S] COG1351 Uncharacterized ACR, THY1 family}: CPn0746 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[S] COG1351 Uncharacterized ACR, THY1 family}: BBA76 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0218 Predicted GTPases}: MP359 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[S] COG1351 Uncharacterized ACR, THY1 family}: Rv2754c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0218 Predicted GTPases}: HP1567, {[S] COG1351 Uncharacterized ACR, THY1 family}: HP1533 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0218 Predicted GTPases}: TM1466, {[S] COG1351 Uncharacterized ACR, THY1 family}: TM0449 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102, {[S] COG1351 Uncharacterized ACR, THY1 family}: RP301 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: BS_bioA=BS_yhxA, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: HI1554, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: MJ1300 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: CPn1041, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: Rv1568=Rv3329, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: HP0976, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: BS_yodO -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: yjeK -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: HI0329 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595, {[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: TP0121 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: MJ0634 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: TM0121 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: AF1415_1#AF2342=AF1075=AF1080=AF1093 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: BS_lonA -Mycolic Acid |Synechocystis |C |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: sll0855=slr0617=sll1864_1#slr0664 -Mycolic Acid |Escherichia coli |E |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: yadQ=ec1787876#relE, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: MG239 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: HI0462 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: CT344 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: PH0032#PHs013=PHs016 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: TP0524 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: MJ0305#MJ0071=MJ0909=MJ1103 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: CPn0027 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: BB0253=BB0613 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: MP505 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: Rv0143c#Rv1246c=Rv2866 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: HP1379 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: TM1633 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: RP450 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[M] COG1004 Predicted UDP-glucose 6-dehydrogenase}: AF0302=AF0596 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[M] COG1004 Predicted UDP-glucose 6-dehydrogenase}: BS_tuaD=BS_ytcA=BS_ywqF -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815, {[M] COG1004 Predicted UDP-glucose 6-dehydrogenase}: slr1299 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[M] COG1004 Predicted UDP-glucose 6-dehydrogenase}: ugd -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[M] COG1004 Predicted UDP-glucose 6-dehydrogenase}: MJ1054_1=MJ1054_3 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733, {[M] COG1004 Predicted UDP-glucose 6-dehydrogenase}: Rv0322 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[M] COG1004 Predicted UDP-glucose 6-dehydrogenase}: TM0583 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638, {[M] COG1004 Predicted UDP-glucose 6-dehydrogenase}: RP779 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[C] COG1254 Acylphosphatases}: AF0818 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[C] COG1254 Acylphosphatases}: BS_yflL -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[C] COG1254 Acylphosphatases}: ec1787203 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[C] COG1254 Acylphosphatases}: MJ0809=MJ0553=MJ1405=MJ1331 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417, {[C] COG1254 Acylphosphatases}: BBB01 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[C] COG1254 Acylphosphatases}: TM1564 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[P] COG2059 Chromate transport protein ChrA}: BS_ywrA=BS_ywrB -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815, {[P] COG2059 Chromate transport protein ChrA}: slr1457 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG2059 Chromate transport protein ChrA}: MJ0718 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417, {[P] COG2059 Chromate transport protein ChrA}: BB0451=BB0452 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[P] COG2059 Chromate transport protein ChrA}: TM1819=TM1818 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[C] COG0348 Polyferredoxin}: AF0143 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815, {[C] COG0348 Polyferredoxin}: slr1529_3 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[C] COG0348 Polyferredoxin}: yccM=yejZ -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[C] COG0348 Polyferredoxin}: HI0346 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[C] COG0348 Polyferredoxin}: MJ0749=MJ0750 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618, {[C] COG0348 Polyferredoxin}: HP1508 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[C] COG0348 Polyferredoxin}: TM0049_2 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: BS_yrrC -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: HI1322 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: CT652=CT033 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: MJ1519 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: CPn0752=CPn0123 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: BB0632 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: Rv0629c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0218 Predicted GTPases}: BS_ysxC, {[R] COG1837 Predicted RNA-binding protein (KH domain)}: BS_ylqC -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG1837 Predicted RNA-binding protein (KH domain)}: slr0287 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0218 Predicted GTPases}: MG335 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0218 Predicted GTPases}: HI1118 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG1837 Predicted RNA-binding protein (KH domain)}: CT763=CT659 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG1837 Predicted RNA-binding protein (KH domain)}: TP0906 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG1837 Predicted RNA-binding protein (KH domain)}: CPn0720=CPn0906 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG1837 Predicted RNA-binding protein (KH domain)}: BB0696 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0218 Predicted GTPases}: MP359 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG1837 Predicted RNA-binding protein (KH domain)}: Rv2908c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0218 Predicted GTPases}: HP1567, {[R] COG1837 Predicted RNA-binding protein (KH domain)}: HP1150 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0218 Predicted GTPases}: TM1466, {[R] COG1837 Predicted RNA-binding protein (KH domain)}: TM1567 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0144 Predicted rRNA methylase}: AF0853=AF2039=AF2324 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0144 Predicted rRNA methylase}: BS_yloM, {[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: BS_ackA=BS_yqiU#BS_gidB#BS_bex -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0144 Predicted rRNA methylase}: slr0679, {[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: sll1299#slr0072#slr0321 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun, {[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: ackA=yhaA#gidB#era -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: MG357#MG380#MG387 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0144 Predicted rRNA methylase}: HI0624, {[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: HI1204#HI0486#HI0013 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0144 Predicted rRNA methylase}: CT553 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0144 Predicted rRNA methylase}: PH0851=PH1078=PH1374=PH1537=PH1991 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: TP0476#TP0946#TP0541 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[J] COG0144 Predicted rRNA methylase}: MJ0026 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0144 Predicted rRNA methylase}: CPn0674 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: BB0622#BB0177#BB0660 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: MP309#MP284#MP274 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0144 Predicted rRNA methylase}: Rv1407, {[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: Rv0409#Rv3919c#Rv2364c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: HP0903#HP1063#HP0517 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0144 Predicted rRNA methylase}: TM1512, {[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: TM0274=TM1756=TM1754#TM0707#TM0847=TM0445 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: RP110#RP057#RP118 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0218 Predicted GTPases}: BS_ysxC, {[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: BS_nagB=BS_ybfT#BS_yqjJ#BS_yrrU -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: sll1479#slr1843#slr1977 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: nagB=yieK=yraG#zwf#pfs=amn -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0218 Predicted GTPases}: MG335 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0218 Predicted GTPases}: HI1118, {[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: HI0556=HI0141#HI0558#HI1216 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: CT186#CT185#CT751 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: TP0477#TP0478#TP0170 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: CPn0239#CPn0238#CPn0232=CPn0894 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: BB0152=BB0222#BB0636#BBE07=BBI06=BB0375=BB0588 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0218 Predicted GTPases}: MP359 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: Rv1445c#Rv1121=Rv1447c#Rv0091=Rv2293c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0218 Predicted GTPases}: HP1567, {[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: HP1102#HP1101#HP0089 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0218 Predicted GTPases}: TM1466, {[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: TM1154#TM1155#TM1129 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[S] COG1808 Uncharacterized ACR}: AF0785 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815, {[S] COG1808 Uncharacterized ACR}: sll1151 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1808 Uncharacterized ACR}: MJ0678=MJ1221 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0144 Predicted rRNA methylase}: AF0853=AF2039=AF2324 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0144 Predicted rRNA methylase}: BS_yloM, {[J] COG0828 Ribosomal protein S21}: BS_rpsU -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0144 Predicted rRNA methylase}: slr0679, {[J] COG0828 Ribosomal protein S21}: ssl0601 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun, {[J] COG0828 Ribosomal protein S21}: rpsU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0828 Ribosomal protein S21}: MG_rpsU -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0144 Predicted rRNA methylase}: HI0624, {[J] COG0828 Ribosomal protein S21}: HI0531 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0144 Predicted rRNA methylase}: CT553, {[J] COG0828 Ribosomal protein S21}: CT342 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0144 Predicted rRNA methylase}: PH0851=PH1078=PH1374=PH1537=PH1991 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0828 Ribosomal protein S21}: TP0758 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[J] COG0144 Predicted rRNA methylase}: MJ0026 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0144 Predicted rRNA methylase}: CPn0674, {[J] COG0828 Ribosomal protein S21}: CPn0031 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0828 Ribosomal protein S21}: BB0256 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0828 Ribosomal protein S21}: MP_rpsU -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0144 Predicted rRNA methylase}: Rv1407 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0828 Ribosomal protein S21}: HP0562 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0144 Predicted rRNA methylase}: TM1512 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0828 Ribosomal protein S21}: RP615 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: BS_yuiE, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc -Mycolic Acid |Synechocystis |C |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: sll2001, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: yfhI=pepA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: MG391, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: HIN0292=HI1705 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: CT045 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: CPn0385 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: MP270, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: Rv2213, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: HP0570 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: RP142 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG1079 Uncharacterized ABC-type transport systems, permease components#[N] COG1744 Predicted lipoprotein, Med/BMP family}: AF0888=AF0889=AF0961#AF0890 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: BS_bioF=BS_kbl, {[R] COG1079 Uncharacterized ABC-type transport systems, permease components#[N] COG1744 Predicted lipoprotein, Med/BMP family}: BS_yufP=BS_yufQ#BS_yufN=BS_med -Mycolic Acid |Synechocystis |C |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: slr0917 -Mycolic Acid |Escherichia coli |E |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: bioF=kbl -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG1079 Uncharacterized ABC-type transport systems, permease components#[N] COG1744 Predicted lipoprotein, Med/BMP family}: MG121=MG120#MG040 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HI1553 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CT777 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: PH0292, {[R] COG1079 Uncharacterized ABC-type transport systems, permease components#[N] COG1744 Predicted lipoprotein, Med/BMP family}: PH1711=PH1712#PH1714 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG1079 Uncharacterized ABC-type transport systems, permease components#[N] COG1744 Predicted lipoprotein, Med/BMP family}: TP0301=TP0302=TP0323=TP0322#TP0319=TP0298 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: MJ1298 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CPn1043=CPn0923 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG1079 Uncharacterized ABC-type transport systems, permease components#[N] COG1744 Predicted lipoprotein, Med/BMP family}: BB0316=BB0317=BB0678=BB0679#BB0385=BB0383=BB0382=BB0384=BB0319 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG1079 Uncharacterized ABC-type transport systems, permease components#[N] COG1744 Predicted lipoprotein, Med/BMP family}: MP574=MP575#MP102 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: Rv0032_2=Rv1569 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HP0598 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG1079 Uncharacterized ABC-type transport systems, permease components#[N] COG1744 Predicted lipoprotein, Med/BMP family}: TM0104=TM0105#TM0102 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: RP841 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA, {[R] COG1161 Predicted GTPases}: BS_ylqF=BS_yqeH -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673, {[R] COG1161 Predicted GTPases}: slr0267 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252, {[R] COG1161 Predicted GTPases}: MG442 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG1161 Predicted GTPases}: PH0645 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG1161 Predicted GTPases}: MJ1464 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516, {[R] COG1161 Predicted GTPases}: BB0643 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482, {[R] COG1161 Predicted GTPases}: MP186 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[R] COG1161 Predicted GTPases}: TM0768=TM0848 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0733 Sodium-dependent transporters (SNF family)}: AF1995 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[R] COG0733 Sodium-dependent transporters (SNF family)}: BS_yhdH=BS_yocR -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312, {[R] COG0733 Sodium-dependent transporters (SNF family)}: HI0736=HI1690 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040, {[R] COG0733 Sodium-dependent transporters (SNF family)}: CT231 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0733 Sodium-dependent transporters (SNF family)}: PH1372 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162, {[R] COG0733 Sodium-dependent transporters (SNF family)}: TP0023 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0733 Sodium-dependent transporters (SNF family)}: MJ1319 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0, {[R] COG0733 Sodium-dependent transporters (SNF family)}: CPn0290 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059, {[R] COG0733 Sodium-dependent transporters (SNF family)}: HP0498=HP0497 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BS_pgi, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: slr1349, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MG111, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HI1576, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CT378, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TP0475, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MJ1605 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CPn1025, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BB0730, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MP583, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: Rv0946c, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HP1166, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TM1385, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[R] COG1669 Predicted nucleotidyltransferases}: AF1686 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815, {[R] COG1669 Predicted nucleotidyltransferases}: ssl2749=sll1504=slr1241 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG1669 Predicted nucleotidyltransferases}: MJ0128=MJ1379=MJ1215=MJ0435=MJ1217=MJ0126 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[R] COG1669 Predicted nucleotidyltransferases}: TM0648 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: kdsB#kdtA#ycaH -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: HI0058#HI0652#HI0059 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: CT182#CT208#CT402 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: CPn0235#CPn0154#CPn0529 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: HP0230#HP0957#HP0328 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: RP379#RP089#RP719 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120, {[M] COG0763 Lipid A disaccharide synthetase#[M] COG0774 UDP-3-0-acyl-N-acetylglucosamine deacetylase#[N] COG0848 Biopolymer transport protein ExbD#[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase#[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase}: slr0015#sll1508#sll0479=sll0478=sll1405=slr0678#sll0379#slr0776 -Mycolic Acid |Escherichia coli |E |oneneeded |{[M] COG0763 Lipid A disaccharide synthetase#[M] COG0774 UDP-3-0-acyl-N-acetylglucosamine deacetylase#[N] COG0848 Biopolymer transport protein ExbD#[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase#[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase}: lpxB#lpxC#exbD=tolR#lpxA#lpxD -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[M] COG0763 Lipid A disaccharide synthetase#[M] COG0774 UDP-3-0-acyl-N-acetylglucosamine deacetylase#[N] COG0848 Biopolymer transport protein ExbD#[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase#[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase}: HI1060#HI1144#HI0252=HI0384#HI1061#HI0915 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[M] COG0763 Lipid A disaccharide synthetase#[M] COG0774 UDP-3-0-acyl-N-acetylglucosamine deacetylase#[N] COG0848 Biopolymer transport protein ExbD#[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase#[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase}: CT411#CT533#CT597#CT531#CT243 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[M] COG0763 Lipid A disaccharide synthetase#[M] COG0774 UDP-3-0-acyl-N-acetylglucosamine deacetylase#[N] COG0848 Biopolymer transport protein ExbD#[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase#[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase}: CPn0965#CPn0652#CPn0784#CPn0650#CPn0302 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[M] COG0763 Lipid A disaccharide synthetase#[M] COG0774 UDP-3-0-acyl-N-acetylglucosamine deacetylase#[N] COG0848 Biopolymer transport protein ExbD#[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase#[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase}: HP0867#HP1052#HP1129=HP1340=HP1446#HP1375#HP0196 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[M] COG0763 Lipid A disaccharide synthetase#[M] COG0774 UDP-3-0-acyl-N-acetylglucosamine deacetylase#[N] COG0848 Biopolymer transport protein ExbD#[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase#[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase}: RP321#RP254#RP310#RP007#RP009 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[P] COG0598 Mg and Co transporters}: AF0786 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[P] COG0598 Mg and Co transporters}: BS_yfjQ=BS_yqxL -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[P] COG0598 Mg and Co transporters}: sll0507=sll0671 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[P] COG0598 Mg and Co transporters}: corA=ec1787604 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312, {[P] COG0598 Mg and Co transporters}: HI1035 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[P] COG0598 Mg and Co transporters}: PH0144 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG0598 Mg and Co transporters}: MJ1033 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[P] COG0598 Mg and Co transporters}: Rv1239c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059, {[P] COG0598 Mg and Co transporters}: HP1344 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[P] COG0598 Mg and Co transporters}: TM0561 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[R] COG1923 Uncharacterized ACR, host factor I protein Hfq}: BS_ymaH -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[R] COG1923 Uncharacterized ACR, host factor I protein Hfq}: hfq -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[R] COG1923 Uncharacterized ACR, host factor I protein Hfq}: HI0411 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG1923 Uncharacterized ACR, host factor I protein Hfq}: MJ1435 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[R] COG1923 Uncharacterized ACR, host factor I protein Hfq}: TM0526 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA, {[G] COG0469 Pyruvate kinase}: BS_pykA_1 -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673, {[G] COG0469 Pyruvate kinase}: sll0587=sll1275_1 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU, {[G] COG0469 Pyruvate kinase}: pykF=pykA=ec1788578=yhaF -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252, {[G] COG0469 Pyruvate kinase}: MG216 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424, {[G] COG0469 Pyruvate kinase}: HI1573 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403, {[G] COG0469 Pyruvate kinase}: CT332 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[G] COG0469 Pyruvate kinase}: PH0570 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0469 Pyruvate kinase}: MJ0108 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530, {[G] COG0469 Pyruvate kinase}: CPn0097 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516, {[G] COG0469 Pyruvate kinase}: BB0348 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482, {[G] COG0469 Pyruvate kinase}: MP534 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c, {[G] COG0469 Pyruvate kinase}: Rv1617 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[G] COG0469 Pyruvate kinase}: TM0208 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG2245 Uncharacterized membrane protein}: PH1319 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG2245 Uncharacterized membrane protein}: MJ1644 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[S] COG2245 Uncharacterized membrane protein}: TM1675 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0144 Predicted rRNA methylase}: AF0853=AF2039=AF2324 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0144 Predicted rRNA methylase}: BS_yloM, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0144 Predicted rRNA methylase}: slr0679, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0144 Predicted rRNA methylase}: HI0624, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0144 Predicted rRNA methylase}: CT553, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0144 Predicted rRNA methylase}: PH0851=PH1078=PH1374=PH1537=PH1991 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[J] COG0144 Predicted rRNA methylase}: MJ0026 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0144 Predicted rRNA methylase}: CPn0674, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0144 Predicted rRNA methylase}: Rv1407, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0144 Predicted rRNA methylase}: TM1512, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1479 Uncharacterized ACR}: PH0009 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1479 Uncharacterized ACR}: MJ0686 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553, {[S] COG1479 Uncharacterized ACR}: HP0629=HP0513=HP0426=HP1409=HP1397 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[S] COG1479 Uncharacterized ACR}: TM0991 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases}: BS_yveM=BS_yodU=BS_ypqP -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595, {[MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases}: TP0077 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases}: MJ1061 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618, {[MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases}: HP0840 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases}: TM1548 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638, {[MG] COG1086 Predicted nucleoside-diphosphate sugar epimerases}: RP333 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: AF2178 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: BS_ypsC, {[I] COG0736 Acyl-carrier protein synthase}: BS_ydcB -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: slr0064 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: ycbY_1, {[I] COG0736 Acyl-carrier protein synthase}: dpj -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: MG211.1 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: HIN1253+2_1 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: CT100 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: PH0644 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: TP0828 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: MJ0438 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: CPn0313 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: BB0010 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: MP539 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: Rv2523c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: HP0808 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: TM0692 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[I] COG0736 Acyl-carrier protein synthase}: RP577 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558, {[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: AF2374 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120, {[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: slr0195=slr0505 -Mycolic Acid |Escherichia coli |E |oneneeded |{[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: tolB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: HI0382 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: CT599 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: CPn0782 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: HP1126 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: RP302 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[L] COG1059 Endonuclease III-related proteins}: AF0371 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[L] COG1059 Endonuclease III-related proteins}: MJ0724 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[L] COG1059 Endonuclease III-related proteins}: TM1821 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: BS_htpG#BS_dal=BS_yncD, {[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM -Mycolic Acid |Synechocystis |C |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: sll0430#slr0827, {[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[R] COG0600 Uncharacterized permeases}: tauC=ycbM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: HI0104#HI1575, {[R] COG0600 Uncharacterized permeases}: HI0355 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0600 Uncharacterized permeases}: CT854_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: TP0984#TP0681 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0600 Uncharacterized permeases}: CPn1012_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: BB0560#BB0160, {[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: Rv2299c#Rv3423c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: HP0210#HP0941 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: RP840#RP095 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[H] COG1424 Pimeloyl-CoA synthetase}: BS_bioW -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[H] COG1424 Pimeloyl-CoA synthetase}: MJ1297 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG1533 Uncharacterized ACR}: AF1589=AF1583=AF0902 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[S] COG1533 Uncharacterized ACR}: slr0285 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1533 Uncharacterized ACR}: PH1468 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1533 Uncharacterized ACR}: MJ0683 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[S] COG1533 Uncharacterized ACR}: Rv2578c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[S] COG1533 Uncharacterized ACR}: TM0117 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: AF1415_1#AF2342=AF1075=AF1080=AF1093 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: sll0855=slr0617=sll1864_1#slr0664, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: yadQ=ec1787876#relE, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: PH0032#PHs013=PHs016 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: MJ0305#MJ0071=MJ0909=MJ1103 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: Rv0143c#Rv1246c=Rv2866, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0218 Predicted GTPases}: BS_ysxC, {[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: BS_cwlC=BS_cwlD=BS_lytC_2=BS_yqiI=BS_yrvJ -Mycolic Acid |Synechocystis |C |oneneeded |{[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: slr0891=slr1910=slr1744_2 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: ygdN=amiB=amiA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0218 Predicted GTPases}: MG335 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0218 Predicted GTPases}: HI1118, {[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: HI0066_1 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: CT268 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: TP0247 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: CPn0417 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: BB0666=BB0625_2 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0218 Predicted GTPases}: MP359 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: Rv3717=Rv3915 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0218 Predicted GTPases}: HP1567, {[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: HP0772 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0218 Predicted GTPases}: TM1466 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[F] COG0213 Thymidine phosphorylase}: AF1341=AF1342 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[F] COG0213 Thymidine phosphorylase}: BS_pdp, {[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: BS_expZ=BS_ydiF=BS_yfmM=BS_yfmR=BS_ykpA -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: sll0912=slr0864 -Mycolic Acid |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: ybiT=uup=yjjK=yheS -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MG051 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: HI1252=HI0658=HI1300=HI1342 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: CT348 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[F] COG0213 Thymidine phosphorylase}: PH1598 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: TP0838 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MJ0667 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: CPn0023 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: BB0742 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MP090 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[F] COG0213 Thymidine phosphorylase}: Rv3314c, {[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: Rv1473=Rv1667c=Rv1668c=Rv2477c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: HP0853 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[F] COG0213 Thymidine phosphorylase}: TM1653 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: RP060 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: AF0887 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: BS_bioF=BS_kbl, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: BS_rbsA=BS_yufO -Mycolic Acid |Synechocystis |C |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: slr0917 -Mycolic Acid |Escherichia coli |E |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: bioF=kbl, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: MG119 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HI1553, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: HI0823=HI0502=HI1110 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CT777 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: PH0292, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: PH1713 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: TP0300=TP0321=TP0685 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: MJ1298 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: CPn1043=CPn0923 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: BB0677=BB0318 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: MP576 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: Rv0032_2=Rv1569 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: HP0598 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: TM0115=TM0103=TM0956 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: RP841 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: BS_yqiE -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: sll1945 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: dxs -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: HI1439 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: CT331 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: TP0824 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: MJ0679 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: CPn1060 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: Rv2682c=Rv3379c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: HP0354 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: TM1770=TM0953 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: AF2303 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: BS_miaA#BS_ypfD#BS_papS#BS_hemN=BS_yhaV#BS_murG=BS_ypfP=BS_ykoN#BS_clpP#BS_ylbH# BS_polA_2#BS_murA=BS_murZ#BS_pbpA=BS_pbpB=BS_pbpC=BS_spoVD=BS_ykuA=BS_yrrR#BS_sp oVE=BS_ylaO=BS_ywcF#BS_murC#BS_yqhZ#BS_yqeL#BS_ydiB#BS_murB#BS_ddlA#BS_pnpA#BS_p rfB#BS_ytzG=BS_ypuL=BS_ytzF#BS_mfd#BS_priA#BS_clpX#BS_yugS=BS_yhdP=BS_yrkA=BS_yq hB=BS_yhdT#BS_ctc -Mycolic Acid |Synechocystis |C |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: slr1238, {[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: sll0817#slr1356=slr1984#sll0825=sll1253_3#sll1876=sll1917#slr1656#sll0534=slr016 4=slr0165=slr0542#slr0383#slr0707_2#slr0017#sll1833#slr1267#slr1423#sll0271#slr1 886#sll0257#slr1424#slr1874#sll1043#sll1865#slr0361=slr0612#sll0377#sll0270#sll0 535#sll0260=sll1254#sll1824 -Mycolic Acid |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: miaA#rpsA#pcnB=cca#hemN=yggW#murG#clpP#yhhF#polA_2#murZ#ftsI=mrdA#ftsW=mrdB#murC =yjfG#nusB#ybeB#yjeE#murB#ddlA=ddlB#pnp#prfB#yjbC=yciL=yejD=ymfC#mfd#priA#clpX#y beX=ytfL=ypjE=yoaE_2=yfjD=yegH_2#rplY -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: MG012 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: HI1531, {[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: HI0068#HI1220#HI1606=HI0063#HI0463#HI1138#HI0714#HI0767#HI0856_2#HI1081#HI1132=H I0032#HI1137=HI0031#HI1139=HI0121#HI1304#HI0034#HI0065#HI0268#HI1140#HI0229#HIN0 621#HI1199=HI1243=HI0694#HI1258#HI0339#HI0715#HI0301=HI0452=HI0107#HI1630 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: CT766#CT098#CT410=CT704#CT746=CT052#CT761#CT431=CT706#CT487#CT493_2#CT455#CT270= CT682#CT726=CT760#CT762_1#CT832#CT769#CT537#CT831#CT762_2#CT842#CT459#CT723#CT74 8#CT778#CT705#CT256=CT257=CT423#CT799 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: PH1721 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: TP0637#TP0279_2#TP0270=TP0596#TP0186#TP0523#TP1041=TP0507#TP0065#TP0105_2#TP0029 #TP0760=TP0500#TP0501=TP0387#TP0341#TP1015#TP0738#TP0875#TP0090#TP0670#TP0886#TP 0576#TP0459#TP0344#TP0230#TP0508#TP0649=TP0027=TP0028=TP0936#TP0372 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: MJ0620=MJ1001 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: CPn0910#CPn0315#CPn0845=CPn0966#CPn0380=CPn0889#CPn0904#CPn0847=CPn0520#CPn0605# CPn0612_2#CPn0571#CPn0694=CPn0419#CPn0867=CPn0903#CPn0905_1#CPn0989#CPn0915#CPn0 657#CPn0988#CPn0905_2#CPn0999#CPn_prfB#CPn0864#CPn0891#CPn0924#CPn0846#CPn0394=C Pn0395=CPn0510#CPn0949 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: BB0821#BB0127#BB0706#BB0656#BB0767#BB0611=BB0757#BB0206#BB0548_2#BB0472#BB0136=B B0718#BB0302=BB0719#BB0817#BB0107#BB0784#BB0186#BB0598#BB0200#BB0805#BB0074#BB01 29#BB0623#BB0014#BB0612#BB0202=BB0059#BB0786 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: MP138 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: Rv2727c#Rv1630#Rv3907c#Rv2388c#Rv2153c#Rv2460c=Rv2461c#Rv2966c#Rv1629_2#Rv1315#R v0016c=Rv2163c=Rv2864c#Rv0017c=Rv2154c#Rv2152c#Rv2533c#Rv2420c#Rv3422c#Rv0482#Rv 2981c#Rv2783c#Rv3105c#Rv1711#Rv1020#Rv1402#Rv2457c#Rv1842c=Rv1841c=Rv2366c#Rv101 5c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: HP1415#HP0399#HP0640#HP0665=HP1226#HP1155#HP0794#HP0810#HP1470_2#HP0648#HP1556=H P1565#HP1560=HP0743#HP0623#HP0001#HP1414#HP0716#HP1418#HP0738#HP1213#HP0171#HP14 59#HP1541#HP0387#HP1374#HP1490#HP1496 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: TM0525#TM1445#TM0715_3#TM1166#TM0232#TM0695#TM1388#TM1619_2#TM0108#TM0590=TM0870 #TM0233=TM0839#TM0231#TM1765#TM0147#TM1632#TM1714#TM0259#TM1345#TM1579#TM0264#TM 1450#TM0178#TM0146#TM0845=TM1833#TM1627 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: RP510#RP521#RP015#RP175#RP412#RP520#RP545#RP776_2#RP579#RP565=RP567#RP411=RP280# RP247#RP162#RP811#RP013#RP248#RP249#RP504#RP274#RP544#RP598#RP540#RP692#RP702=RP 740#RP606 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG1106 Predicted ATPases}: PH0155 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG1106 Predicted ATPases}: MJECL10=MJECL11 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553, {[R] COG1106 Predicted ATPases}: HP1079 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[C] COG1042 Acyl-CoA synthetases}: AF0932=AF1192=AF1211=AF1938=AF1511_2 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[C] COG1042 Acyl-CoA synthetases}: yfiQ_1 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[C] COG1042 Acyl-CoA synthetases}: PH0625=PH0766=PH1517=PH1739=PH1788=PH1789=PH1928 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[C] COG1042 Acyl-CoA synthetases}: MJ0590 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc, {[O] COG1495 Disulfide bond formation protein DsbB}: BS_yolK=BS_yvgU -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[O] COG1495 Disulfide bond formation protein DsbB}: dsbB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[O] COG1495 Disulfide bond formation protein DsbB}: HI0428 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[O] COG1495 Disulfide bond formation protein DsbB}: CT176 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[O] COG1495 Disulfide bond formation protein DsbB}: CPn0227 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[O] COG1495 Disulfide bond formation protein DsbB}: HP0595 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[O] COG1495 Disulfide bond formation protein DsbB}: RP370 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0218 Predicted GTPases}: BS_ysxC, {[S] COG0658 Uncharacterized BCR, ComEC family}: BS_comEC_1 -Mycolic Acid |Synechocystis |C |oneneeded |{[S] COG0658 Uncharacterized BCR, ComEC family}: sll1929_1 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[S] COG0658 Uncharacterized BCR, ComEC family}: ycaI_1 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0218 Predicted GTPases}: MG335, {[S] COG0658 Uncharacterized BCR, ComEC family}: MG316 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0218 Predicted GTPases}: HI1118, {[S] COG0658 Uncharacterized BCR, ComEC family}: HI0061_1 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[S] COG0658 Uncharacterized BCR, ComEC family}: CT339 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[S] COG0658 Uncharacterized BCR, ComEC family}: TP0336 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[S] COG0658 Uncharacterized BCR, ComEC family}: CPn0035 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[S] COG0658 Uncharacterized BCR, ComEC family}: BB0591 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0218 Predicted GTPases}: MP359, {[S] COG0658 Uncharacterized BCR, ComEC family}: MP389 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[S] COG0658 Uncharacterized BCR, ComEC family}: Rv2414c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0218 Predicted GTPases}: HP1567, {[S] COG0658 Uncharacterized BCR, ComEC family}: HP1361 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0218 Predicted GTPases}: TM1466, {[S] COG0658 Uncharacterized BCR, ComEC family}: TM1775 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[C] COG0281 Malic enzyme}: AF1727 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BS_pgi, {[C] COG0281 Malic enzyme}: BS_malS=BS_yqkJ=BS_ytsJ=BS_ywkA -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: slr1349, {[C] COG0281 Malic enzyme}: slr0721 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[C] COG0281 Malic enzyme}: sfcA=ec1788806_1 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MG111 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HI1576, {[C] COG0281 Malic enzyme}: HI1245_1 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CT378 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[C] COG0281 Malic enzyme}: PH1275 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TP0475 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MJ1605 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CPn1025 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BB0730 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MP583 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: Rv0946c, {[C] COG0281 Malic enzyme}: Rv2332 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HP1166 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TM1385, {[C] COG0281 Malic enzyme}: TM0542 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[C] COG0281 Malic enzyme}: RP373_1 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: AF1415_1#AF2342=AF1075=AF1080=AF1093 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: BS_rpmF#BS_gidA#BS_thdF -Mycolic Acid |Synechocystis |C |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: sll0855=slr0617=sll1864_1#slr0664, {[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: ssr1736#sll0202#sll1615 -Mycolic Acid |Escherichia coli |E |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: yadQ=ec1787876#relE, {[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: rpmF#gidA#thdF -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: MG363#MG379#MG008 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: HI0158#HI0582#HI1002 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: CT810#CT498#CT698 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: PH0032#PHs013=PHs016 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: TP0807#TP0044#TP0550 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: MJ0305#MJ0071=MJ0909=MJ1103 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: CPn0961#CPn0617#CPn0838 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: BB0703#BB0178#BB0179 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: MP302#MP285#MP146 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[P] COG0038 Permease, putative chloride channel#[S] COG2026 Uncharacterized ACR, RelE homolog}: Rv0143c#Rv1246c=Rv2866 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: HP0200#HP0213#HP1452 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: TM0150#TM0263#TM0267 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: RP773#RP056#RP759 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0693 Putative intracellular protease/amidase}: AF1281 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[R] COG0693 Putative intracellular protease/amidase}: BS_yfkM=BS_yraA=BS_yoaZ=BS_ydeA -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[R] COG0693 Putative intracellular protease/amidase}: slr1854 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG0693 Putative intracellular protease/amidase}: yhbO=thiJ=yedU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359, {[R] COG0693 Putative intracellular protease/amidase}: MG029 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0693 Putative intracellular protease/amidase}: PH1704 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162, {[R] COG0693 Putative intracellular protease/amidase}: TP0445 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0693 Putative intracellular protease/amidase}: MJ0967 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022, {[R] COG0693 Putative intracellular protease/amidase}: BB0621 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306, {[R] COG0693 Putative intracellular protease/amidase}: MP122=MP542 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[R] COG0693 Putative intracellular protease/amidase}: Rv0052 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558, {[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: AF0632 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc, {[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: BS_yutI -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120, {[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: ssl2667 -Mycolic Acid |Escherichia coli |E |oneneeded |{[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: yhgI_2 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: HI0433_2 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: CT720_2 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: CPn0861_2 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: HP1492=HP0221_2 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: RP667 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc, {[L] COG1570 Exonuclease VII, large subunit}: BS_yqiB -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG1570 Exonuclease VII, large subunit}: xseA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG1570 Exonuclease VII, large subunit}: HI0397 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG1570 Exonuclease VII, large subunit}: CT329 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG1570 Exonuclease VII, large subunit}: CPn1062 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c, {[L] COG1570 Exonuclease VII, large subunit}: Rv1108c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG1570 Exonuclease VII, large subunit}: HP0259=HP0981 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182, {[L] COG1570 Exonuclease VII, large subunit}: TM1768 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG1570 Exonuclease VII, large subunit}: RP675 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0218 Predicted GTPases}: BS_ysxC, {[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: BS_gntZ=BS_yqjI -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: sll0329 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: gnd -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0218 Predicted GTPases}: MG335 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0218 Predicted GTPases}: HI1118, {[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: HI0553 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: CT063 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: TP0331 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: CPn0360 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: BB0561 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0218 Predicted GTPases}: MP359 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: Rv1844c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0218 Predicted GTPases}: HP1567 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0218 Predicted GTPases}: TM1466, {[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: TM0438 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: BS_nrdF=BS_yosP, {[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM -Mycolic Acid |Synechocystis |C |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: slr0591, {[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: nrdF=nrdB, {[R] COG0600 Uncharacterized permeases}: tauC=ycbM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: MG229, {[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: HI1660, {[R] COG0600 Uncharacterized permeases}: HI0355 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: CT828, {[R] COG0600 Uncharacterized permeases}: CT854_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: TP0053 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: CPn0985, {[R] COG0600 Uncharacterized permeases}: CPn1012_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: MP515, {[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: Rv0233=Rv1981c=Rv3048c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: HP0364 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: RP512 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[P] COG1116 ABC-type nitrate transport system, ATPase component}: AF0638=AF0087 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[P] COG1116 ABC-type nitrate transport system, ATPase component}: BS_ygaL=BS_ytlC -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815, {[P] COG1116 ABC-type nitrate transport system, ATPase component}: sll1082=sll1453=slr0044=sll1452_1=slr0043_1 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[P] COG1116 ABC-type nitrate transport system, ATPase component}: tauB=ycbE -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[P] COG1116 ABC-type nitrate transport system, ATPase component}: HI0354 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG1116 ABC-type nitrate transport system, ATPase component}: MJ0412 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[P] COG1116 ABC-type nitrate transport system, ATPase component}: TM0204=TM0483 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: AF0430=AF1401 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: BS_fhuC=BS_yusV=BS_yvrA=BS_yfmF=BS_yclP -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: slr1318 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: fepC=fecE=fhuC=btuD -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: MG290 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: HI1470=HI1272 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: PH1235=PH0791 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: MJ0873=MJ0089 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: MP423 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: HP0888 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: TM0078=TM0191 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA, {[S] COG2105 Uncharacterized ACR, YkqA family}: BS_ykqA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU, {[S] COG2105 Uncharacterized ACR, YkqA family}: ytfP -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG2105 Uncharacterized ACR, YkqA family}: PH0828 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG2105 Uncharacterized ACR, YkqA family}: MJ1514 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[P] COG1275 Tellurite resistance protein and related permeases}: AF0347 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[P] COG1275 Tellurite resistance protein and related permeases}: tehA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312, {[P] COG1275 Tellurite resistance protein and related permeases}: HI0511 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[P] COG1275 Tellurite resistance protein and related permeases}: PH0884 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG1275 Tellurite resistance protein and related permeases}: MJ0576=MJ0762 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[P] COG1275 Tellurite resistance protein and related permeases}: Rv1735c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673, {[G] COG1449 Alpha-amylase/alpha-mannosidase#[O] COG2192 Predicted carbamoyl transferase, NodU family}: slr0337#sll1178 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[G] COG1449 Alpha-amylase/alpha-mannosidase#[O] COG2192 Predicted carbamoyl transferase, NodU family}: PH0193#PH1253 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG1449 Alpha-amylase/alpha-mannosidase#[O] COG2192 Predicted carbamoyl transferase, NodU family}: MJ1611#MJ1051=MJ1058 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG1354 Uncharacterized ACR}: AF1559 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[S] COG1354 Uncharacterized ACR}: BS_ypuG -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[S] COG1354 Uncharacterized ACR}: slr1530 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359, {[S] COG1354 Uncharacterized ACR}: MG213_2 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1354 Uncharacterized ACR}: PH1797 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162, {[S] COG1354 Uncharacterized ACR}: TP0691 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1354 Uncharacterized ACR}: MJ1134 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306, {[S] COG1354 Uncharacterized ACR}: MP537_2 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[S] COG1354 Uncharacterized ACR}: Rv1709 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[S] COG1354 Uncharacterized ACR}: TM0493 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[E] COG0145 N-methylhydaintoinase A}: AF0906, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[E] COG0145 N-methylhydaintoinase A}: slr0697_1, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[E] COG0145 N-methylhydaintoinase A}: MJ0964 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[E] COG0145 N-methylhydaintoinase A}: Rv0266c_1, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[E] COG0145 N-methylhydaintoinase A}: HP0695, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc, {[S] COG1862 Uncharacterized secreted proteins, YajC family}: BS_yrbF -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[S] COG1862 Uncharacterized secreted proteins, YajC family}: yajC -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[S] COG1862 Uncharacterized secreted proteins, YajC family}: HI0241 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[S] COG1862 Uncharacterized secreted proteins, YajC family}: CT741 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[S] COG1862 Uncharacterized secreted proteins, YajC family}: CPn0884 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045, {[S] COG1862 Uncharacterized secreted proteins, YajC family}: BB0651 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c, {[S] COG1862 Uncharacterized secreted proteins, YajC family}: Rv2588c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[S] COG1862 Uncharacterized secreted proteins, YajC family}: HP1551 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182, {[S] COG1862 Uncharacterized secreted proteins, YajC family}: TM0859 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[S] COG1862 Uncharacterized secreted proteins, YajC family}: RP585 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[F] COG0213 Thymidine phosphorylase}: AF1341=AF1342 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[F] COG0213 Thymidine phosphorylase}: BS_pdp -Mycolic Acid |Synechocystis |C |oneneeded |{[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: slr1227#slr0882=sll0496#slr0251 -Mycolic Acid |Escherichia coli |E |oneneeded |{[F] COG0213 Thymidine phosphorylase}: deoA, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MG051 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: HI0698=HI0917#HI1704=HI1703#HI1148 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: CT241#CT838=CT839#CT653 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[F] COG0213 Thymidine phosphorylase}: PH1598 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: TP0326#TP0883=TP0884#TP0786 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MJ0667 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: CPn0300#CPn0995=CPn0996#CPn0723 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: BB0795#BB0807=BB0808#BB0466 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MP090 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[F] COG0213 Thymidine phosphorylase}: Rv3314c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: HP0655#HP0362=HP1498#HP0715 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[F] COG0213 Thymidine phosphorylase}: TM1653, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: TM0448#TM1735#TM1054 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: RP160#RP769=RP871#RP508 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG0727 Uncharacterized ACR}: AF0486=AF1438=AF1895=AF2306=AF0445 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[S] COG0727 Uncharacterized ACR}: slr0022 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG0727 Uncharacterized ACR}: PH1693=PH1864 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG0727 Uncharacterized ACR}: MJ0661=MJ0939 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[S] COG0727 Uncharacterized ACR}: Rv2184c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059, {[S] COG0727 Uncharacterized ACR}: HP0764_2=HP0274 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG1624 Uncharacterized ACR}: AF1759 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[S] COG1624 Uncharacterized ACR}: BS_ybbP=BS_yojJ -Mycolic Acid |Synechocystis |C |oneneeded |{[FP] COG0248 Exopolyphosphatase}: sll1546, {[S] COG1624 Uncharacterized ACR}: sll0505 -Mycolic Acid |Escherichia coli |E |oneneeded |{[FP] COG0248 Exopolyphosphatase}: gppA=ppx -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[S] COG1624 Uncharacterized ACR}: MG105 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[FP] COG0248 Exopolyphosphatase}: HI0695 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[S] COG1624 Uncharacterized ACR}: CT012 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1624 Uncharacterized ACR}: PH1015 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[S] COG1624 Uncharacterized ACR}: TP0826 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1624 Uncharacterized ACR}: MJ1002 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[S] COG1624 Uncharacterized ACR}: CPn0101 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[S] COG1624 Uncharacterized ACR}: BB0008 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[S] COG1624 Uncharacterized ACR}: MP589 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[FP] COG0248 Exopolyphosphatase}: Rv0496=Rv1026 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[FP] COG0248 Exopolyphosphatase}: HP0278 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[FP] COG0248 Exopolyphosphatase}: TM0195 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[FP] COG0248 Exopolyphosphatase}: RP294 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[M] COG1861 Spore coat polysaccharide biosynthesis protein F (SpsF), CMP-KDO synthetase homolog}: BS_spsF -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595, {[M] COG1861 Spore coat polysaccharide biosynthesis protein F (SpsF), CMP-KDO synthetase homolog}: TP0288 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[M] COG1861 Spore coat polysaccharide biosynthesis protein F (SpsF), CMP-KDO synthetase homolog}: MJ1063 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: AF2303 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: slr1238 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359, {[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: MG012 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312, {[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: HI1531 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: PH1721 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: MJ0620=MJ1001 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306, {[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: MP138 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA, {[G] COG0297 Glycogen synthase}: BS_glgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673, {[G] COG0297 Glycogen synthase}: sll0945=sll1393 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU, {[G] COG0297 Glycogen synthase}: glgA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424, {[G] COG0297 Glycogen synthase}: HI1360 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403, {[G] COG0297 Glycogen synthase}: CT798 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[G] COG0297 Glycogen synthase}: PH0069 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0297 Glycogen synthase}: MJ1606 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530, {[G] COG0297 Glycogen synthase}: CPn0948 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[G] COG0297 Glycogen synthase}: TM0895 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[C] COG1227 Exopolyphosphatase}: AF0756 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[C] COG1227 Exopolyphosphatase}: BS_yybQ -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[C] COG1227 Exopolyphosphatase}: MJ0608 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[C] COG1227 Exopolyphosphatase}: TM0587_1=TM0587_3 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU, {[L] COG0863 Adenine-specific DNA methylase}: yhdJ -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424, {[L] COG0863 Adenine-specific DNA methylase}: HI1392 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[L] COG0863 Adenine-specific DNA methylase}: PH0584 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[L] COG0863 Adenine-specific DNA methylase}: MJ1209m_1=MJ1448=MJ1498=MJ0985 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553, {[L] COG0863 Adenine-specific DNA methylase}: HP0050=HP0263=HP0092=HP1352=HP1367=HP1368 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[L] COG0863 Adenine-specific DNA methylase}: TM0328 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0733 Sodium-dependent transporters (SNF family)}: AF1995 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[C] COG0280 Phosphotransacetylase}: BS_pta=BS_yqiS, {[R] COG0733 Sodium-dependent transporters (SNF family)}: BS_yhdH=BS_yocR -Mycolic Acid |Synechocystis |C |oneneeded |{[C] COG0280 Phosphotransacetylase}: slr2132_2 -Mycolic Acid |Escherichia coli |E |oneneeded |{[C] COG0280 Phosphotransacetylase}: pta_2=eutI=ec1788806_2 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[C] COG0280 Phosphotransacetylase}: MG299 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[C] COG0280 Phosphotransacetylase}: HI1203_2=HI1245_2, {[R] COG0733 Sodium-dependent transporters (SNF family)}: HI0736=HI1690 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0733 Sodium-dependent transporters (SNF family)}: CT231 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0733 Sodium-dependent transporters (SNF family)}: PH1372 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[C] COG0280 Phosphotransacetylase}: TP0094, {[R] COG0733 Sodium-dependent transporters (SNF family)}: TP0023 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0733 Sodium-dependent transporters (SNF family)}: MJ1319 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0733 Sodium-dependent transporters (SNF family)}: CPn0290 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[C] COG0280 Phosphotransacetylase}: BB0589 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[C] COG0280 Phosphotransacetylase}: MP412 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[C] COG0280 Phosphotransacetylase}: Rv0408_2 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0733 Sodium-dependent transporters (SNF family)}: HP0498=HP0497 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[C] COG0280 Phosphotransacetylase}: TM1130=TM1755 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[C] COG0280 Phosphotransacetylase}: RP109=RP373_2 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG1487 Uncharacterized proteins, VapC family}: AF1690=AF1479 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[S] COG1487 Uncharacterized proteins, VapC family}: sll0690=ssl2923 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312, {[S] COG1487 Uncharacterized proteins, VapC family}: HI0322=HI0947 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1487 Uncharacterized proteins, VapC family}: PH0500=PH0708 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1487 Uncharacterized proteins, VapC family}: MJ0914 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[S] COG1487 Uncharacterized proteins, VapC family}: Rv2548=Rv1397c=Rv0627=Rv0595c=Rv0665 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1993 Uncharacterized ACR}: PH1503 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1993 Uncharacterized ACR}: MJ1524 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c, {[S] COG1993 Uncharacterized ACR}: Rv3071 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[S] COG1993 Uncharacterized ACR}: TM0021 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673, {[L] COG0338 Site-specific DNA methylase dam}: slr1803=sll0729 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU, {[L] COG0338 Site-specific DNA methylase dam}: dam -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424, {[L] COG0338 Site-specific DNA methylase dam}: HI0209 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[L] COG0338 Site-specific DNA methylase dam}: PH1032 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109, {[L] COG0338 Site-specific DNA methylase dam}: TP0810 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[L] COG0338 Site-specific DNA methylase dam}: MJ0598 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553, {[L] COG0338 Site-specific DNA methylase dam}: HP0481 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[G] COG0647 Predicted sugar phosphatases of the HAD superfamily}: AF0374 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BS_pgi, {[G] COG0647 Predicted sugar phosphatases of the HAD superfamily}: BS_araL=BS_yutF -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: slr1349 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[G] COG0647 Predicted sugar phosphatases of the HAD superfamily}: nagD -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MG111 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HI1576 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CT378 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[G] COG0647 Predicted sugar phosphatases of the HAD superfamily}: PH1952 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TP0475 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MJ1605 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CPn1025 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BB0730 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MP583 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: Rv0946c, {[G] COG0647 Predicted sugar phosphatases of the HAD superfamily}: Rv1225c=Rv1692 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HP1166 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TM1385, {[G] COG0647 Predicted sugar phosphatases of the HAD superfamily}: TM1742 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[G] COG0647 Predicted sugar phosphatases of the HAD superfamily}: RP581 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[S] COG2215 Predicted membrane protein}: yohM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[S] COG2215 Predicted membrane protein}: HI1248 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595, {[S] COG2215 Predicted membrane protein}: TP0558 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG2215 Predicted membrane protein}: MJ1092 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: BS_yrrA#BS_yaaK, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: sll0844#slr1847, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: ycfB#ybaB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: MG295#MG134, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: HI0174#HI0442 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: CT287#CT335 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: CPn0438#CPn0039 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: BB0682#BB0462, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: MP418#MP561, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: Rv3024c#Rv3716c, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: HP0013=HP1335#HP0035 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: TM0520#TM0687, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: RP306#RP866 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: BS_spoIIQ=BS_yunA=BS_yomI_4=BS_spoIVFA=BS_yaaH_1#BS_pbpD=BS_pbpF=BS_ponA=BS_ywhE #BS_ylxS#BS_ylqE#BS_ylpB#BS_yqeU -Mycolic Acid |Synechocystis |C |oneneeded |{[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: slr0993=slr0878=slr1708=sll1488#sll0002_2=sll1434=slr1710#slr0742#slr0808#slr002 0#slr0722 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0600 Uncharacterized permeases}: tauC=ycbM, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0600 Uncharacterized permeases}: HI0355, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: HI0706=HI0756=HI0409#HI0831=HI1725=HI0440#HI1282#HI0203#HI1740#HI0303 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[R] COG0600 Uncharacterized permeases}: CT854_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: TP0155=TP0444=TP0049=TP0864=TP0706=TP0702=TP0782#TP0705#TP0893#TP0907#TP0687#TP0 276=TP0032 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[R] COG0600 Uncharacterized permeases}: CPn1012_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: BB0246=BB0255=BB0262=BB0761#BB0732#BB0799#BB0697#BB0581#BB0358=BB0062 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: Rv0950c=Rv2891=Rv3786c=Rv1288_1#Rv0050=Rv3682#Rv2842c#Rv2907c#Rv2973c#Rv2372c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: HP1544=HP1543=HP0506#HP0597#HP1046#HP1149#HP1523#HP0374 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: TM1660=TM0409#TM0886#TM1778#TM1568#TM0205#TM1380 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: RP407=RP300#RP807#RP554#RP348#RP593#RP168 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: AF2303 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: BS_rho#BS_ytxE=BS_motB -Mycolic Acid |Synechocystis |C |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: slr1238 -Mycolic Acid |Escherichia coli |E |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: MG012 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: HI1531, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: HI0295#HI0381=HI1164 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: CT491#CT600 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: PH1721 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: TP0254#TP0292=TP0724=TP0624 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: MJ0620=MJ1001 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: CPn0610#CPn0781 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: BB0230#BB0167=BB0280 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: MP138 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: Rv1297_2#Rv0899 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: HP0550#HP1125=HP0816 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: TM1470#TM0677 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: RP526#RP771 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[N] COG1952 Preprotein translocase subunit SecB}: secB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[N] COG1952 Preprotein translocase subunit SecB}: HI0743 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[N] COG1952 Preprotein translocase subunit SecB}: MJ0357 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638, {[N] COG1952 Preprotein translocase subunit SecB}: RP070 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: AF0530#AF0465#AF2399 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BS_grlB=BS_gyrB#BS_grlA=BS_gyrA#BS_yacO=BS_ysgA, {[R] COG2252 Permeases}: BS_yebB=BS_ytiP -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: sll2005_1=sll2005_3#sll1941=slr0417#slr0955=slr1673 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU, {[R] COG2252 Permeases}: yjcD=ygfR=ygfQ=yicO=yieG -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MG003=MG203#MG004=MG204#MG252 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HI0567=HI1528#HI1264=HI1529#HI0860=HI0424, {[R] COG2252 Permeases}: HI0125 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CT190=CT661#CT189=CT660#CT403 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG2252 Permeases}: PH1162 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TP1006#TP0005#TP0054=TP0109, {[R] COG2252 Permeases}: TP_yieG -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG2252 Permeases}: MJ0326 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: CPn0275=CPn0715#CPn0274=CPn0716#CPn0530 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: BB0036=BB0436#BB0035=BB0435#BB0052=BB0516, {[R] COG2252 Permeases}: BBB23=BBB22 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: MP033=MP151#MP032=MP150#MP482 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: Rv0005#Rv0006#Rv0380c=Rv0881=Rv1644=Rv3579c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: HP0501#HP0701#HP0553, {[R] COG2252 Permeases}: HP1175 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: TM0833#TM1084#TM1741, {[R] COG2252 Permeases}: TM0594 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: RP227=RP580#RP206=RP067#RP664 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0176 Transaldolase}: BS_ywjH, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0176 Transaldolase}: slr1793, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0176 Transaldolase}: mipB=talA=talC=talB, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0176 Transaldolase}: HI1125, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0176 Transaldolase}: CT313, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0176 Transaldolase}: MJ0960 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0176 Transaldolase}: CPn0083, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0176 Transaldolase}: Rv1448c, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0176 Transaldolase}: HP1495, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0176 Transaldolase}: TM0295, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[R] COG1242 Uncharacterized FeS oxidoreductases}: BS_ytqA -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[R] COG1242 Uncharacterized FeS oxidoreductases}: yhcC -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG1242 Uncharacterized FeS oxidoreductases}: MJ0486 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[R] COG1242 Uncharacterized FeS oxidoreductases}: TM0515 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[L] COG0827 Adenine-specific DNA methyltransferases}: BS_ytxK -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349, {[L] COG0827 Adenine-specific DNA methyltransferases}: HI0513 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[L] COG0827 Adenine-specific DNA methyltransferases}: MJ1327a=MJ1328 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417, {[L] COG0827 Adenine-specific DNA methyltransferases}: BBK02 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647, {[L] COG0827 Adenine-specific DNA methyltransferases}: MP044=MP048=MP047 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733, {[L] COG0827 Adenine-specific DNA methyltransferases}: Rv3263 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618, {[L] COG0827 Adenine-specific DNA methyltransferases}: HP0478=HP0910=HP0054_2 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[H] COG0132 Dethiobiotin synthetase}: BS_bioD, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[H] COG0132 Dethiobiotin synthetase}: slr0523, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[H] COG0132 Dethiobiotin synthetase}: bioD=ec1787877, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[H] COG0132 Dethiobiotin synthetase}: HI1550=HI1445, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[H] COG0132 Dethiobiotin synthetase}: MJ1299 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[H] COG0132 Dethiobiotin synthetase}: CPn1042, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[H] COG0132 Dethiobiotin synthetase}: Rv1570, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[H] COG0132 Dethiobiotin synthetase}: HP0029, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0600 Uncharacterized permeases}: AF0086=AF0639 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: BS_recR, {[R] COG0600 Uncharacterized permeases}: BS_ytlD=BS_ygaM -Mycolic Acid |Synechocystis |C |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: slr1426, {[R] COG0600 Uncharacterized permeases}: sll1081=sll1451=slr0041 -Mycolic Acid |Escherichia coli |E |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: recR, {[R] COG0600 Uncharacterized permeases}: tauC=ycbM -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0600 Uncharacterized permeases}: MG078 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: HI0443, {[R] COG0600 Uncharacterized permeases}: HI0355 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: CT240, {[R] COG0600 Uncharacterized permeases}: CT854_1 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0600 Uncharacterized permeases}: PH1818 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: TP1004 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0600 Uncharacterized permeases}: MJ0413 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: CPn0299, {[R] COG0600 Uncharacterized permeases}: CPn1012_1 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0600 Uncharacterized permeases}: BB0746 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0600 Uncharacterized permeases}: MP616 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: Rv3715c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: HP0925 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0600 Uncharacterized permeases}: TM0203=TM0485 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[L] COG0353 Recombinational DNA repair protein}: RP438 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[T] COG1569 PIN domain}: AF0296 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613, {[T] COG1569 PIN domain}: slr1327=sll1912 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[T] COG1569 PIN domain}: PH0469=PH0146 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[T] COG1569 PIN domain}: MJ1680 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[E] COG0410 High-affinity branched amino acid transport system ATPase#[E] COG0411 High-affinity branched amino acid transport system ATPase#[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components#[E] COG0683 Periplasmic leucine/isoleucine/valine-binding protein}: AF0822=AF0958=AF1389=AF0221#AF0222=AF0823=AF1390=AF0959#AF0224=AF0225=AF0824=AF0 825=AF1392=AF1393=AF0960#AF0223=AF0827=AF0962=AF1391 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815, {[E] COG0410 High-affinity branched amino acid transport system ATPase#[E] COG0411 High-affinity branched amino acid transport system ATPase#[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components#[E] COG0683 Periplasmic leucine/isoleucine/valine-binding protein}: slr1881=sll0374#sll0764=slr0467#sll0146=ssl3127=slr0949=slr1200=slr1201#slr0559= slr0447 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[E] COG0410 High-affinity branched amino acid transport system ATPase#[E] COG0411 High-affinity branched amino acid transport system ATPase#[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components#[E] COG0683 Periplasmic leucine/isoleucine/valine-binding protein}: livF#livG#livM=livH#livK=livJ -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[E] COG0410 High-affinity branched amino acid transport system ATPase#[E] COG0411 High-affinity branched amino acid transport system ATPase#[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components#[E] COG0683 Periplasmic leucine/isoleucine/valine-binding protein}: MJ1268#MJ1267#MJ1269=MJ1270#MJ1266 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[E] COG0410 High-affinity branched amino acid transport system ATPase#[E] COG0411 High-affinity branched amino acid transport system ATPase#[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components#[E] COG0683 Periplasmic leucine/isoleucine/valine-binding protein}: TM1139#TM1138#TM1136=TM1137#TM1135 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[C] COG0852 NADH-ubiquinone oxidoreductase 27 kD subunit, NuoC/NQO5/Nad9}: AF1829_2 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BS_pgi -Mycolic Acid |Synechocystis |C |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: slr1349, {[C] COG0852 NADH-ubiquinone oxidoreductase 27 kD subunit, NuoC/NQO5/Nad9}: slr1281 -Mycolic Acid |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[C] COG0852 NADH-ubiquinone oxidoreductase 27 kD subunit, NuoC/NQO5/Nad9}: nuoD_1=hyfG_1=hycE_1 -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MG111 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HI1576 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CT378 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[C] COG0852 NADH-ubiquinone oxidoreductase 27 kD subunit, NuoC/NQO5/Nad9}: PH1435=PH1448 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TP0475 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MJ1605 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: CPn1025 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: BB0730 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: MP583 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: Rv0946c, {[C] COG0852 NADH-ubiquinone oxidoreductase 27 kD subunit, NuoC/NQO5/Nad9}: Rv0087_1=Rv3147 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: HP1166, {[C] COG0852 NADH-ubiquinone oxidoreductase 27 kD subunit, NuoC/NQO5/Nad9}: HP1262 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: TM1385, {[C] COG0852 NADH-ubiquinone oxidoreductase 27 kD subunit, NuoC/NQO5/Nad9}: TM1215 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[C] COG0852 NADH-ubiquinone oxidoreductase 27 kD subunit, NuoC/NQO5/Nad9}: RP355 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[F] COG0213 Thymidine phosphorylase}: AF1341=AF1342 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa, {[F] COG0213 Thymidine phosphorylase}: BS_pdp -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[F] COG0213 Thymidine phosphorylase}: deoA -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359, {[F] COG0213 Thymidine phosphorylase}: MG051 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[F] COG0213 Thymidine phosphorylase}: PH1598 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[F] COG0213 Thymidine phosphorylase}: MJ0667 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306, {[F] COG0213 Thymidine phosphorylase}: MP090 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c, {[F] COG0213 Thymidine phosphorylase}: Rv3314c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[F] COG0213 Thymidine phosphorylase}: TM1653 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[E] COG0146 N-methylhydaintoinase B}: slr0697_2, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[E] COG0146 N-methylhydaintoinase B}: MJ0963 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[E] COG0146 N-methylhydaintoinase B}: Rv0266c_2, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[E] COG0146 N-methylhydaintoinase B}: HP0696, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595, {[S] COG1704 Uncharacterized ACR, LemA family}: TP0571 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1704 Uncharacterized ACR, LemA family}: MJ1576 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479, {[S] COG1704 Uncharacterized ACR, LemA family}: TM0961 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0218 Predicted GTPases}: AF1326 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[R] COG0218 Predicted GTPases}: BS_ysxC, {[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: BS_cmk#BS_ydiC -Mycolic Acid |Synechocystis |C |oneneeded |{[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: sll1249_2#sll1063 -Mycolic Acid |Escherichia coli |E |oneneeded |{[R] COG0218 Predicted GTPases}: yihA, {[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: cmk#yeaZ -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[R] COG0218 Predicted GTPases}: MG335, {[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: MG330#MG208 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[R] COG0218 Predicted GTPases}: HI1118, {[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: HI1219=HIN1040#HI0388 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: CT452#CT343 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0218 Predicted GTPases}: PH0200 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: TP0279_1#TP0876 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0218 Predicted GTPases}: MJ0320 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: CPn0568#CPn0030 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: BB0128#BB0185 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[R] COG0218 Predicted GTPases}: MP359, {[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: MP364#MP545 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: Rv1712#Rv3421c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[R] COG0218 Predicted GTPases}: HP1567 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[R] COG0218 Predicted GTPases}: TM1466, {[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: TM1443#TM0874 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[R] COG0218 Predicted GTPases}: RP102, {[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: RP522#RP551 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[T] COG0478 Predicted serine/threonine protein kinases#[R] COG1341 Predicted GTPase or GTP-binding protein#[J] COG1374 Protein involved in ribosomal biogenesis, contains PUA domain#[R] COG1568 Predicted methyltransferases#[S] COG1590 Uncharacterized ACR#[R] COG1645 Uncharacterized Zn-finger containing protein#[S] COG1650 Uncharacterized ArCR#[N] COG1681 Archaeal flagellins#[K] COG1709 Predicted transcriptional regulators#[R] COG1750 Archaeal serine proteases#[S] COG1753 Uncharacterized ACR#[S] COG1756 Uncharacterized ACR, Mra1/C2f family#[S] COG1772 Uncharacterized ArCR#[R] COG1800 Predicted transglutaminase-like proteases#[S] COG1857 Uncharacterized ArCR#[S] COG1865 Uncharacterized ACR#[S] COG1885 Uncharacterized ArCR#[S] COG1901 Uncharacterized ACR#[R] COG1913 Predicted Zn-dependent proteases#[S] COG1935 Uncharacterized ACR#[S] COG1955 Uncharacterized family of membrane proteins#[S] COG2028 Uncharacterized ACR#[R] COG2100 MoaA-related oxidoreductases I#[R] COG2108 Uncharacterized ArCR related to pyruvate formate-lyase activating enzyme#[T] COG2112 Predicted Ser/Thr protein kinase#[L] COG2178 Translin (RNA-binding protein, recombination hotspot binding in eukaryotes)#[S] COG2237 Predicted membrane protein#[R] COG2248 Predicted metal-dependent hydrolases#[S] COG2254 Uncharacterized ACR}: AF2426#AF2049#AF0058#AF1611#AF2059#AF2370#AF0625#AF1054=AF1055#AF2414#AF0705#AF1 997=AF1481=AF1689=AF1478#AF0734#AF0407#AF0384#AF1871=AF0068#AF1400#AF0282#AF1056 #AF0330#AF1250#AF1048#AF2351#AF1810#AF1217#AF0418#AF2260#AF2058#AF0504#AF1875 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[T] COG0478 Predicted serine/threonine protein kinases#[R] COG1341 Predicted GTPase or GTP-binding protein#[J] COG1374 Protein involved in ribosomal biogenesis, contains PUA domain#[R] COG1568 Predicted methyltransferases#[S] COG1590 Uncharacterized ACR#[R] COG1645 Uncharacterized Zn-finger containing protein#[S] COG1650 Uncharacterized ArCR#[N] COG1681 Archaeal flagellins#[K] COG1709 Predicted transcriptional regulators#[R] COG1750 Archaeal serine proteases#[S] COG1753 Uncharacterized ACR#[S] COG1756 Uncharacterized ACR, Mra1/C2f family#[S] COG1772 Uncharacterized ArCR#[R] COG1800 Predicted transglutaminase-like proteases#[S] COG1857 Uncharacterized ArCR#[S] COG1865 Uncharacterized ACR#[S] COG1885 Uncharacterized ArCR#[S] COG1901 Uncharacterized ACR#[R] COG1913 Predicted Zn-dependent proteases#[S] COG1935 Uncharacterized ACR#[S] COG1955 Uncharacterized family of membrane proteins#[S] COG2028 Uncharacterized ACR#[R] COG2100 MoaA-related oxidoreductases I#[R] COG2108 Uncharacterized ArCR related to pyruvate formate-lyase activating enzyme#[T] COG2112 Predicted Ser/Thr protein kinase#[L] COG2178 Translin (RNA-binding protein, recombination hotspot binding in eukaryotes)#[S] COG2237 Predicted membrane protein#[R] COG2248 Predicted metal-dependent hydrolases#[S] COG2254 Uncharacterized ACR}: PH0512#PH0197#PH0281#PH0728#PH1069=PH1887#PH0795#PH0006#PH0546=PH0548=PH0549=PH0 550=PH0551#PH1471#PH1442#PHs031#PH1379#PH0591#PH0672=PH1321#PH0920#PH0814#PH1312 #PH1401#PH1820=PH1784#PH0127#PH0559#PH0907#PH1615#PH1164#PH1307#PH0663#PH1903#PH 1002#PH0916 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[T] COG0478 Predicted serine/threonine protein kinases#[R] COG1341 Predicted GTPase or GTP-binding protein#[J] COG1374 Protein involved in ribosomal biogenesis, contains PUA domain#[R] COG1568 Predicted methyltransferases#[S] COG1590 Uncharacterized ACR#[R] COG1645 Uncharacterized Zn-finger containing protein#[S] COG1650 Uncharacterized ArCR#[N] COG1681 Archaeal flagellins#[K] COG1709 Predicted transcriptional regulators#[R] COG1750 Archaeal serine proteases#[S] COG1753 Uncharacterized ACR#[S] COG1756 Uncharacterized ACR, Mra1/C2f family#[S] COG1772 Uncharacterized ArCR#[R] COG1800 Predicted transglutaminase-like proteases#[S] COG1857 Uncharacterized ArCR#[S] COG1865 Uncharacterized ACR#[S] COG1885 Uncharacterized ArCR#[S] COG1901 Uncharacterized ACR#[R] COG1913 Predicted Zn-dependent proteases#[S] COG1935 Uncharacterized ACR#[S] COG1955 Uncharacterized family of membrane proteins#[S] COG2028 Uncharacterized ACR#[R] COG2100 MoaA-related oxidoreductases I#[R] COG2108 Uncharacterized ArCR related to pyruvate formate-lyase activating enzyme#[T] COG2112 Predicted Ser/Thr protein kinase#[L] COG2178 Translin (RNA-binding protein, recombination hotspot binding in eukaryotes)#[S] COG2237 Predicted membrane protein#[R] COG2248 Predicted metal-dependent hydrolases#[S] COG2254 Uncharacterized ACR}: MJ1073#MJ1315#MJ1410#MJ1273=MJ0675#MJ1510#MJ0890#MJ0166#MJ0891=MJ0892=MJ0893#MJ1 545#MJ1318#MJ1122#MJ0557#MJ0224#MJ1282=MJECS12m=MJECL39#MJ0381#MJ1613#MJ0068#MJ1 640#MJ0281#MJ0105#MJ0901#MJECS03#MJ0103#MJ0021#MJ1211#MJ0175#MJ1032#MJ1629#MJ038 4 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[M] COG2089 Sialic acid synthase}: BS_spsE -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595, {[M] COG2089 Sialic acid synthase}: TP0562 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[M] COG2089 Sialic acid synthase}: MJ1065 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618, {[M] COG2089 Sialic acid synthase}: HP0178 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: AF0411#AF0676, {[S] COG1557 Predicted membrane protein#[P] COG1910 Periplasmic molybdate-binding protein (domain)}: AF1312=AF1927#AF0931_2 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BS_cysS#BS_adk, {[S] COG1557 Predicted membrane protein#[P] COG1910 Periplasmic molybdate-binding protein (domain)}: BS_ydcC#BS_yvgK -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: slr0958#sll1059=sll1815 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MG253#MG171 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HI0078#HI0349 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CT782#CT128 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: PH0636#PH1117 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TP0091#TP0595 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1557 Predicted membrane protein#[P] COG1910 Periplasmic molybdate-binding protein (domain)}: MJ0687#MJ0886_2 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: CPn0932#CPn0244 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: BB0599#BB0417 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: MP481#MP647 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: Rv2130c=Rv3580c#Rv0733 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: HP0886#HP0618 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: TM0719#TM1479 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: RP085#RP638 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[S] COG1912 Uncharacterized ACR}: AF0461 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BS_aspS#BS_folD#BS_spoVC#BS_rplQ#BS_rpmA#BS_prfA#BS_yeeI=BS_yrbC#BS_rplL#BS_fmt# BS_rpmB#BS_rpsP#BS_rpmH#BS_frr#BS_groES#BS_acpA=BS_dltC=BS_pksDa=BS_pksM_6#BS_yt aG#BS_rpsR#BS_def=BS_ykrB#BS_rpmE=BS_ytiA#BS_rpmJ#BS_rplU#BS_tsf#BS_rpmG=BS_yqgN a#BS_rpsT#BS_yerG#BS_ylxA#BS_infC#BS_rpmI#BS_rplT#BS_dnaC=BS_yorI#BS_yabC#BS_yqf G#BS_rplS#BS_trmD#BS_rplI#BS_rpsF#BS_ftsH=BS_yjoB#BS_lepA#BS_obg#BS_tig#BS_yhcT= BS_yjbO=BS_ylyB#BS_sigA=BS_sigE=BS_spoIIIC=BS_spoIVCB#BS_rncS#BS_dnaE=BS_yorL#BS _dnaA#BS_rnpA#BS_lsp#BS_ssb=BS_ywpH#BS_ruvA#BS_secA#BS_lgt#BS_secE#BS_yvaI#BS_sp oIIIJ=BS_yqjG#BS_hbs=BS_yonN#BS_rbfA#BS_yphC#BS_ruvBa -Mycolic Acid |Synechocystis |C |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: slr1720#sll0753#slr0922#sll1819#ssr2799#sll1110#slr0989#sll1746=ssl0438#slr0070# ssr1604#ssr0482#smr0011#sll0145#slr2075#ssl2084#slr0553#ssr1399#slr1549#ssl3445# sml0006#slr1678#sll1261#ssr1398#ssl2233#sll1209#sll1144#slr0974#ssl1426#sll0767# slr0833_1=slr0833_3#sll0818#slr0053#sll1740#sll1198#sll1244#sll1767#slr1390=slr0 228=sll1463=slr1604#slr0604#slr1090#sll0533#slr1592=slr1629#slr0653=sll0306=sll0 184=sll1689=sll2012#slr0346=slr1646#slr0603=sll1572#sll0848#slr1469#slr1366#slr0 925=slr1034#sll0876#sll0616#sll1187#ssl3335#slr1639#slr1471#sll1712#sll0754#slr1 974#sll0613 -Mycolic Acid |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MG036#MG013#MG083#MG178#MG234#MG258#MG332#MG362#MG365#MG426#MG446#MG466#MG435#MG 393#MG287#MG264#MG092#MG106#MG257#MG174#MG232#MG433#MG325#MG363.1#MG254#MG222#MG 196#MG197#MG198#MG094#MG056#MG388#MG444#MG445#MG093#MG090#MG457#MG138#MG384#MG23 8#MG209=MG370#MG249#MG367#MG261#MG469#MG465#MG210#MG091#MG358#MG072#MG086#MG055# MG059#MG464#MG353#MG143#MG329#MG359 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HI0317#HI0609#HI0394#HI0803#HI0879#HI1561#HI0315#HI0641#HI0623#HI0951#HI0204#HI0 998#HI0808#HI0542#HI0154#HIN0307#HI0545#HI0622#HI0758#HI0798.1#HI0880#HI0914#HI0 950#HI0965#HI1100#HI1130#HIN0723#HIN0724#HI1320#HI1574#HI1654#HI0004#HI0201#HI02 02#HI0544#HI0547#HI1335=HI1465#HI0016#HI0877#HI0713#HI0176=HI0412=HI0042=HI0617= HI1435#HI0533=HI0269#HI0014#HI0739#HI0993=HI1225.1#HI0999#HI1006#HI0250#HI0313#H I0909#HI0904#HI0716#HI0981#HI1001#HI1221=HI1313=HI0430#HI1288#HI0136#HI0312 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CT542#CT078#CT800#CT506#CT419#CT023#CT457#CT316#CT530#CT086#CT026#CT785#CT677#CT 111#CT236#CT492#CT802#CT353#CT022#CT786#CT420#CT679#CT150#CT617#CT146#CT272#CT83 3#CT834#CT835#CT497#CT048#CT422#CT028#CT027_1#CT803#CT801#CT841_2#CT064#CT418#CT 707#CT658=CT106#CT615#CT297#CT545#CT250=CT275#CT784#CT408#CT044#CT501#CT701#CT25 2#CT321#CT076#CT251#CT267#CT095#CT703#CT040 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[S] COG1912 Uncharacterized ACR}: PH0463 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TP0985#TP0732#TP1011#TP0213#TP0743#TP0051#TP0474#TP0240#TP0756#TP0362#TP0905#TP0 951#TP0604#TP1013#TP0808#TP0296#TP0061#TP0757#TP0255#TP0209#TP0745#TP0605#TP0234 #TP_rpsT#TP0634#TP0384#TP0850#TP0849#TP0848#TP0058#TP0975#TP0650#TP0909#TP0908#T P0060#TP0063#TP0765=TP0330#TP0510#TP0742#TP0506#TP0154=TP0231=TP0339#TP1012=TP04 93#TP0809#TP0669#TP0001#TP0950#TP0978#TP0062=TP0310#TP0543#TP0379#TP0852#TP0235# TP0184#TP0949#TP0251#TP0890#TP0689#TP0162 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[S] COG1912 Uncharacterized ACR}: MJ1651 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: CPn0662#CPn0335#CPn0950#CPn0625#CPn0545#CPn0113#CPn0573#CPn0080#CPn0649#CPn0327# CPn0116#CPn0935#CPn0699#CPn0135#CPn0295#CPn0611#CPn0952#CPn1067#CPn0112#CPn0936# CPn0546#CPn0697#CPn0250#CPn0754#CPn0149#CPn0421#CPn0990#CPn0991#CPn0992#CPn0616# CPn0382#CPn0509#CPn0118#CPn0117_1#CPn0953#CPn0951#CPn0998#CPn0359#CPn0544#CPn084 8#CPn0719=CPn0403#CPn0756#CPn0054#CPn0666#CPn0309=CPn0424#CPn0934#CPn0535#CPn038 6#CPn0620#CPn0841#CPn0311#CPn0075#CPn0337#CPn0310#CPn0416#CPn0318#CPn0844#CPn039 0 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: BB0446#BB0026#BB0787#BB0503#BB0780#BB0196#BB0025#BB0390#BB0064#BB0350#BB0695#BB0 440#BB0121#BB0741#BB0704#BB0547#BB0113#BB0065#BB0229#BB0499#BB0778#BB0122#BB0396 #BB0233#BB0552#BB0306#BB0190#BB0189#BB0188#BBG32=BB0111#BB0427#BB0060#BB0699#BB0 698#BB0112#BB0115#BB0789#BB0088#BB0781#BB0610#BB0018=BB0815#BB0712=BB0771#BB0705 #BB0579#BB0437#BB0441#BB0469#BB0114#BB0023#BB0154#BB0362#BB0395#BB0033#BB0442#BB 0232#BB0802#BB0508#BB0022 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: MP108#MP137#MP611#MP640#MP510#MP476#MP362#MP303#MP299#MP218#MP182#MP160#MP206#MP 268#MP433#MP456#MP602#MP588#MP477#MP644#MP512#MP211#MP369#MP301#MP480#MP522#MP04 0#MP039#MP038#MP600#MP084#MP273#MP184#MP183#MP601#MP604#MP171#MP557#MP279#MP506# MP544=MP294#MP485#MP297#MP460#MP156#MP161#MP543#MP603#MP307#MP622#MP608#MP086#MP 081#MP162#MP312#MP676#MP365#MP306 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: Rv2572c#Rv3356c#Rv1014c#Rv3456c#Rv2441c#Rv1299#Rv2603c#Rv0652#Rv1406=Rv3404c#Rv0 105c=Rv2058c#Rv2909c#Rv3924c#Rv2882c#Rv3418c#Rv0033=Rv1344=Rv2244#Rv1631_1#Rv005 5=Rv2055c#Rv0429c#Rv1298#Rv3461c#Rv2442c#Rv2889c#Rv2057c#Rv2412#Rv3014c#Rv2165c# Rv1641#Rv1642#Rv1643#Rv0058_1=Rv0058_3#Rv1003#Rv2367c#Rv2904c#Rv2906c#Rv0056#Rv0 053#Rv3610c#Rv2404c#Rv2440c#Rv2462c#Rv1540=Rv3300c#Rv2703=Rv2710#Rv2925c#Rv1547= Rv3370c#Rv0001#Rv3923c#Rv1539#Rv0054=Rv2478c#Rv2593c#Rv1821=Rv3240c#Rv1614#Rv063 8#Rv3100c#Rv3921c#Rv2986c#Rv2838c#Rv1713#Rv2592c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: HP0617#HP0577#HP1497#HP1292#HP0297#HP0077#HP0162#HP1199#HP1141#HP0491#HP1151#HP1 447#HP1256#HP0011#HP0559=HP0962#HP0831#HP1244#HP0793#HP0551#HP1297#HP0296#HP1555 #HP1204#HP0076#HP0615#HP0707#HP0124#HP0125#HP0126#HP1362#HP0552#HP1160#HP1147#HP 1148#HP0514#HP1246#HP1069=HP0286#HP0355#HP0303#HP0795#HP0745=HP0347=HP0956#HP008 8#HP0662#HP1460#HP1529#HP1448#HP0074#HP1245#HP0883#HP0786#HP0955#HP_secE#HP1444# HP1450#HP0835#HP1047#HP0834#HP1059, {[S] COG1912 Uncharacterized ACR}: HP0709 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: TM1441#TM1767#TM1626#TM1471#TM1456#TM1363#TM0466#TM0457#TM0528#TM0255#TM1566#TM_ rpmH#TM1399#TM0505#TM0662=TM0175#TM1387#TM0605#TM1661#TM1684#TM1476#TM1458#TM160 5#TM0451#TM1657#TM0100#TM0872#TM1590#TM1591#TM1592#TM1736#TM0709#TM1509#TM1571#T M1569#TM0863#TM0603#TM0580#TM1623#TM0098#TM0694#TM0462=TM0940#TM1451#TM1102#TM04 61#TM0926#TM1463#TM0463#TM0604#TM0165#TM1578#TM0158#TM0452#TM0254#TM1461#TM0266# TM0855#TM1446#TM1730, {[S] COG1912 Uncharacterized ACR}: TM0660 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: RP145#RP515#RP605#RP634#RP752#RP529#RP455#RP139#RP209#RP099#RP878#RP610#RP154#RP 627#RP763#RP731#RP040#RP208#RP100#RP456#RP751#RP087#RP879#RP633#RP720#RP569#RP53 1#RP608#RP609#RP542#RP747#RP741#RP112#RP111#RP041#RP039#RP043#RP275#RP843#RP842# RP846=RP258#RP303=RP858#RP117#RP778#RP601=RP631#RP611#RP408#RP836#RP385#RP575#RP 046#RP134#RP430#RP048#RP708=RP524=RP171#RP435#RP677#RP386 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: AF0430=AF1401 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: BS_fhuC=BS_yusV=BS_yvrA=BS_yfmF=BS_yclP, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: BS_dacF=BS_dacB=BS_dacA -Mycolic Acid |Synechocystis |C |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: slr1318 -Mycolic Acid |Escherichia coli |E |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: fepC=fecE=fhuC=btuD, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: dacC=yeeC=dacA=pbpG -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: MG290 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: HI1470=HI1272, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: HI0029=HI0364 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: CT551 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: PH1235=PH0791 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: TP0800 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: MJ0873=MJ0089 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: CPn0672 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: BB0605 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: MP423 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: Rv3330=Rv2911 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: HP0888 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: TM0078=TM0191 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: RP389 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: AF2029_2#AF1558 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: BS_yloD#BS_yrrK, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BS_ytqI=BS_yybT_2#BS_smc -Mycolic Acid |Synechocystis |C |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: slr1123#sll1547, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: sll1253_1=sll0639#sll1120 -Mycolic Acid |Escherichia coli |E |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: gmk=phnN#yqgF -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: MG107#MG291.1, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MG190=MG371#MG298 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: HI1743#HI0305 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: CT030#CT184 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: PH0279_2=PH0534#PH1798 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TP0436=TP0803#TP0367 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MJ1633_2=MJ0988#MJ1643 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: CPn0120#CPn0237 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: BB0619#BB0045 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: MP587#MP421a, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: MP015=MP293#MP414 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: Rv1389#Rv2554c, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: Rv2837c#Rv2922c -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: HP0321#HP0334 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: TM1689#TM1545, {[R] COG0618 Exopolyphosphatase-related proteins#[D] COG1196 Chromosome segregation ATPases}: TM1595=TM0715_1#TM1182 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: RP765#RP330 -Mycolic Acid |Archaeoglobus fulgidus |A |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: AF0430=AF1401 -Mycolic Acid |Bacillus subtilis |B |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: BS_fhuC=BS_yusV=BS_yvrA=BS_yfmF=BS_yclP, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: BS_ydbH=BS_gltT=BS_gltP -Mycolic Acid |Synechocystis |C |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: slr1318 -Mycolic Acid |Escherichia coli |E |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: fepC=fecE=fhuC=btuD, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -Mycolic Acid |Mycoplasma genitalium |G |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: MG290 -Mycolic Acid |Haemophilus influenzae |H |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: HI1470=HI1272, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: HI1545 -Mycolic Acid |Chlamydia trachomatis |I |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: CT401=CT230 -Mycolic Acid |Pyrococcus horikoshii |K |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: PH1235=PH0791, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: PH1295 -Mycolic Acid |Treponema pallidum |L |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: TP0555=TP0934 -Mycolic Acid |Methanococcus jannaschii |M |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: MJ0873=MJ0089 -Mycolic Acid |Chlamydia pneumoniae |N |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: CPn0528=CPn0289 -Mycolic Acid |Borrelia burgdorferi |O |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: BB0401 -Mycolic Acid |Mycoplasma pneumoniae |P |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: MP423 -Mycolic Acid |Mycobacterium tuberculosis |R |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: Rv2443 -Mycolic Acid |Helicobacter pylori |U |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: HP0888 -Mycolic Acid |Thermotoga maritima |V |oneneeded |{[P] COG1120 ABC-type iron (III) transport system, ATPase component}: TM0078=TM0191 -Mycolic Acid |Rickettsia prowazekii |X |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: RP176 +Aerobic |Escherichia coli |E |allneeded |{[L] COG0164 Ribonuclease HII}: rnhB, {[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI +Aerobic |Escherichia coli |E |allneeded |{[R] COG0665 Predicted oxidoreductases}: dadA=ordL, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ +Aerobic |Escherichia coli |E |allneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: ycfB#ybaB, {[R] COG0546 Predicted phosphatases}: yniC=yhfE +Aerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: nagB=yieK=yraG#zwf#pfs=amn +Aerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[S] COG0658 Uncharacterized BCR, ComEC family}: ycaI_1 +Aerobic |Escherichia coli |E |allneeded |{[R] COG0546 Predicted phosphatases}: yniC=yhfE, {[R] COG0612 Predicted Zn-dependent peptidases}: yhjJ=yddC +Aerobic |Escherichia coli |E |allneeded |{[R] COG0517 CBS domains}: guaB_2=yrbH_2=gutQ_2=ygeV_1=ygiT, {[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI +Aerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[EP] COG1173 Dipeptide/oligopeptide/nickel ABC-type transport systems, permease components}: dppC=oppC=nikC=sapC=yejE=ec1787054=ec1787760 +Aerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[S] COG0759 Uncharacterized ACR, YidD family}: yidD +Aerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[G] COG0191 Fructose/tagatose biphosphate aldolases#[H] COG0192 S-adenosylmethionine synthetase}: gatY=ec1788072=fba=yraC#metK +Aerobic |Escherichia coli |E |allneeded |{[G] COG0191 Fructose/tagatose biphosphate aldolases#[H] COG0192 S-adenosylmethionine synthetase}: gatY=ec1788072=fba=yraC#metK, {[P] COG0607 Rhodanese-related sulfurtransferases}: pspE=yibN=ec1788054=ybbB=ygaP=sseA=glpE +Aerobic |Escherichia coli |E |allneeded |{[G] COG0191 Fructose/tagatose biphosphate aldolases#[H] COG0192 S-adenosylmethionine synthetase}: gatY=ec1788072=fba=yraC#metK, {[P] COG0605 Superoxide dismutase}: sodA=sodB +Aerobic |Escherichia coli |E |allneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: ackA=yhaA#gidB#era, {[R] COG0665 Predicted oxidoreductases}: dadA=ordL +Aerobic |Escherichia coli |E |allneeded |{[G] COG0191 Fructose/tagatose biphosphate aldolases#[H] COG0192 S-adenosylmethionine synthetase}: gatY=ec1788072=fba=yraC#metK, {[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III}: fabH +Aerobic |Escherichia coli |E |allneeded |{[G] COG0191 Fructose/tagatose biphosphate aldolases#[H] COG0192 S-adenosylmethionine synthetase}: gatY=ec1788072=fba=yraC#metK, {[R] COG0665 Predicted oxidoreductases}: dadA=ordL +Aerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[MG] COG0451 Nucleoside-diphosphate-sugar epimerases}: yefB=rfaD=ec1787093=ec1788589_2=ec1788327 +Aerobic |Escherichia coli |E |allneeded |{[FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases}: ycfF, {[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI +Aerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[EP] COG0601 Dipeptide/oligopeptide/nickel permeases}: yejB=dppB=sapB=nikB=ec1787053=ec1787761=oppB +Aerobic |Escherichia coli |E |allneeded |{[F] COG0105 Nucleoside diphosphate kinase}: ndk, {[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases}: spoT=relA +Aerobic |Escherichia coli |E |allneeded |{[G] COG0191 Fructose/tagatose biphosphate aldolases#[H] COG0192 S-adenosylmethionine synthetase}: gatY=ec1788072=fba=yraC#metK, {[P] COG0475 K efflux system, membrane domain}: ybaL_1=kefB_1=kefC_1 +Aerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[H] COG0452 Flavoprotein involved in panthothenate metabolism}: dfp +Aerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[F] COG0518 GMP synthase - Glutamine amidotransferase domain#[F] COG0519 GMP synthase - PP-ATPase domain}: guaA_1#guaA_2 +Aerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: ygdN=amiB=amiA +Aerobic |Escherichia coli |E |allneeded |{[GER] COG0477 Permeases}: ycaD=proP=ygcS=mhpT=xylE=araE=galP, {[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI +Aerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[P] COG0735 Ferric uptake regulation protein}: fur=yjbK +Aerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[F] COG0516 IMP dehydrogenase/GMP reductase}: guaB_1=guaB_3=guaC +Aerobic |Escherichia coli |E |allneeded |{[M] COG0438 Glycosyltransferases I}: rfaG=wcaL=yefI=rfaB=yefD=wcaC, {[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI +Aerobic |Escherichia coli |E |allneeded |{[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases}: spoT=relA, {[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX +Aerobic |Escherichia coli |E |allneeded |{[LKJ] COG0513 Superfamily II DNA and RNA helicases}: srmB=rhlB=dbpA=deaD=rhlE=yfjK, {[S] COG0759 Uncharacterized ACR, YidD family}: yidD +Aerobic |Escherichia coli |E |allneeded |{[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases}: spoT=relA, {[L] COG0708 Exonuclease III}: xthA +Aerobic |Escherichia coli |E |allneeded |{[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases}: spoT=relA, {[R] COG0546 Predicted phosphatases}: yniC=yhfE +Aerobic |Escherichia coli |E |allneeded |{[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI, {[T] COG0642 Sensory transduction histidine kinases}: baeS=basS=cpxA=creC=envZ=glnL=hydH +Aerobic |Escherichia coli |E |allneeded |{[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases}: spoT=relA, {[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: ybiT=uup=yjjK=yheS +Aerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[H] COG0669 Phosphopantetheine adenylyltransferase#[N] COG0758 Protein involved in DNA uptake}: kdtB#smf +Aerobic |Escherichia coli |E |allneeded |{[M] COG0463 Glycosyltransferases involved in cell wall biogenesis}: ec1788588=ec1788692=yaiP=yibD=wcaA=wcaE, {[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI +Aerobic |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU, {[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[R] COG1279 Conserved membrane proteins, similar to lysine exporter}: yggA +Aerobic |Escherichia coli |E |oneneeded |{[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[E] COG0833 Amino acid transporters}: ykfD=lysP +Aerobic |Escherichia coli |E |oneneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[G] COG0033 Phosphoglucomutase#[L] COG1403 McrA and related restriction endonucleases#[P] COG1613 Periplasmic sulfate/thiosulfate binding proteins#[S] COG1741 Uncharacterized BCR, YhhW family#[P] COG2060 K+-transporting ATPase, A chain#[H] COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase CobU/CobP#[G] COG2133 Glucose dehydrogenase#[S] COG2149 Predicted membrane protein#[R] COG2153 Predicted acyltransferases#[P] COG2156 K+-transporting ATPase, c chain#[S] COG2161 Uncharacterized ACR#[S] COG2170 Uncharacterized BCR#[M] COG2173 D-alanyl-D-alanine dipeptidase#[P] COG2193 Bacterioferritin (cytochrome b1)#[T] COG2205 Osmosensitive K+ channel His kinase sensor domain#[P] COG2216 High-affinity potassium transport system, ATPase chain B}: pgm#mcrA#sbp=cysP#yhhW=yhaK#kdpA#cobU#yliI#yidH#elaA#kdpC#yefM#ybdK#ec1787763#bf r#kdpD_1#kdpB, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[F] COG0418 Dihydroorotase#[G] COG0837 Glucokinase#[D] COG0851 Bacterial cell division topological specificity factor MinE#[H] COG0854 Pyridoxal phosphate biosynthesis protein PdxJ#[C] COG1049 Aconitase B#[E] COG1166 Arginine decarboxylase (spermidine biosynthesis)#[H] COG1995 Pyridoxin biosynthesis protein of unknown function}: pyrC#glk#minE#pdxJ#acnB#speA#pdxA, {[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[G] COG0738 Fucose permease#[P] COG0753 Catalase#[H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1#[F] COG1972 Nucleoside permease#[R] COG2249 Putative NADPH-quinone reductase, YabF family (modulator of drug activity B)}: fucP#katE#ygdL#yeiJ=yeiM=nupC#mdaB=yabF=ycaK=yheR +Aerobic |Escherichia coli |E |oneneeded |{[H] COG1072 Panthothenate kinase#[E] COG1168 PLP-dependent aminotransferases, MalY/PatB family#[S] COG1660 Uncharacterized BCR, YhbJ/UPF0042 family#[S] COG1666 Uncharacterized BCR, YajQ family#[R] COG2132 Putative multicopper oxidases#[D] COG2177 Cell division protein FtsX#[K] COG2186 Transcriptional regulators, FadR family#[S] COG2258 Uncharacterized BCR, YiiM family#[S] COG2259 Predicted membrane protein}: coaA=yggC#malY#yhbJ#yajQ#yacK=sufI#ftsX#exuR=uxuR=yhcK=lldR=fadR=glcC=pdhR#yiiM# yqjF=yphA, {[O] COG2214 Molecular chaperones, DnaJ class, CbpA family}: cbpA +Aerobic |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU +Aerobic |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY +Aerobic |Escherichia coli |E |oneneeded |{[O] COG2214 Molecular chaperones, DnaJ class, CbpA family}: cbpA +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[E] COG0405 Gamma-glutamyltranspeptidase#[E] COG0506 Proline dehydrogenase#[R] COG0523 Putative GTPases (G3E family)#[R] COG0699 Predicted GTPases (dynamin-related)#[R] COG1064 Zn-dependent alcohol dehydrogenases}: ggt#putA_1#yeiR=yjiA#yjdA_1#yahK=yjgB=adhP, {[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU, {[O] COG2214 Molecular chaperones, DnaJ class, CbpA family}: cbpA +Aerobic |Escherichia coli |E |oneneeded |{[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG +Aerobic |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU, {[S] COG1288 Uncharacterized membrane protein#[R] COG1823 Predicted Na+-dicarboxylate symporter#[E] COG2195 Di- and tripeptidases}: yfcC#ec1788024#pepD=pepT +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[E] COG1760 L-serine deaminase#[T] COG1966 Carbon starvation protein CstA, predicted membrane protein#[I] COG2057 Coenzyme A transferases, subunit B#[O] COG2077 Thiol peroxidase}: sdaA=yhaP=sdaB=yhaQ#cstA=yjiY#atoA=ydiF_2#tpx +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[R] COG1090 Predicted nucleoside-diphosphate sugar epimerases (SulA family)#[H] COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase#[HP] COG1169 Isochorismate synthase#[C] COG1252 NADH dehydrogenase, FAD-containing subunit#[G] COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins#[S] COG1929 Uncharacterized BCR#[M] COG1970 Large-conductance mechanosensitive channel MscL#[E] COG1982 Arginine/lysine/ornithine decarboxylases#[M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)#[H] COG2228 o-Succinylbenzoate-CoA synthase}: ec1788642#menD#menF=entC#ndh#glpX=yggF#yhaD=ybbZ#mscL#ldcC=adiA=speF=cadA=speC#d acB#menE, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[I] COG2134 CDP-diacylglycerol pyrophosphatase}: cdh +Aerobic |Escherichia coli |E |oneneeded |{[H] COG0259 Pyridoxamine phosphate oxidase#[E] COG0308 Aminopeptidase N#[I] COG1133 ABC-type long-chain fatty acid transport system, permease component}: pdxH#pepN#yddA=sbmA, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD +Aerobic |Escherichia coli |E |oneneeded |{[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG +Aerobic |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU +Aerobic |Escherichia coli |E |oneneeded |{[R] COG0384 Predicted epimerase, PhzC/PhzF homolog#[P] COG0387 Ca2+/H+ antiporter#[S] COG0398 Uncharacterized ACR, YdjX/UPF0043 family#[R] COG0412 Dienelactone hydrolase and related enzymes#[S] COG1359 Uncharacterized ACR, YneC family#[S] COG1742 Uncharacterized BCR, YnfA/UPF0060 family#[S] COG1937 Uncharacterized BCR#[F] COG2022 Uncharacterized enzyme of thiazol biosynthesis#[R] COG2040 Predicted methyltransferases}: yddE#chaA#ydjX=ydjZ#ysgA=yghX+Y#ygiN=ec1787797#ec1787865#yaiN=yohL#thiG#yagD, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG +Aerobic |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU, {[G] COG1440 Phosphotransferase system cellobiose-specific component IIB#[G] COG1447 Phosphotransferase system cellobiose-specific component IIA#[G] COG1455 Phosphotransferase system cellobiose-specific component IIC#[E] COG2113 Periplasmic binding protein of proline/glycine betaine ABC-type transport system}: celA#celC#celB#proX +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[P] COG0855 Polyphosphate kinase#[S] COG2127 Uncharacterized ACR}: ppk#yljA +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[D] COG2184 Fic protein involved in cell division}: fic +Aerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[P] COG1858 Cytochrome c peroxidase#[C] COG1969 Ni/Fe hydrogenase cytochrome b subunit}: yhjA#hyaC +Aerobic |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[P] COG0306 Phosphate permease}: pitA=pitB +Bacili |Escherichia coli |E |allneeded |{[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]#[E] COG0040 ATP phosphoribosyltransferase (histidine biosynthesis)#[E] COG0077 Prephenate dehydratase#[E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase#[E] COG0107 Imidazoleglycerol-phosphate synthase#[E] COG0118 Glutamine amidotransferase (HisH)#[E] COG0131 Imidazoleglycerol-phosphate dehydratase#[E] COG0137 Argininosuccinate synthase#[E] COG0139 Phosphoribosyl-AMP cyclohydrolase#[E] COG0141 Histidinol dehydrogenase#[E] COG0347 Nitrogen regulatory protein PII#[E] COG0440 Acetolactate synthase, small subunit}: gcl=ilvB=ilvG=ilvI=poxB=ec1788716#hisG#pheA_2#hisA#hisF#hisH#hisB_2#argG#hisI_1# hisD#glnK=glnB#ilvH=ilvN=ilvM, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[E] COG0520 Selenocysteine lyase}: ec1787970=ygdJ +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[K] COG1940 Transcriptional regulators of NagC/XylR family}: mlc=yjcT=yajF=ycfX=nagC=yhcI=yphH +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[H] COG0054 Riboflavin synthase beta-chain#[E] COG0082 Chorismate synthase#[H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase#[E] COG0128 5-enolpyruvylshikimate-3-phosphate synthase#[E] COG0169 Shikimate 5-dehydrogenase#[H] COG1985 Pyrimidine reductase, riboflavin biosynthesis}: ribE#aroC#ribB#aroA#aroE=ydiB#ribD_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[HR] COG0535 Molybdenum cofactor biosynthesis enzyme and related Fe-S oxidoreductases}: moaA +Bacili |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[C] COG0240 Glycerol 3-phosphate dehydrogenase}: gpsA +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[E] COG0133 Tryptophan synthase beta chain}: trpB=yedO, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[M] COG0438 Glycosyltransferases I}: rfaG=wcaL=yefI=rfaB=yefD=wcaC +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[G] COG0483 Inositol phosphatase family proteins}: suhB +Bacili |Escherichia coli |E |allneeded |{[F] COG0015 Adenylosuccinate lyase#[F] COG0104 Adenylosuccinate synthase#[E] COG0111 Phosphoglycerate dehydrogenase#[F] COG0151 Phosphoribosylamine-glycine ligase#[H] COG0157 Nicotinate-nucleotide pyrophosphorylase#[F] COG0167 Dihydroorotate dehydrogenase#[E] COG0460 Homoserine dehydrogenase#[E] COG0498 Threonine synthase#[G] COG0524 Sugar kinases, ribokinase family}: purB#purA#serA#purD#nadC#yeiA_1=pyrD#thrA_2=metL_2#thrC#rbsK=yhfQ=yihV=ec1788071 =ec1788417=yeiC=kdgK, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[J] COG1841 Ribosomal protein L30/L7E}: rpmD +Bacili |Escherichia coli |E |allneeded |{[F] COG0015 Adenylosuccinate lyase#[F] COG0104 Adenylosuccinate synthase#[E] COG0111 Phosphoglycerate dehydrogenase#[F] COG0151 Phosphoribosylamine-glycine ligase#[H] COG0157 Nicotinate-nucleotide pyrophosphorylase#[F] COG0167 Dihydroorotate dehydrogenase#[E] COG0460 Homoserine dehydrogenase#[E] COG0498 Threonine synthase#[G] COG0524 Sugar kinases, ribokinase family}: purB#purA#serA#purD#nadC#yeiA_1=pyrD#thrA_2=metL_2#thrC#rbsK=yhfQ=yihV=ec1788071 =ec1788417=yeiC=kdgK, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[H] COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase}: thiD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[C] COG0621 Fe-S oxidoreductases family 1}: yleA=yliG +Bacili |Bacillus subtilis |B |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: BS_upp#BS_dra, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: BS_araD=BS_ykrY, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: BS_yutL#BS_dapB#BS_sdhA +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: dapF#dapB#sdhA=frdA +Bacili |Haemophilus influenzae |H |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: HI1228#HI1116, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: HI0611=HI1012=HI1025, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: HI0750#HI1308#HI0835 +Bacili |Mycobacterium tuberculosis |R |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: Rv3309c#Rv0478, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: Rv0727c, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: Rv2726c#Rv2773c#Rv0248c=Rv1552=Rv3318=Rv3537=Rv1817 +Bacili |Methanobacterium thermoautotrophicum |T |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: MTH1114#MTH818, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: MTH1406, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: MTH1334#MTH800#MTH1502 +Bacili |Thermotoga maritima |V |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: TM0721#TM1559, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: TM1072=TM0283, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: TM1522#TM1520#TM0427 +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[P] COG0581 Phosphate permease component of ATP-dependent phosphate uptake system}: pstA=phnE +Bacili |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[LR] COG0494 NTP pyrophosphohydrolases (MutT family) including oxidative damage repair enzymes}: mutT=rdsA=yzzG=yrfE=ec1788056=ntpA=yjaD +Bacili |Escherichia coli |E |allneeded |{[E] COG0019 Diaminopimelate decarboxylase#[E] COG0059 Ketol-acid reductoisomerase (isoleucine biosynthesis)#[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase#[E] COG0134 Indole-3-glycerol phosphate synthase#[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I#[E] COG0287 Prephenate dehydrogenase#[EH] COG0512 Anthranilate/para-aminobenzoate synthases component II#[E] COG0547 Anthranilate phosphoribosyltransferase#[C] COG0778 Nitroreductase family proteins}: lysA#ilvC#ilvD=yagF=edd=yjhG#trpC_1#trpE=pabB#tyrA_2#pabA=trpD_1#trpD_2#ec178724 3=nfnB=mdaA=ydjA, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[I] COG0020 Undecaprenyl pyrophosphate synthase#[H] COG0142 Geranylgeranyl pyrophosphate synthase#[L] COG0177 Predicted EndoIII-related endonuclease#[F] COG0504 CTP synthase (UTP-ammonia lyase)#[N] COG0681 Signal peptidase I#[M] COG0750 Predicted membrane-associated Zn-dependent proteases 1}: yaeS#ispA=ispB#nth#pyrG#lepB#yaeL, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[E] COG0078 Ornithine carbamoyltransferase}: argI=argF=ygeW, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[E] COG0345 Pyrroline-5-carboxylate reductase}: proC +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[F] COG0127 Xanthosine triphosphate pyrophosphatase, HAM1/YggV family}: yggV, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[F] COG0518 GMP synthase - Glutamine amidotransferase domain#[F] COG0519 GMP synthase - PP-ATPase domain}: guaA_1#guaA_2 +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase}: ilvE=pabC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs#[R] COG0628 Predicted permease#[S] COG0668 Uncharacterized ACR, integral membrane protein, YjeP/UPF0003 family}: ybbK=hflC=hflK#perM=ec1787979=ec1787885=yhhT#aefA_2=yjeP_2=yggB=ybiO_2=ec1787591 =ybdG +Bacili |Escherichia coli |E |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[K] COG1309 Transcriptional regulators, AcrR family}: acrR=envR=ec1787938=ycdC=betI=gusR=yijC +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[MG] COG0451 Nucleoside-diphosphate-sugar epimerases}: yefB=rfaD=ec1787093=ec1788589_2=ec1788327 +Bacili |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[EP] COG0601 Dipeptide/oligopeptide/nickel permeases}: yejB=dppB=sapB=nikB=ec1787053=ec1787761=oppB +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase#[E] COG0473 Isopropylmalate dehydrogenase}: purC#yeaU=leuB, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0015 Adenylosuccinate lyase#[F] COG0104 Adenylosuccinate synthase#[E] COG0111 Phosphoglycerate dehydrogenase#[F] COG0151 Phosphoribosylamine-glycine ligase#[H] COG0157 Nicotinate-nucleotide pyrophosphorylase#[F] COG0167 Dihydroorotate dehydrogenase#[E] COG0460 Homoserine dehydrogenase#[E] COG0498 Threonine synthase#[G] COG0524 Sugar kinases, ribokinase family}: purB#purA#serA#purD#nadC#yeiA_1=pyrD#thrA_2=metL_2#thrC#rbsK=yhfQ=yihV=ec1788071 =ec1788417=yeiC=kdgK, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[F] COG0516 IMP dehydrogenase/GMP reductase}: guaB_1=guaB_3=guaC +Bacili |Escherichia coli |E |allneeded |{[F] COG0015 Adenylosuccinate lyase#[F] COG0104 Adenylosuccinate synthase#[E] COG0111 Phosphoglycerate dehydrogenase#[F] COG0151 Phosphoribosylamine-glycine ligase#[H] COG0157 Nicotinate-nucleotide pyrophosphorylase#[F] COG0167 Dihydroorotate dehydrogenase#[E] COG0460 Homoserine dehydrogenase#[E] COG0498 Threonine synthase#[G] COG0524 Sugar kinases, ribokinase family}: purB#purA#serA#purD#nadC#yeiA_1=pyrD#thrA_2=metL_2#thrC#rbsK=yhfQ=yihV=ec1788071 =ec1788417=yeiC=kdgK, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[HC] COG0543 2-Octaprenylphenol hydroxylase and related flavodoxin oxidoreductases}: ubiB +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[O] COG0638 Proteasome protease subunit HslV}: hslV +Bacili |Escherichia coli |E |allneeded |{[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase#[F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase PurE#[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain#[F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain#[E] COG0065 3-Isopropylmalate dehydratase large subunit#[E] COG0066 3-isopropylmalate dehydratase small subunit#[E] COG0079 Histidinol-phosphate aminotransferase#[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases#[F] COG0150 Phosphoribosylaminoimidazol (AIR) synthetase PurM#[E] COG0160 PLP-dependent aminotransferases#[R] COG0456 Acetyltransferases#[L] COG1082 Predicted endonucleases}: purF#purE#purL_1#purL_2#leuC=ybhJ_1#leuD=ybhJ_2#hisC#mhpF=leuA#purM#argD=goaG=yg jG=cstC=gabT#rimI#ec1787573=yjfW=yiaR=ygbM=gip=yhfP, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]#[E] COG0040 ATP phosphoribosyltransferase (histidine biosynthesis)#[E] COG0077 Prephenate dehydratase#[E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase#[E] COG0107 Imidazoleglycerol-phosphate synthase#[E] COG0118 Glutamine amidotransferase (HisH)#[E] COG0131 Imidazoleglycerol-phosphate dehydratase#[E] COG0137 Argininosuccinate synthase#[E] COG0139 Phosphoribosyl-AMP cyclohydrolase#[E] COG0141 Histidinol dehydrogenase#[E] COG0347 Nitrogen regulatory protein PII#[E] COG0440 Acetolactate synthase, small subunit}: gcl=ilvB=ilvG=ilvI=poxB=ec1788716#hisG#pheA_2#hisA#hisF#hisH#hisB_2#argG#hisI_1# hisD#glnK=glnB#ilvH=ilvN=ilvM, {[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[E] COG0159 Tryptophan synthase alpha chain}: trpA, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[P] COG0226 Periplasmic phosphate-binding protein#[P] COG0573 Phosphate permease#[P] COG1117 ABC-type phosphate transport system, ATPase component}: pstS#pstC#pstB, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[E] COG0345 Pyrroline-5-carboxylate reductase}: proC +Bacili |Escherichia coli |E |allneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA +Bacili |Escherichia coli |E |allneeded |{[C] COG0039 Malate/lactate dehydrogenases}: mdh, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[E] COG0345 Pyrroline-5-carboxylate reductase}: proC +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[F] COG0461 Orotate phosphoribosyltransferase}: pyrE +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[T] COG0784 CheY-like receiver domains}: cheY=barA_3=evgS_4=hnr_1=rcsC_3=torS_2=ec1788724_1 +Bacili |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[F] COG0209 Ribonucleotide reductase alpha subunit}: nrdA=nrdE, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[E] COG0747 Dipeptide/oligopeptide/nickel ABC-type transport systems, periplasmic components}: oppA=sapA=ybaE=dppA=ec1787590=ec1787762=ec1787052 +Bacili |Escherichia coli |E |allneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[N] COG0341 Preprotein translocase subunits SecF#[N] COG0342 Preprotein translocase subunits SecD#[M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase}: secF#secD#rfe=mraY, {[K] COG1309 Transcriptional regulators, AcrR family}: acrR=envR=ec1787938=ycdC=betI=gusR=yijC +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase#[E] COG0436 PLP-dependent aminotransferases#[I] COG0511 Biotin carboxyl carrier protein of acetyl-CoA carboxylase#[L] COG0582 Integrase#[N] COG0616 Periplasmic serine proteases}: birA_2#ec1788722=ybdL=avtA=ec1788627#accB#xerC=fimB=fimE=xerD=int=yfdB=ec1787861 #sppA=sohB +Bacili |Escherichia coli |E |allneeded |{[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]#[E] COG0040 ATP phosphoribosyltransferase (histidine biosynthesis)#[E] COG0077 Prephenate dehydratase#[E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase#[E] COG0107 Imidazoleglycerol-phosphate synthase#[E] COG0118 Glutamine amidotransferase (HisH)#[E] COG0131 Imidazoleglycerol-phosphate dehydratase#[E] COG0137 Argininosuccinate synthase#[E] COG0139 Phosphoribosyl-AMP cyclohydrolase#[E] COG0141 Histidinol dehydrogenase#[E] COG0347 Nitrogen regulatory protein PII#[E] COG0440 Acetolactate synthase, small subunit}: gcl=ilvB=ilvG=ilvI=poxB=ec1788716#hisG#pheA_2#hisA#hisF#hisH#hisB_2#argG#hisI_1# hisD#glnK=glnB#ilvH=ilvN=ilvM, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[K] COG1309 Transcriptional regulators, AcrR family}: acrR=envR=ec1787938=ycdC=betI=gusR=yijC +Bacili |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[P] COG0803 Zn-binding (lipo)protein of the ABC-type Zn transport system (surface adhesin A)}: yebL +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[E] COG0620 Methionine synthase II (cobalamin-independent)}: metE +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[K] COG1309 Transcriptional regulators, AcrR family}: acrR=envR=ec1787938=ycdC=betI=gusR=yijC +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[H] COG0502 Biotin synthase and related enzymes}: bioB +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[R] COG0491 Zn-dependent hydrolases, including glyoxylases}: gloB=ycbL +Bacili |Escherichia coli |E |allneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[E] COG0620 Methionine synthase II (cobalamin-independent)}: metE +Bacili |Escherichia coli |E |allneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[F] COG0503 Adenine/guanine phosphoribosyltransferases}: apt=gpt, {[K] COG1309 Transcriptional regulators, AcrR family}: acrR=envR=ec1787938=ycdC=betI=gusR=yijC +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[L] COG0164 Ribonuclease HII}: rnhB, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[E] COG1605 Chorismate mutase}: pheA_1=tyrA_1 +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[P] COG2217 Cation transport ATPases}: ybaR=yhhO +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[R] COG0042 Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family#[R] COG0577 Predicted permease}: yjbN=yohI=yhdG#ycfU=ycfW=ybjZ_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[T] COG0642 Sensory transduction histidine kinases}: baeS=basS=cpxA=creC=envZ=glnL=hydH +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[EP] COG1173 Dipeptide/oligopeptide/nickel ABC-type transport systems, permease components}: dppC=oppC=nikC=sapC=yejE=ec1787054=ec1787760 +Bacili |Escherichia coli |E |allneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[M] COG0449 Glucosamine-fructose-6-phosphate aminotransferase, contains aminotransferase and phosphosugar isomerase domains}: glmS, {[K] COG1309 Transcriptional regulators, AcrR family}: acrR=envR=ec1787938=ycdC=betI=gusR=yijC +Bacili |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[O] COG0695 Glutaredoxin and related proteins}: yibM=grxA=nrdH=grxB +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[H] COG0452 Flavoprotein involved in panthothenate metabolism}: dfp +Bacili |Bacillus subtilis |B |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: BS_upp#BS_dra, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: BS_asd#BS_dapA=BS_ycbC#BS_dapG=BS_lysC=BS_yclM#BS_comGA, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: BS_araD=BS_ykrY +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: usg=asd#dapA=yagE=nanA=yjhH#thrA_1=lysC=metL_1#yheG=hofB=yggR, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Haemophilus influenzae |H |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: HI1228#HI1116, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: HI0646=HI1433#HI0142=HI0255#HI1632=HI0089_1#HI0298, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: HI0611=HI1012=HI1025 +Bacili |Mycobacterium tuberculosis |R |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: Rv3309c#Rv0478, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: Rv3708c#Rv2753c#Rv3709c#Rv3659c, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: Rv0727c +Bacili |Methanobacterium thermoautotrophicum |T |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: MTH1114#MTH818, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: MTH799#MTH801#MTH802#MTH1702, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: MTH1406 +Bacili |Thermotoga maritima |V |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: TM0721#TM1559, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: TM1523#TM1521#TM1518=TM0547_2#TM1362=TM0837, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: TM1072=TM0283 +Bacili |Escherichia coli |E |allneeded |{[F] COG0015 Adenylosuccinate lyase#[F] COG0104 Adenylosuccinate synthase#[E] COG0111 Phosphoglycerate dehydrogenase#[F] COG0151 Phosphoribosylamine-glycine ligase#[H] COG0157 Nicotinate-nucleotide pyrophosphorylase#[F] COG0167 Dihydroorotate dehydrogenase#[E] COG0460 Homoserine dehydrogenase#[E] COG0498 Threonine synthase#[G] COG0524 Sugar kinases, ribokinase family}: purB#purA#serA#purD#nadC#yeiA_1=pyrD#thrA_2=metL_2#thrC#rbsK=yhfQ=yihV=ec1788071 =ec1788417=yeiC=kdgK, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ +Bacili |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[R] COG0561 Predicted hydrolases of the HAD superfamily}: ybhA=yidA=ec1787043=cof=ec1787067=yigLa +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[H] COG0294 Dihydropteroate synthase}: folP +Bacili |Escherichia coli |E |allneeded |{[J] COG0009 Putative translation factor (SUA5)#[J] COG0130 Pseudouridine synthase}: yciO=yrdC#truB, {[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[I] COG0558 Phosphatidylglycerophosphate synthase}: pgsA=ec1788055=ec1787676 +Bacili |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[E] COG0174 Glutamine synthase#[D] COG0489 ATPases involved in chromosome partitioning, mrp family#[P] COG1226 Eukaryotic-type potassium channels}: ec1787555=glnA#mrp=ec1788374_2=yccC_2#kch=ybaL_2=kefB_2=kefC_2, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD +Bacili |Escherichia coli |E |allneeded |{[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]#[E] COG0040 ATP phosphoribosyltransferase (histidine biosynthesis)#[E] COG0077 Prephenate dehydratase#[E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase#[E] COG0107 Imidazoleglycerol-phosphate synthase#[E] COG0118 Glutamine amidotransferase (HisH)#[E] COG0131 Imidazoleglycerol-phosphate dehydratase#[E] COG0137 Argininosuccinate synthase#[E] COG0139 Phosphoribosyl-AMP cyclohydrolase#[E] COG0141 Histidinol dehydrogenase#[E] COG0347 Nitrogen regulatory protein PII#[E] COG0440 Acetolactate synthase, small subunit}: gcl=ilvB=ilvG=ilvI=poxB=ec1788716#hisG#pheA_2#hisA#hisF#hisH#hisB_2#argG#hisI_1# hisD#glnK=glnB#ilvH=ilvN=ilvM, {[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain#[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase#[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase}: hhoA=hhoB=htrA#murE#murD +Bacili |Escherichia coli |E |allneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[G] COG1130 ABC-type sugar transport system, ATPase component}: ycjV=malK=ugpC=yagC, {[K] COG1309 Transcriptional regulators, AcrR family}: acrR=envR=ec1787938=ycdC=betI=gusR=yijC +Bacili |Escherichia coli |E |oneneeded |{[K] COG1414 Transcriptional regulators, IclR family#[S] COG1490 Uncharacterized ACR}: ec1788131=yagI=iclR=yiaJ=yjhI=ybbU=mhpR#yihZ +Bacili |Escherichia coli |E |oneneeded |{[P] COG2168 Uncharacterized protein DsrH, involved in oxidation of intracellular sulfur}: yheL +Bacili |Escherichia coli |E |oneneeded |{[K] COG1414 Transcriptional regulators, IclR family#[S] COG1490 Uncharacterized ACR}: ec1788131=yagI=iclR=yiaJ=yjhI=ybbU=mhpR#yihZ, {[R] COG1584 Predicted membrane protein}: yaaH +Bacili |Escherichia coli |E |oneneeded |{[G] COG1312 D-mannonate dehydratase#[KG] COG1349 Transcriptional regulators of sugar metabolism#[K] COG1737 Transcriptional regulators, RpiR family#[G] COG1869 Uncharacterized components of ribose/xylose transport systems#[G] COG2017 Galactose mutarotase and related enzymes#[G] COG2115 Xylose isomerase#[F] COG2233 Xanthine/uracil permeases}: uxuA#glpR=yihW=yjhJ=yhaW=ygbI=fucR=ec1787540#yebK=yjcY=yfeT=yfhH#rbsD=fucU#galM= yihR=yphB#xylA#ycdG=uraA=ygfU=ygfO=yicE=ybbY +Bacili |Escherichia coli |E |oneneeded |{[K] COG1802 Transcriptional regulators, GntR family}: ec1787722=yjjM=ydfH=ygaE +Bacili |Escherichia coli |E |oneneeded |{[G] COG1312 D-mannonate dehydratase#[KG] COG1349 Transcriptional regulators of sugar metabolism#[K] COG1737 Transcriptional regulators, RpiR family#[G] COG1869 Uncharacterized components of ribose/xylose transport systems#[G] COG2017 Galactose mutarotase and related enzymes#[G] COG2115 Xylose isomerase#[F] COG2233 Xanthine/uracil permeases}: uxuA#glpR=yihW=yjhJ=yhaW=ygbI=fucR=ec1787540#yebK=yjcY=yfeT=yfhH#rbsD=fucU#galM= yihR=yphB#xylA#ycdG=uraA=ygfU=ygfO=yicE=ybbY +Bacili |Escherichia coli |E |oneneeded |{[H] COG1072 Panthothenate kinase#[E] COG1168 PLP-dependent aminotransferases, MalY/PatB family#[S] COG1660 Uncharacterized BCR, YhbJ/UPF0042 family#[S] COG1666 Uncharacterized BCR, YajQ family#[R] COG2132 Putative multicopper oxidases#[D] COG2177 Cell division protein FtsX#[K] COG2186 Transcriptional regulators, FadR family#[S] COG2258 Uncharacterized BCR, YiiM family#[S] COG2259 Predicted membrane protein}: coaA=yggC#malY#yhbJ#yajQ#yacK=sufI#ftsX#exuR=uxuR=yhcK=lldR=fadR=glcC=pdhR#yiiM# yqjF=yphA, {[P] COG2168 Uncharacterized protein DsrH, involved in oxidation of intracellular sulfur}: yheL +Bacili |Escherichia coli |E |oneneeded |{[G] COG1312 D-mannonate dehydratase#[KG] COG1349 Transcriptional regulators of sugar metabolism#[K] COG1737 Transcriptional regulators, RpiR family#[G] COG1869 Uncharacterized components of ribose/xylose transport systems#[G] COG2017 Galactose mutarotase and related enzymes#[G] COG2115 Xylose isomerase#[F] COG2233 Xanthine/uracil permeases}: uxuA#glpR=yihW=yjhJ=yhaW=ygbI=fucR=ec1787540#yebK=yjcY=yfeT=yfhH#rbsD=fucU#galM= yihR=yphB#xylA#ycdG=uraA=ygfU=ygfO=yicE=ybbY, {[L] COG1715 Mrr restriction endonuclease#[G] COG1877 Trehalose-6-phosphatase}: mrr#otsB +Bacili |Escherichia coli |E |oneneeded |{[K] COG1414 Transcriptional regulators, IclR family#[S] COG1490 Uncharacterized ACR}: ec1788131=yagI=iclR=yiaJ=yjhI=ybbU=mhpR#yihZ, {[S] COG1971 Predicted membrane protein}: ec1788124 +Bacili |Escherichia coli |E |oneneeded |{[G] COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases#[P] COG1535 2,3-Dihydro-2,3 dihydroxybenzoate synthase (isochorismate synthase)#[N] COG1705 Flagellar biosynthesis protein FlgJ, probable N-acetylmuramidase#[P] COG1785 Alkaline phosphatase#[E] COG1897 Homoserine trans-succinylase#[G] COG1904 Glucuronate isomerase#[K] COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding)#[T] COG1956 GAF domain-containing proteins#[C] COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenasefamily#[G] COG2160 L-arabinose isomerase}: celF=melA=glvG#entB#flgJ#phoA#metA#uxaC#ygcP#ec1788136#yqhD#araA +Bacili |Escherichia coli |E |oneneeded |{[H] COG1072 Panthothenate kinase#[E] COG1168 PLP-dependent aminotransferases, MalY/PatB family#[S] COG1660 Uncharacterized BCR, YhbJ/UPF0042 family#[S] COG1666 Uncharacterized BCR, YajQ family#[R] COG2132 Putative multicopper oxidases#[D] COG2177 Cell division protein FtsX#[K] COG2186 Transcriptional regulators, FadR family#[S] COG2258 Uncharacterized BCR, YiiM family#[S] COG2259 Predicted membrane protein}: coaA=yggC#malY#yhbJ#yajQ#yacK=sufI#ftsX#exuR=uxuR=yhcK=lldR=fadR=glcC=pdhR#yiiM# yqjF=yphA +Bacili |Escherichia coli |E |oneneeded |{[K] COG1414 Transcriptional regulators, IclR family#[S] COG1490 Uncharacterized ACR}: ec1788131=yagI=iclR=yiaJ=yjhI=ybbU=mhpR#yihZ +Bacili |Escherichia coli |E |oneneeded |{[G] COG1312 D-mannonate dehydratase#[KG] COG1349 Transcriptional regulators of sugar metabolism#[K] COG1737 Transcriptional regulators, RpiR family#[G] COG1869 Uncharacterized components of ribose/xylose transport systems#[G] COG2017 Galactose mutarotase and related enzymes#[G] COG2115 Xylose isomerase#[F] COG2233 Xanthine/uracil permeases}: uxuA#glpR=yihW=yjhJ=yhaW=ygbI=fucR=ec1787540#yebK=yjcY=yfeT=yfhH#rbsD=fucU#galM= yihR=yphB#xylA#ycdG=uraA=ygfU=ygfO=yicE=ybbY, {[R] COG2068 Uncharacterized MobA-related protein#[R] COG2079 Uncharacterized protein involved in propionate catabolism#[R] COG2234 Predicted aminopeptidases}: ygfJ#prpD#yfbL=iap +Bacili |Escherichia coli |E |oneneeded |{[K] COG1414 Transcriptional regulators, IclR family#[S] COG1490 Uncharacterized ACR}: ec1788131=yagI=iclR=yiaJ=yjhI=ybbU=mhpR#yihZ +Bacili |Escherichia coli |E |oneneeded |{[R] COG1248 Uncharacterized proteins with the alpha/beta hydrolase fold#[OT] COG1391 Glutamine synthetase adenylyltransferase GlnE#[I] COG1946 Acyl-CoA thioesterase#[F] COG1949 Oligoribonuclease (3'->5' exoribonuclease)}: yfbB=ybfF#glnE#tesB#yjeR +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[F] COG0756 dUTPase}: dut +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: dacC=yeeC=dacA=pbpG +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[M] COG1452 Organic solvent tolerance protein OstA}: imp +Mesophile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK +Mesophile |Escherichia coli |E |oneneeded |{[F] COG0756 dUTPase}: dut +Mesophile |Escherichia coli |E |oneneeded |{[F] COG0756 dUTPase}: dut, {[G] COG1299 Phosphotransferase system, fructose-specific IIC component#[G] COG1445 Phosphotransferase system fructose-specific component IIB#[G] COG2190 Phosphotransferase system IIA components}: fruA_3=hrsA_3=frvB_2=frwC=ec1788729#frwB=frvB_1=frwD=fruA_2=hrsA_2=ec1788730#nag E_3=crr=bglF_3 +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[M] COG1792 Rod shape-determining protein MreC}: mreC +Mesophile |Escherichia coli |E |oneneeded |{[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: htrB=ddg=msbB, {[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)#[G] COG1925 Phosphotransferase system, HPr-related proteins}: ptsN=hrsA_1=frvA=ptxA=fruB_1=mtlA_2=frvR_2#fruB_2=ptsH=ycgC_1=ptsO=ec1788726_1 +Mesophile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK +Mesophile |Bacillus subtilis |B |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: BS_ung, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BS_yshB +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: cvpA +Mesophile |Haemophilus influenzae |H |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: HI0018, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HI1206 +Mesophile |Treponema pallidum |L |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: TP0522 +Mesophile |Borrelia burgdorferi |O |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: BB0053, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BB0766 +Mesophile |Helicobacter pylori |U |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: HP1347, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HP0181 +Mesophile |Rickettsia prowazekii |X |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: RP033 +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB +Mesophile |Escherichia coli |E |oneneeded |{[K] COG1508 Sigma-54 (RpoN) and related alternative sigma subunuts}: rpoN, {[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB +Mesophile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[O] COG1764 Stress-induced protein OsmC}: osmC +Mesophile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[T] COG2204 AAA superfamily ATPases with N-terminal receiver domain}: atoC=glnG=hydG=yfhA +Mesophile |Escherichia coli |E |oneneeded |{[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB +Mesophile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[I] COG1182 Acyl carrier protein phosphodiesterase#[P] COG1393 Arsenate reductase ArsG and related proteins, glutaredoxin family}: acpD#yffB=arsG=ec1788991=ec1788841 +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[T] COG1734 DnaK suppressor protein DskA}: dksA +Mesophile |Escherichia coli |E |oneneeded |{[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB +Mesophile |Escherichia coli |E |oneneeded |{[F] COG0756 dUTPase}: dut, {[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2 +Mesophile |Escherichia coli |E |oneneeded |{[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK, {[F] COG1780 NrdI protein involved in ribonucleotide reduction}: nrdI +Mesophile |Escherichia coli |E |oneneeded |{[F] COG0756 dUTPase}: dut, {[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)#[G] COG1925 Phosphotransferase system, HPr-related proteins}: ptsN=hrsA_1=frvA=ptxA=fruB_1=mtlA_2=frvR_2#fruB_2=ptsH=ycgC_1=ptsO=ec1788726_1 +Mesophile |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung +Mesophile |Escherichia coli |E |oneneeded |{[F] COG0813 Purine-nucleoside (and uridine) phosphorylase}: deoD=udp, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -obligate anaerobe |Escherichia coli |E |allneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: ackA=yhaA#gidB#era, {[LKJ] COG0513 Superfamily II DNA and RNA helicases}: srmB=rhlB=dbpA=deaD=rhlE=yfjK -obligate anaerobe |Escherichia coli |E |allneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[LKJ] COG0513 Superfamily II DNA and RNA helicases}: srmB=rhlB=dbpA=deaD=rhlE=yfjK -obligate anaerobe |Escherichia coli |E |allneeded |{[I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase}: plsC=yihG=aas_1, {[LKJ] COG0513 Superfamily II DNA and RNA helicases}: srmB=rhlB=dbpA=deaD=rhlE=yfjK -obligate anaerobe |Escherichia coli |E |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM, {[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -obligate anaerobe |Escherichia coli |E |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: rnhA#recN, {[G] COG1299 Phosphotransferase system, fructose-specific IIC component#[G] COG1445 Phosphotransferase system fructose-specific component IIB#[G] COG2190 Phosphotransferase system IIA components}: fruA_3=hrsA_3=frvB_2=frwC=ec1788729#frwB=frvB_1=frwD=fruA_2=hrsA_2=ec1788730#nag E_3=crr=bglF_3 -obligate anaerobe |Escherichia coli |E |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM, {[M] COG0797 Lipoproteins}: rlpA -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[G] COG0696 Phosphoglyceromutase}: yibO -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[O] COG1764 Stress-induced protein OsmC}: osmC -obligate anaerobe |Escherichia coli |E |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM, {[L] COG0783 Starvation-inducible DNA-binding protein Dps}: dps -obligate anaerobe |Escherichia coli |E |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG -obligate anaerobe |Escherichia coli |E |oneneeded |{[F] COG0813 Purine-nucleoside (and uridine) phosphorylase}: deoD=udp, {[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[F] COG1780 NrdI protein involved in ribonucleotide reduction}: nrdI -obligate anaerobe |Bacillus subtilis |B |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: BS_mutM, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BS_yshB -obligate anaerobe |Escherichia coli |E |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: cvpA -obligate anaerobe |Haemophilus influenzae |H |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: HI0946, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HI1206 -obligate anaerobe |Treponema pallidum |L |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: TP0522 -obligate anaerobe |Borrelia burgdorferi |O |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BB0766 -obligate anaerobe |Helicobacter pylori |U |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HP0181 -obligate anaerobe |Rickettsia prowazekii |X |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: RP033 -obligate anaerobe |Escherichia coli |E |oneneeded |{[G] COG0696 Phosphoglyceromutase}: yibO, {[M] COG1589 Cell division septal protein FtsQ}: ftsQ -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[I] COG1182 Acyl carrier protein phosphodiesterase#[P] COG1393 Arsenate reductase ArsG and related proteins, glutaredoxin family}: acpD#yffB=arsG=ec1788991=ec1788841 -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[F] COG0813 Purine-nucleoside (and uridine) phosphorylase}: deoD=udp -obligate anaerobe |Escherichia coli |E |oneneeded |{[F] COG0813 Purine-nucleoside (and uridine) phosphorylase}: deoD=udp -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -obligate anaerobe |Escherichia coli |E |oneneeded |{[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB, {[O] COG2214 Molecular chaperones, DnaJ class, CbpA family}: cbpA -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair#[R] COG0431 Predicted flavoprotein}: dinP=umuC#yieF -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -obligate anaerobe |Escherichia coli |E |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM, {[M] COG1452 Organic solvent tolerance protein OstA}: imp -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[G] COG1299 Phosphotransferase system, fructose-specific IIC component#[G] COG1445 Phosphotransferase system fructose-specific component IIB#[G] COG2190 Phosphotransferase system IIA components}: fruA_3=hrsA_3=frvB_2=frwC=ec1788729#frwB=frvB_1=frwD=fruA_2=hrsA_2=ec1788730#nag E_3=crr=bglF_3 -obligate anaerobe |Escherichia coli |E |oneneeded |{[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI, {[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB -obligate anaerobe |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -Anaerobic |Escherichia coli |E |allneeded |{[L] COG0164 Ribonuclease HII}: rnhB, {[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -Anaerobic |Escherichia coli |E |allneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: ackA=yhaA#gidB#era, {[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III}: fabH -Anaerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[T] COG0642 Sensory transduction histidine kinases}: baeS=basS=cpxA=creC=envZ=glnL=hydH -Anaerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase}: plsC=yihG=aas_1 -Anaerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: ybiT=uup=yjjK=yheS -Anaerobic |Escherichia coli |E |allneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: ackA=yhaA#gidB#era, {[P] COG0605 Superoxide dismutase}: sodA=sodB -Anaerobic |Escherichia coli |E |allneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF -Anaerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: miaA#rpsA#pcnB=cca#hemN=yggW#murG#clpP#yhhF#polA_2#murZ#ftsI=mrdA#ftsW=mrdB#murC =yjfG#nusB#ybeB#yjeE#murB#ddlA=ddlB#pnp#prfB#yjbC=yciL=yejD=ymfC#mfd#priA#clpX#y beX=ytfL=ypjE=yoaE_2=yfjD=yegH_2#rplY -Anaerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[M] COG0463 Glycosyltransferases involved in cell wall biogenesis}: ec1788588=ec1788692=yaiP=yibD=wcaA=wcaE -Anaerobic |Escherichia coli |E |allneeded |{[F] COG0105 Nucleoside diphosphate kinase}: ndk, {[R] COG0612 Predicted Zn-dependent peptidases}: yhjJ=yddC -Anaerobic |Escherichia coli |E |allneeded |{[LKJ] COG0513 Superfamily II DNA and RNA helicases}: srmB=rhlB=dbpA=deaD=rhlE=yfjK, {[R] COG0612 Predicted Zn-dependent peptidases}: yhjJ=yddC -Anaerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: ackA=yhaA#gidB#era -Anaerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: ycfB#ybaB -Anaerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[GER] COG0477 Permeases}: ycaD=proP=ygcS=mhpT=xylE=araE=galP -Anaerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[M] COG0438 Glycosyltransferases I}: rfaG=wcaL=yefI=rfaB=yefD=wcaC -Anaerobic |Escherichia coli |E |allneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[P] COG0607 Rhodanese-related sulfurtransferases}: pspE=yibN=ec1788054=ybbB=ygaP=sseA=glpE -Anaerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[R] COG0517 CBS domains}: guaB_2=yrbH_2=gutQ_2=ygeV_1=ygiT -Anaerobic |Escherichia coli |E |allneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[P] COG0475 K efflux system, membrane domain}: ybaL_1=kefB_1=kefC_1 -Anaerobic |Escherichia coli |E |allneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: ycfB#ybaB, {[L] COG0708 Exonuclease III}: xthA -Anaerobic |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Anaerobic |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases}: ycfF -Anaerobic |Escherichia coli |E |oneneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK, {[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD -Anaerobic |Escherichia coli |E |oneneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK, {[O] COG2214 Molecular chaperones, DnaJ class, CbpA family}: cbpA -Anaerobic |Escherichia coli |E |oneneeded |{[D] COG2184 Fic protein involved in cell division}: fic, {[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -Anaerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[C] COG0843 Cytochrome c oxidase, heme b and copper-binding subunit}: cyoB -Anaerobic |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU -Anaerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD -Anaerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[R] COG1127 Uncharacterized ABC-type transport system, ATPase component}: yrbF -Anaerobic |Escherichia coli |E |oneneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -Anaerobic |Escherichia coli |E |oneneeded |{[S] COG0316 Uncharacterized ACR, HesB/YadR/YfhF family}: yfhF=ydiC=yadR=yhgI_1, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG -Anaerobic |Escherichia coli |E |oneneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK -Anaerobic |Escherichia coli |E |oneneeded |{[E] COG1760 L-serine deaminase#[T] COG1966 Carbon starvation protein CstA, predicted membrane protein#[I] COG2057 Coenzyme A transferases, subunit B#[O] COG2077 Thiol peroxidase}: sdaA=yhaP=sdaB=yhaQ#cstA=yjiY#atoA=ydiF_2#tpx -Anaerobic |Escherichia coli |E |oneneeded |{[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG -Anaerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[R] COG2194 Predicted membrane-associated, metal-dependent hydrolase}: ybiP=yhbX=yijP=yhjW=yjdB -Anaerobic |Escherichia coli |E |oneneeded |{[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -Anaerobic |Escherichia coli |E |oneneeded |{[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -Anaerobic |Escherichia coli |E |oneneeded |{[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL, {[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -Anaerobic |Escherichia coli |E |oneneeded |{[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -Anaerobic |Escherichia coli |E |oneneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK -Anaerobic |Escherichia coli |E |oneneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK -Anaerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[C] COG0713 NADH-ubiquinone oxidoreductase subunit 11 or 4L (chain K), NuoK/NQO11/Nad4L#[C] COG0838 NADH-ubiquinone oxidoreductase subunit 3 (chain A), NuoA/NQO7/NdhC#[C] COG0839 NADH-ubiquinone oxidoreductase subunit 6 (chain J), NuoJ/NQO10/Nad6#[C] COG1007 NADH-ubiquinone oxidoreductase subunit 2 (chain N), NuoN/NQO14/Nad2#[C] COG1008 NADH-ubiquinone oxidoreductase subunit 4 (chain M), NuoM/NQO13/Nad4}: nuoK#nuoA#nuoJ#nuoN#nuoM -Anaerobic |Escherichia coli |E |oneneeded |{[F] COG0232 dGTP triphosphohydrolase#[H] COG0321 Lipoate-protein ligase B#[J] COG0349 Ribonuclease D#[R] COG0354 Predicted aminomethyltransferase related to GcvT#[C] COG1282 NAD(P)+ transhydrogenase, beta subunit}: dgt#lipB#rnd#ygfZ#pntB, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG -Anaerobic |Escherichia coli |E |oneneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK, {[G] COG1440 Phosphotransferase system cellobiose-specific component IIB#[G] COG1447 Phosphotransferase system cellobiose-specific component IIA#[G] COG1455 Phosphotransferase system cellobiose-specific component IIC#[E] COG2113 Periplasmic binding protein of proline/glycine betaine ABC-type transport system}: celA#celC#celB#proX -Anaerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD -Anaerobic |Escherichia coli |E |oneneeded |{[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -Anaerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[M] COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases}: rfaJ=rfaI -Anaerobic |Escherichia coli |E |oneneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD -Anaerobic |Escherichia coli |E |oneneeded |{[G] COG0738 Fucose permease#[P] COG0753 Catalase#[H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1#[F] COG1972 Nucleoside permease#[R] COG2249 Putative NADPH-quinone reductase, YabF family (modulator of drug activity B)}: fucP#katE#ygdL#yeiJ=yeiM=nupC#mdaB=yabF=ycaK=yheR -Anaerobic |Escherichia coli |E |oneneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK, {[S] COG1288 Uncharacterized membrane protein#[R] COG1823 Predicted Na+-dicarboxylate symporter#[E] COG2195 Di- and tripeptidases}: yfcC#ec1788024#pepD=pepT -Anaerobic |Escherichia coli |E |oneneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY -Anaerobic |Escherichia coli |E |oneneeded |{[HC] COG0654 2-Octaprenyl-6-metoxyphenol hydroxylase and related FAD-dependent oxidoreductases#[C] COG1845 Cytochrome oxidase/quinol oxidases, subunit 3}: ubiH=visC=yleB=mhpA#cyoC, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG -methanogenesis |Escherichia coli |E |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0029 Aspartate oxidase}: nadB, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[E] COG0549 Carbamate kinase}: yahI=yqeA=ybcF -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG0416 Fatty acid/phospholipid biosynthesis enzyme}: plsX, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: mviN#lnt -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: miaA#rpsA#pcnB=cca#hemN=yggW#murG#clpP#yhhF#polA_2#murZ#ftsI=mrdA#ftsW=mrdB#murC =yjfG#nusB#ybeB#yjeE#murB#ddlA=ddlB#pnp#prfB#yjbC=yciL=yejD=ymfC#mfd#priA#clpX#y beX=ytfL=ypjE=yoaE_2=yfjD=yegH_2#rplY -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[G] COG1472 Beta-glucosidase-related glycosidases}: ycfO=bglX -methanogenesis |Escherichia coli |E |oneneeded |{[F] COG0295 Cytidine deaminase#[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)}: cdd#fruK=pfkB -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG0637 Predicted phosphatase/phosphohexomutase#[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase (trmA)}: yqaB=ycjU=yieH=yfbT#trmA=ygcA=ybjF -methanogenesis |Escherichia coli |E |oneneeded |{[D] COG0424 Putative inhibitor of septum formation}: yceF=yhdE, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711 -methanogenesis |Escherichia coli |E |oneneeded |{[D] COG0424 Putative inhibitor of septum formation}: yceF=yhdE, {[F] COG0572 Uridine kinase}: udk -methanogenesis |Escherichia coli |E |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU, {[R] COG1546 Uncharacterized protein CinA/YgaD (competence- and mitomycin-induced)}: ygaD=ydeJ -methanogenesis |Escherichia coli |E |oneneeded |{[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: ybhL=yccA=ybhM, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[H] COG0413 Ketopantoate hydroxymethyltransferase}: panB -methanogenesis |Escherichia coli |E |oneneeded |{[G] COG0153 Galactokinase}: galK, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)#[P] COG0841 Cation efflux system protein}: queA#ybdE=acrB=acrF=acrD=yhiV=yegO=yegN, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[S] COG1765 Uncharacterized ACR}: yhfA -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[S] COG1496 Uncharacterized ACR, YfiH family}: yfiH -methanogenesis |Escherichia coli |E |oneneeded |{[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases}: spoT=relA, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: atpD#atpA#atpG#atpC#atpB#atpF, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Bacillus subtilis |B |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: BS_yacM, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BS_yshB -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: cvpA -methanogenesis |Haemophilus influenzae |H |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: HI0672, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HI1206 -methanogenesis |Treponema pallidum |L |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: TP0512_1, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: TP0522 -methanogenesis |Borrelia burgdorferi |O |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BB0766 -methanogenesis |Helicobacter pylori |U |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: HP1020_1, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HP0181 -methanogenesis |Rickettsia prowazekii |X |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: RP033 -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: dacC=yeeC=dacA=pbpG -methanogenesis |Escherichia coli |E |oneneeded |{[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[R] COG1162 Predicted GTPases}: yjeQ -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[E] COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain#[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase)#[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase#[E] COG1003 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain}: gcvP_1#gcvT#yafB=yqhE=ydbC=ec1787936=ec1788081#gcvP_2 -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[M] COG1792 Rod shape-determining protein MreC}: mreC -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0262 Dihydrofolate reductase}: folA -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG1530 Ribonucleases G and E}: cafA=rne -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[E] COG0685 5,10-methylenetetrahydrofolate reductase}: metF -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[S] COG1984 Uncharacterized ACR#[S] COG2049 Uncharacterized ACR}: ybgK#ybgJ -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0251 Putative translation initiation inhibitor#[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases}: yjgF=ec1788111=yhaR=ec1787245=yjgH#metC=metB, {[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: cmk#yeaZ -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[G] COG0205 6-phosphofructokinase}: pfkA, {[D] COG0424 Putative inhibitor of septum formation}: yceF=yhdE -methanogenesis |Escherichia coli |E |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: nrdF=nrdB -methanogenesis |Escherichia coli |E |oneneeded |{[C] COG0584 Glycerophosphoryl diester phosphodiesterase}: ugpQ=glpQ -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: ybiT=uup=yjjK=yheS -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[M] COG1452 Organic solvent tolerance protein OstA}: imp -methanogenesis |Escherichia coli |E |oneneeded |{[G] COG0191 Fructose/tagatose biphosphate aldolases#[H] COG0192 S-adenosylmethionine synthetase}: gatY=ec1788072=fba=yraC#metK, {[D] COG0424 Putative inhibitor of septum formation}: yceF=yhdE -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG1473 Metal-dependent amidohydrolases/aminoacylases}: ydaJ=ec1787598 -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[P] COG1230 Co/Zn/Cd efflux system component#[S] COG1832 Uncharacterized ACR#[KT] COG1983 Putative stress-responsive transcriptional regulator PspC#[G] COG2182 Maltose-binding periplasmic proteins/domains}: ybgR#ec1787199#pspC#malE -methanogenesis |Escherichia coli |E |oneneeded |{[G] COG1299 Phosphotransferase system, fructose-specific IIC component#[G] COG1445 Phosphotransferase system fructose-specific component IIB#[G] COG2190 Phosphotransferase system IIA components}: fruA_3=hrsA_3=frvB_2=frwC=ec1788729#frwB=frvB_1=frwD=fruA_2=hrsA_2=ec1788730#nag E_3=crr=bglF_3 -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG1098 Ribosomal protein S1 domains}: vacB_2 -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[G] COG1554 Trehalose and maltose hydrolases (possible phosphorylases)#[L] COG1961 Site-specific recombinases, DNA invertase Pin homologs}: ycjT#ec1787638=pin=ec1787827 -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases}: gltD=ygfK_2=yffG_2=ec1788468=ygfT_2 -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[E] COG1446 Asparaginase}: ybiK -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase}: hpt -methanogenesis |Escherichia coli |E |oneneeded |{[L] COG0783 Starvation-inducible DNA-binding protein Dps}: dps, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1182 Acyl carrier protein phosphodiesterase#[P] COG1393 Arsenate reductase ArsG and related proteins, glutaredoxin family}: acpD#yffB=arsG=ec1788991=ec1788841 -methanogenesis |Escherichia coli |E |oneneeded |{[G] COG0698 Ribose 5-phosphate isomerase RpiB}: yjcA, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: yggH, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[S] COG0344 Predicted membrane protein, YgiH/UPF0078 family}: ygiH, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0029 Aspartate oxidase}: nadB, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -methanogenesis |Escherichia coli |E |oneneeded |{[D] COG0424 Putative inhibitor of septum formation}: yceF=yhdE, {[S] COG0658 Uncharacterized BCR, ComEC family}: ycaI_1 -methanogenesis |Escherichia coli |E |oneneeded |{[D] COG0424 Putative inhibitor of septum formation}: yceF=yhdE, {[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)#[G] COG1925 Phosphotransferase system, HPr-related proteins}: ptsN=hrsA_1=frvA=ptxA=fruB_1=mtlA_2=frvR_2#fruB_2=ptsH=ycgC_1=ptsO=ec1788726_1 -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[T] COG1734 DnaK suppressor protein DskA}: dksA -methanogenesis |Escherichia coli |E |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: yhjJ=yddC, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[C] COG0712 FoF1-type ATP synthase delta subunit}: atpH -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[G] COG1653 Sugar-binding periplasmic proteins/domains}: ugpB=ec1787569 -methanogenesis |Escherichia coli |E |oneneeded |{[K] COG0557 Exoribonucleases}: vacB_1=rnb, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases}: tdh=yjjN=gatD=ybdR=rspB=ec1788075=ydjJ -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[O] COG1220 ATP-dependent protease HslUV, ATPase subunit HslU/ClpY}: hslU -methanogenesis |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[M] COG1589 Cell division septal protein FtsQ}: ftsQ -methanogenesis |Escherichia coli |E |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: atpD#atpA#atpG#atpC#atpB#atpF -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[J] COG0251 Putative translation initiation inhibitor#[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases}: yjgF=ec1788111=yhaR=ec1787245=yjgH#metC=metB -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0029 Aspartate oxidase}: nadB, {[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: rpmF#gidA#thdF -methanogenesis |Escherichia coli |E |oneneeded |{[F] COG1435 Thymidine kinase}: tdk -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -methanogenesis |Escherichia coli |E |oneneeded |{[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB -methanogenesis |Escherichia coli |E |oneneeded |{[G] COG0153 Galactokinase}: galK, {[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: ycfB#ybaB -methanogenesis |Escherichia coli |E |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: yfhI=pepA -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: ackA=yhaA#gidB#era -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[M] COG1807 Uncharacterized protein, affecting LPS biosynthesis}: ec1788591 -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[T] COG2204 AAA superfamily ATPases with N-terminal receiver domain}: atoC=glnG=hydG=yfhA -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[J] COG1530 Ribonucleases G and E}: cafA=rne -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[R] COG0666 Ankyrin repeat proteins}: yahD, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[G] COG0383 Alpha-mannosidase#[H] COG2109 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP}: ybgB#btuR -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[E] COG0509 Glycine cleavage system H protein (lipoate-binding)}: gcvH -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[S] COG1426 Uncharacterized proteins, YfgA family}: yfgA -methanogenesis |Escherichia coli |E |oneneeded |{[M] COG0797 Lipoproteins}: rlpA, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases}: gltD=ygfK_2=yffG_2=ec1788468=ygfT_2, {[L] COG0692 Uracil DNA glycosylase}: ung -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[K] COG1544 Ribosome-associated protein Y (PSrp-1)}: yhbH=yfiA -methanogenesis |Escherichia coli |E |oneneeded |{[G] COG0153 Galactokinase}: galK, {[J] COG0828 Ribosomal protein S21}: rpsU -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -methanogenesis |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2 -methanogenesis |Escherichia coli |E |oneneeded |{[M] COG0793 Periplasmic protease}: prc, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP, {[S] COG1862 Uncharacterized secreted proteins, YajC family}: yajC -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[C] COG0280 Phosphotransacetylase}: pta_2=eutI=ec1788806_2, {[D] COG0424 Putative inhibitor of septum formation}: yceF=yhdE -methanogenesis |Escherichia coli |E |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: gmk=phnN#yqgF, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0196 FAD synthase#[R] COG0245 Putative enzyme of deoxyxylulose pathway (terpenoid biosynthesis), YgbB family#[J] COG1190 Lysyl-tRNA synthetases}: yaaC#ygbB#lysU=lysS=yjeA, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[G] COG0153 Galactokinase}: galK, {[I] COG0736 Acyl-carrier protein synthase}: dpj -methanogenesis |Escherichia coli |E |oneneeded |{[R] COG1057 Predicted nucleotidyltransferases}: ybeN, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[E] COG1115 Sodium-alanine symporters}: yaaJ -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0029 Aspartate oxidase}: nadB, {[K] COG0782 Transcription elongation factor}: greA=greB=rnk -methanogenesis |Escherichia coli |E |oneneeded |{[H] COG0095 Lipoate-protein ligase A}: lplA, {[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG1178 Uncharacterized transport system, permease component#[H] COG1840 Thiamine-binding periplasmic proteins}: yabK#tbpA -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[D] COG0424 Putative inhibitor of septum formation}: yceF=yhdE -methanogenesis |Escherichia coli |E |oneneeded |{[L] COG0249 MutS-like ATPases involved in mismatch repair, family 2#[L] COG0323 DNA mismatch repair enzyme (predicted ATPase)}: mutS#mutL, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[F] COG0813 Purine-nucleoside (and uridine) phosphorylase}: deoD=udp -methanogenesis |Escherichia coli |E |oneneeded |{[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins#[O] COG0760 Parvulin-like peptidyl-prolyl isomerase#[R] COG0845 Membrane permeases, predicted cation efflux pumps#[D] COG0849 Predicted ATPases of the HSP70 class involved in cell division}: mltE=slt=dniR_1=mltC=yfhD_2=ygeJ#surA=ppiC=ybaU#ec1788389=ec1787104=acrA=acrE=yh iU=ylcD=yhiI#ftsA, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -methanogenesis |Escherichia coli |E |oneneeded |{[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP -Cocci |Escherichia coli |E |allneeded |{[R] COG0061 Predicted kinase#[D] COG0206 Cell division GTPase FtsZ}: yfjB#ftsZ, {[O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain#[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase#[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase}: hhoA=hhoB=htrA#murE#murD -Cocci |Escherichia coli |E |allneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[T] COG0784 CheY-like receiver domains}: cheY=barA_3=evgS_4=hnr_1=rcsC_3=torS_2=ec1788724_1 -Cocci |Escherichia coli |E |allneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs#[R] COG0628 Predicted permease#[S] COG0668 Uncharacterized ACR, integral membrane protein, YjeP/UPF0003 family}: ybbK=hflC=hflK#perM=ec1787979=ec1787885=yhhT#aefA_2=yjeP_2=yggB=ybiO_2=ec1787591 =ybdG -Cocci |Escherichia coli |E |oneneeded |{[P] COG0288 Carbonic anhydrase}: cynT=yadF, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Cocci |Escherichia coli |E |oneneeded |{[R] COG0661 Predicted unusual protein kinase}: yigR, {[H] COG0669 Phosphopantetheine adenylyltransferase#[N] COG0758 Protein involved in DNA uptake}: kdtB#smf -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Cocci |Escherichia coli |E |oneneeded |{[R] COG0606 Predicted ATPases}: yifB, {[S] COG1357 Uncharacterized low-complexity proteins}: yjcF=yjbI -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ, {[S] COG1971 Predicted membrane protein}: ec1788124 -Cocci |Escherichia coli |E |oneneeded |{[R] COG0661 Predicted unusual protein kinase}: yigR, {[T] COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing)}: csrA -Cocci |Escherichia coli |E |oneneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK -Cocci |Escherichia coli |E |oneneeded |{[S] COG1739 Uncharacterized ACR, YigZ/UPF0029 family}: yigZ, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[S] COG0780 Uncharacterized BCR, YkvM family}: yqcD_2, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[E] COG1027 Aspartate ammonia-lyase#[J] COG1188 Predicted small RNA-binding protein (S4 paralog)#[M] COG1368 Phosphoglycerol transferase MdoB and related proteins, alkaline phosphatase superfamily#[S] COG1576 Uncharacterized ACR}: aspA#yrfH#mdoB#ybeA, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[E] COG0345 Pyrroline-5-carboxylate reductase}: proC -Cocci |Escherichia coli |E |oneneeded |{[E] COG0031 Cysteine synthase/cystathionine beta-synthase#[R] COG0325 Predicted enzyme with a TIM-barrel fold#[E] COG1045 Serine acetyltransferase#[O] COG1225 Peroxiredoxins}: cysK=cysM#yggS#cysE#bcp, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[R] COG0606 Predicted ATPases}: yifB, {[R] COG1752 Putative phosphoesterases, homologs of neuropathy target esterase}: ychK=yjjU -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ, {[S] COG2104 Uncharacterized ACR, possibly involved in thiamine biosynthesis}: thiS -Cocci |Escherichia coli |E |oneneeded |{[M] COG0818 Diacylglycerol kinase#[J] COG2264 Ribosomal protein L11 methylase}: dgkA#prmA, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[C] COG1034 NADH dehydrogenase 75 kD subunit (chain G), NuoG/NQO3/Nad11}: nuoG, {[C] COG1726 Membrane-bound Fe-S proteins, RfnC family}: ec1787916 -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -Cocci |Escherichia coli |E |oneneeded |{[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[G] COG0380 Trehalose-6-phosphate synthase}: otsA, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Cocci |Escherichia coli |E |oneneeded |{[C] COG1034 NADH dehydrogenase 75 kD subunit (chain G), NuoG/NQO3/Nad11}: nuoG, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB -Cocci |Escherichia coli |E |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: folC, {[R] COG0606 Predicted ATPases}: yifB -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Cocci |Escherichia coli |E |oneneeded |{[G] COG0738 Fucose permease#[P] COG0753 Catalase#[H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1#[F] COG1972 Nucleoside permease#[R] COG2249 Putative NADPH-quinone reductase, YabF family (modulator of drug activity B)}: fucP#katE#ygdL#yeiJ=yeiM=nupC#mdaB=yabF=ycaK=yheR, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[E] COG1760 L-serine deaminase#[T] COG1966 Carbon starvation protein CstA, predicted membrane protein#[I] COG2057 Coenzyme A transferases, subunit B#[O] COG2077 Thiol peroxidase}: sdaA=yhaP=sdaB=yhaQ#cstA=yjiY#atoA=ydiF_2#tpx, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Cocci |Escherichia coli |E |oneneeded |{[R] COG2194 Predicted membrane-associated, metal-dependent hydrolase}: ybiP=yhbX=yijP=yhjW=yjdB, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: folC -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG -Cocci |Escherichia coli |E |oneneeded |{[R] COG0606 Predicted ATPases}: yifB, {[S] COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF}: ec1787441 -Cocci |Escherichia coli |E |oneneeded |{[FP] COG0248 Exopolyphosphatase}: gppA=ppx, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[R] COG0820 Predicted Fe-S-cluster redox enzyme}: yfgB, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: yhjJ=yddC, {[O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family#[R] COG0824 Predicted esterase}: ppiB=ppiA#ybgC=ybaW -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[M] COG0797 Lipoproteins}: rlpA -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[O] COG1220 ATP-dependent protease HslUV, ATPase subunit HslU/ClpY}: hslU -Cocci |Escherichia coli |E |oneneeded |{[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Cocci |Escherichia coli |E |oneneeded |{[G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase}: eda=dgoA_1, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[N] COG1256 Flagellar hook-associated protein FlgK#[N] COG1291 Flagellar motor component MotA#[N] COG1344 Flagellin and related hook-associated protein FlgL#[N] COG1345 Flagellar hook-associated protein FliD#[N] COG1516 Flagellar protein FliS#[N] COG1558 Flagellar basal body rod protein FlgC#[N] COG1580 Membrane-associated flagellar protein FliL#[N] COG1677 Flagellar hook-basal body protein FliE#[N] COG1749 Flagellar basal body and hook proteins#[N] COG1815 Flagellar basal body protein FlgB#[N] COG1843 Flagellar hook capping protein FlgD#[N] COG1868 Flagellar motor switch protein FliM}: flgK#motA#fliC=flgL#fliD#fliS#flgC#fliL#fliE#flgE=flgG=flgF#flgB#flgD#fliM -Cocci |Escherichia coli |E |oneneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: rnhA#recN, {[R] COG0606 Predicted ATPases}: yifB -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[L] COG0783 Starvation-inducible DNA-binding protein Dps}: dps -Cocci |Escherichia coli |E |oneneeded |{[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[J] COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)#[P] COG0841 Cation efflux system protein}: queA#ybdE=acrB=acrF=acrD=yhiV=yegO=yegN -Cocci |Escherichia coli |E |oneneeded |{[L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase}: yraN, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[M] COG1589 Cell division septal protein FtsQ}: ftsQ -Cocci |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[C] COG1034 NADH dehydrogenase 75 kD subunit (chain G), NuoG/NQO3/Nad11}: nuoG -Cocci |Escherichia coli |E |oneneeded |{[L] COG0415 Deoxypyrimidine photolyase}: phrB, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Cocci |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ, {[L] COG1715 Mrr restriction endonuclease#[G] COG1877 Trehalose-6-phosphatase}: mrr#otsB -Cocci |Escherichia coli |E |oneneeded |{[H] COG0669 Phosphopantetheine adenylyltransferase#[N] COG0758 Protein involved in DNA uptake}: kdtB#smf -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Cocci |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[P] COG2168 Uncharacterized protein DsrH, involved in oxidation of intracellular sulfur}: yheL -Cocci |Bacillus subtilis |B |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: BS_comER=BS_proH=BS_ykeA=BS_yqjO, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BS_yshB -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: cvpA -Cocci |Haemophilus influenzae |H |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: HI0307, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HI1206 -Cocci |Treponema pallidum |L |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: TP0797, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: TP0522 -Cocci |Borrelia burgdorferi |O |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BB0766 -Cocci |Helicobacter pylori |U |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: HP1158, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HP0181 -Cocci |Rickettsia prowazekii |X |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: RP033 -Cocci |Escherichia coli |E |oneneeded |{[P] COG0288 Carbonic anhydrase}: cynT=yadF, {[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins#[O] COG0760 Parvulin-like peptidyl-prolyl isomerase#[R] COG0845 Membrane permeases, predicted cation efflux pumps#[D] COG0849 Predicted ATPases of the HSP70 class involved in cell division}: mltE=slt=dniR_1=mltC=yfhD_2=ygeJ#surA=ppiC=ybaU#ec1788389=ec1787104=acrA=acrE=yh iU=ylcD=yhiI#ftsA -Cocci |Escherichia coli |E |oneneeded |{[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ, {[I] COG2084 3-hydroxyisobutyrate dehydrogenase and related proteins}: yhaE=ybbQ=ygbJ=yihU -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[R] COG0666 Ankyrin repeat proteins}: yahD -Cocci |Escherichia coli |E |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: folC, {[S] COG1968 Uncharacterized ACR, bacitracin resistance protein BacA}: bacA -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[M] COG1452 Organic solvent tolerance protein OstA}: imp -Cocci |Escherichia coli |E |oneneeded |{[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[D] COG2184 Fic protein involved in cell division}: fic, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[R] COG0612 Predicted Zn-dependent peptidases}: yhjJ=yddC -Cocci |Escherichia coli |E |oneneeded |{[R] COG1127 Uncharacterized ABC-type transport system, ATPase component}: yrbF, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[C] COG1034 NADH dehydrogenase 75 kD subunit (chain G), NuoG/NQO3/Nad11}: nuoG, {[R] COG1040 Predicted amidophosphoribosyltransferases}: yhgH -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[G] COG1472 Beta-glucosidase-related glycosidases}: ycfO=bglX -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ, {[R] COG1584 Predicted membrane protein}: yaaH -Cocci |Escherichia coli |E |oneneeded |{[M] COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases}: rfaJ=rfaI, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: folC -Cocci |Escherichia coli |E |oneneeded |{[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI, {[C] COG1034 NADH dehydrogenase 75 kD subunit (chain G), NuoG/NQO3/Nad11}: nuoG -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ -Cocci |Escherichia coli |E |oneneeded |{[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: glmU -Cocci |Escherichia coli |E |oneneeded |{[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[H] COG0285 Folylpolyglutamate synthase}: folC -Cocci |Escherichia coli |E |oneneeded |{[L] COG1943 Predicted transposase}: yafM, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Cocci |Escherichia coli |E |oneneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC -Cocci |Escherichia coli |E |oneneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[C] COG1894 NADH-ubiquinone oxidoreductase, NADH-binding (51 kD) subunit, NuoF/NQO1#[C] COG1905 NADH-ubiquinone oxidoreductase 24 kD subunit, NuoE/NQO2}: nuoF#nuoE -Cocci |Escherichia coli |E |oneneeded |{[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2, {[L] COG2256 Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase}: ycaJ -Cocci |Escherichia coli |E |oneneeded |{[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ, {[R] COG2068 Uncharacterized MobA-related protein#[R] COG2079 Uncharacterized protein involved in propionate catabolism#[R] COG2234 Predicted aminopeptidases}: ygfJ#prpD#yfbL=iap -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX -Hyperthermophile |Escherichia coli |E |oneneeded |{[P] COG0605 Superoxide dismutase}: sodA=sodB -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU, {[L] COG1715 Mrr restriction endonuclease#[G] COG1877 Trehalose-6-phosphatase}: mrr#otsB -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[G] COG1299 Phosphotransferase system, fructose-specific IIC component#[G] COG1445 Phosphotransferase system fructose-specific component IIB#[G] COG2190 Phosphotransferase system IIA components}: fruA_3=hrsA_3=frvB_2=frwC=ec1788729#frwB=frvB_1=frwD=fruA_2=hrsA_2=ec1788730#nag E_3=crr=bglF_3 -Hyperthermophile |Escherichia coli |E |oneneeded |{[P] COG0605 Superoxide dismutase}: sodA=sodB, {[F] COG0813 Purine-nucleoside (and uridine) phosphorylase}: deoD=udp -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: nrdF=nrdB -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[K] COG1508 Sigma-54 (RpoN) and related alternative sigma subunuts}: rpoN -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY -Hyperthermophile |Escherichia coli |E |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: ybiT=uup=yjjK=yheS, {[M] COG0562 UDP-galactopyranose mutase}: yefE -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[T] COG1734 DnaK suppressor protein DskA}: dksA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[G] COG1440 Phosphotransferase system cellobiose-specific component IIB#[G] COG1447 Phosphotransferase system cellobiose-specific component IIA#[G] COG1455 Phosphotransferase system cellobiose-specific component IIC#[E] COG2113 Periplasmic binding protein of proline/glycine betaine ABC-type transport system}: celA#celC#celB#proX -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: ygdN=amiB=amiA -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU, {[I] COG2084 3-hydroxyisobutyrate dehydrogenase and related proteins}: yhaE=ybbQ=ygbJ=yihU -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[J] COG0828 Ribosomal protein S21}: rpsU -Hyperthermophile |Escherichia coli |E |oneneeded |{[P] COG0288 Carbonic anhydrase}: cynT=yadF, {[J] COG0828 Ribosomal protein S21}: rpsU -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[M] COG1452 Organic solvent tolerance protein OstA}: imp -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[L] COG1330 Exonuclease V gamma subunit, RecC}: recC -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU, {[S] COG2104 Uncharacterized ACR, possibly involved in thiamine biosynthesis}: thiS -Hyperthermophile |Escherichia coli |E |oneneeded |{[G] COG0380 Trehalose-6-phosphate synthase}: otsA, {[J] COG0828 Ribosomal protein S21}: rpsU -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: ybhL=yccA=ybhM -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[G] COG1640 4-alpha-glucanotransferase}: malQ -Hyperthermophile |Escherichia coli |E |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: nrdF=nrdB, {[P] COG0605 Superoxide dismutase}: sodA=sodB -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU -Hyperthermophile |Escherichia coli |E |oneneeded |{[R] COG0661 Predicted unusual protein kinase}: yigR, {[J] COG0828 Ribosomal protein S21}: rpsU -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[S] COG1496 Uncharacterized ACR, YfiH family}: yfiH -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[T] COG2204 AAA superfamily ATPases with N-terminal receiver domain}: atoC=glnG=hydG=yfhA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[S] COG1288 Uncharacterized membrane protein#[R] COG1823 Predicted Na+-dicarboxylate symporter#[E] COG2195 Di- and tripeptidases}: yfcC#ec1788024#pepD=pepT -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[S] COG1652 Uncharacterized BCR#[S] COG1671 Uncharacterized BCR, YaiI/YqxD family}: ygaU#yaiI -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[L] COG0783 Starvation-inducible DNA-binding protein Dps}: dps -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[R] COG1272 Predicted membrane proteins, hemolysin III homologs#[C] COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs#[C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs}: yqfA#ygeT=ygfM=yagS#yagT=ygfN_1=ygeU -Hyperthermophile |Escherichia coli |E |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: yfhI=pepA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[M] COG0797 Lipoproteins}: rlpA -Hyperthermophile |Escherichia coli |E |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: nrdF=nrdB, {[F] COG1413 Phycocyanin alpha-subunit phycocyanobilin lyase and related proteins, CpcE/NblB family}: yibA -Hyperthermophile |Escherichia coli |E |oneneeded |{[P] COG0605 Superoxide dismutase}: sodA=sodB, {[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU -Hyperthermophile |Escherichia coli |E |oneneeded |{[O] COG0225 Peptide methionine sulfoxide reductase#[O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase}: msrA#yeaA, {[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: ybiT=uup=yjjK=yheS -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family#[R] COG0824 Predicted esterase}: ppiB=ppiA#ybgC=ybaW, {[J] COG0828 Ribosomal protein S21}: rpsU -Hyperthermophile |Escherichia coli |E |oneneeded |{[P] COG0605 Superoxide dismutase}: sodA=sodB -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[N] COG1388 LysM-repeat proteins and domains}: dniR_2 -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)#[G] COG1925 Phosphotransferase system, HPr-related proteins}: ptsN=hrsA_1=frvA=ptxA=fruB_1=mtlA_2=frvR_2#fruB_2=ptsH=ycgC_1=ptsO=ec1788726_1 -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[M] COG1792 Rod shape-determining protein MreC}: mreC -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[O] COG2214 Molecular chaperones, DnaJ class, CbpA family}: cbpA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: ybiT=uup=yjjK=yheS -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[M] COG1589 Cell division septal protein FtsQ}: ftsQ -Hyperthermophile |Escherichia coli |E |oneneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: ybiT=uup=yjjK=yheS, {[M] COG1087 UDP-glucose 4-epimerase}: galE -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU, {[R] COG1408 Predicted phosphohydrolases}: yaeI -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU, {[R] COG2068 Uncharacterized MobA-related protein#[R] COG2079 Uncharacterized protein involved in propionate catabolism#[R] COG2234 Predicted aminopeptidases}: ygfJ#prpD#yfbL=iap -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK -Hyperthermophile |Bacillus subtilis |B |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: BS_yqgN, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BS_yshB -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: cvpA -Hyperthermophile |Haemophilus influenzae |H |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: HI0858, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HI1206 -Hyperthermophile |Treponema pallidum |L |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: TP0694, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: TP0522 -Hyperthermophile |Borrelia burgdorferi |O |oneneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BB0766 -Hyperthermophile |Helicobacter pylori |U |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: HP0761, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HP0181 -Hyperthermophile |Rickettsia prowazekii |X |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: RP461, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: RP033 -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[T] COG2200 Diguanylate cyclase/phosphodiesterase domain 2 (EAL)}: yahA=yhjH=ec1788000=yegE_4=yfeA_3=yhdA_3=yhjK_3 -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: dacC=yeeC=dacA=pbpG -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[R] COG0666 Ankyrin repeat proteins}: yahD -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2 -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[L] COG0692 Uracil DNA glycosylase}: ung -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU, {[L] COG1194 A/G-specific DNA glycosylase}: mutY -Hyperthermophile |Escherichia coli |E |oneneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[G] COG1626 Neutral trehalase}: treA=treF -Hyperthermophile |Escherichia coli |E |oneneeded |{[J] COG0828 Ribosomal protein S21}: rpsU -Halophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[L] COG1194 A/G-specific DNA glycosylase}: mutY -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[G] COG1626 Neutral trehalase}: treA=treF -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG -Halophile |Escherichia coli |E |oneneeded |{[K] COG1508 Sigma-54 (RpoN) and related alternative sigma subunuts}: rpoN -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[R] COG1272 Predicted membrane proteins, hemolysin III homologs#[C] COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs#[C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs}: yqfA#ygeT=ygfM=yagS#yagT=ygfN_1=ygeU -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[S] COG1288 Uncharacterized membrane protein#[R] COG1823 Predicted Na+-dicarboxylate symporter#[E] COG2195 Di- and tripeptidases}: yfcC#ec1788024#pepD=pepT -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[S] COG1652 Uncharacterized BCR#[S] COG1671 Uncharacterized BCR, YaiI/YqxD family}: ygaU#yaiI -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[L] COG1330 Exonuclease V gamma subunit, RecC}: recC -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[N] COG1388 LysM-repeat proteins and domains}: dniR_2 -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[G] COG1440 Phosphotransferase system cellobiose-specific component IIB#[G] COG1447 Phosphotransferase system cellobiose-specific component IIA#[G] COG1455 Phosphotransferase system cellobiose-specific component IIC#[E] COG2113 Periplasmic binding protein of proline/glycine betaine ABC-type transport system}: celA#celC#celB#proX -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[K] COG1508 Sigma-54 (RpoN) and related alternative sigma subunuts}: rpoN -Halophile |Escherichia coli |E |oneneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[R] COG1408 Predicted phosphohydrolases}: yaeI -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY -Halophile |Escherichia coli |E |oneneeded |{[L] COG1194 A/G-specific DNA glycosylase}: mutY, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB -Sulfur Metabolisis |Escherichia coli |E |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[R] COG1136 ABC-type (unclassified) transport system, ATPase component}: ycfV=ybjZ_1=ybbA=phnL=yejW -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[P] COG1553 Uncharacterized ACR involved in intracellular sulfur reduction}: ychN=yheN -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[M] COG1210 UDP-glucose pyrophosphorylase}: galU=galF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[E] COG0241 Histidinol phosphatase and related phosphatases#[G] COG0279 Phosphoheptose isomerase}: yaeD=hisB_1#gmhA=yraO -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[C] COG1034 NADH dehydrogenase 75 kD subunit (chain G), NuoG/NQO3/Nad11}: nuoG -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0698 Ribose 5-phosphate isomerase RpiB}: yjcA, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[O] COG0225 Peptide methionine sulfoxide reductase#[O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase}: msrA#yeaA, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[O] COG0826 Protease related to collagenase}: ydcP=yegQ=yhbU=yhbV -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG1151 6Fe-6S prismane cluster-containing protein}: ybjW -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: cmk#yeaZ, {[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: tktA=tktB#yhfD=yjcU=yjhK, {[T] COG2199 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF)}: yaiC_2=ydeH_2=yegE_3=yfeA_2=yfiN_2=yhdA_2=yhjK_2 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[J] COG1098 Ribosomal protein S1 domains}: vacB_2 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[C] COG1894 NADH-ubiquinone oxidoreductase, NADH-binding (51 kD) subunit, NuoF/NQO1#[C] COG1905 NADH-ubiquinone oxidoreductase 24 kD subunit, NuoE/NQO2}: nuoF#nuoE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[G] COG1299 Phosphotransferase system, fructose-specific IIC component#[G] COG1445 Phosphotransferase system fructose-specific component IIB#[G] COG2190 Phosphotransferase system IIA components}: fruA_3=hrsA_3=frvB_2=frwC=ec1788729#frwB=frvB_1=frwD=fruA_2=hrsA_2=ec1788730#nag E_3=crr=bglF_3 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0692 Uracil DNA glycosylase}: ung, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[R] COG0110 Acetyltransferases (the isoleucine patch superfamily)}: wcaB=yefH=ylaD=wcaF=lacA=ec1786556=ec1787698, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: miaA#rpsA#pcnB=cca#hemN=yggW#murG#clpP#yhhF#polA_2#murZ#ftsI=mrdA#ftsW=mrdB#murC =yjfG#nusB#ybeB#yjeE#murB#ddlA=ddlB#pnp#prfB#yjbC=yciL=yejD=ymfC#mfd#priA#clpX#y beX=ytfL=ypjE=yoaE_2=yfjD=yegH_2#rplY, {[P] COG0474 Cation transport ATPases}: mgtA -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[R] COG1546 Uncharacterized protein CinA/YgaD (competence- and mitomycin-induced)}: ygaD=ydeJ -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[R] COG0110 Acetyltransferases (the isoleucine patch superfamily)}: wcaB=yefH=ylaD=wcaF=lacA=ec1786556=ec1787698, {[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: ackA=yhaA#gidB#era -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0696 Phosphoglyceromutase}: yibO, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0191 Fructose/tagatose biphosphate aldolases#[H] COG0192 S-adenosylmethionine synthetase}: gatY=ec1788072=fba=yraC#metK, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases}: spoT=relA, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[S] COG0390 Uncharacterized ACR (membrane protein)}: ybbM -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[S] COG0658 Uncharacterized BCR, ComEC family}: ycaI_1, {[R] COG0679 Predicted permeases}: ec1788715 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: rpmF#gidA#thdF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: tktA=tktB#yhfD=yjcU=yjhK, {[O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain#[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase#[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase}: hhoA=hhoB=htrA#murE#murD -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[I] COG1182 Acyl carrier protein phosphodiesterase#[P] COG1393 Arsenate reductase ArsG and related proteins, glutaredoxin family}: acpD#yffB=arsG=ec1788991=ec1788841 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)}: aslB=ec1787774 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[M] COG1087 UDP-glucose 4-epimerase}: galE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[E] COG1921 Selenocysteine synthase [L-seryl-tRNA(Ser) selenium transferase]}: selA -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: dxs -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[P] COG0474 Cation transport ATPases}: mgtA, {[M] COG0793 Periplasmic protease}: prc -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[S] COG2215 Predicted membrane protein}: yohM -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[S] COG0344 Predicted membrane protein, YgiH/UPF0078 family}: ygiH, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[R] COG0679 Predicted permeases}: ec1788715 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[E] COG0520 Selenocysteine lyase}: ec1787970=ygdJ, {[R] COG0679 Predicted permeases}: ec1788715 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[O] COG1764 Stress-induced protein OsmC}: osmC -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[F] COG0295 Cytidine deaminase#[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)}: cdd#fruK=pfkB, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0249 MutS-like ATPases involved in mismatch repair, family 2#[L] COG0323 DNA mismatch repair enzyme (predicted ATPase)}: mutS#mutL, {[M] COG1210 UDP-glucose pyrophosphorylase}: galU=galF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[I] COG0736 Acyl-carrier protein synthase}: dpj -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)#[G] COG1925 Phosphotransferase system, HPr-related proteins}: ptsN=hrsA_1=frvA=ptxA=fruB_1=mtlA_2=frvR_2#fruB_2=ptsH=ycgC_1=ptsO=ec1788726_1 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[I] COG0416 Fatty acid/phospholipid biosynthesis enzyme}: plsX, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: yjeK -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis}: ec1788587=wecE, {[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: ycfB#ybaB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: sms, {[M] COG1210 UDP-glucose pyrophosphorylase}: galU=galF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[H] COG0132 Dethiobiotin synthetase}: bioD=ec1787877, {[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[F] COG1435 Thymidine kinase}: tdk -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[K] COG0557 Exoribonucleases}: vacB_1=rnb, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: tktA=tktB#yhfD=yjcU=yjhK, {[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[P] COG0474 Cation transport ATPases}: mgtA, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[H] COG0502 Biotin synthase and related enzymes}: bioB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[R] COG1057 Predicted nucleotidyltransferases}: ybeN -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[C] COG0712 FoF1-type ATP synthase delta subunit}: atpH, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair#[R] COG0431 Predicted flavoprotein}: dinP=umuC#yieF, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: ruvC, {[M] COG1210 UDP-glucose pyrophosphorylase}: galU=galF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[R] COG1923 Uncharacterized ACR, host factor I protein Hfq}: hfq -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[N] COG1952 Preprotein translocase subunit SecB}: secB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[S] COG1944 Uncharacterized ACR}: ycaO -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[H] COG0262 Dihydrofolate reductase}: folA, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: yggH, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[P] COG0474 Cation transport ATPases}: mgtA, {[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: mviN#lnt -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0562 UDP-galactopyranose mutase}: yefE, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: tktA=tktB#yhfD=yjcU=yjhK, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[R] COG0110 Acetyltransferases (the isoleucine patch superfamily)}: wcaB=yefH=ylaD=wcaF=lacA=ec1786556=ec1787698, {[J] COG0828 Ribosomal protein S21}: rpsU -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: nrdF=nrdB, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase}: hpt, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[H] COG0196 FAD synthase#[R] COG0245 Putative enzyme of deoxyxylulose pathway (terpenoid biosynthesis), YgbB family#[J] COG1190 Lysyl-tRNA synthetases}: yaaC#ygbB#lysU=lysS=yjeA, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[C] COG0584 Glycerophosphoryl diester phosphodiesterase}: ugpQ=glpQ, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[C] COG0280 Phosphotransacetylase}: pta_2=eutI=ec1788806_2, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: atpD#atpA#atpG#atpC#atpB#atpF, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: tktA=tktB#yhfD=yjcU=yjhK -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0176 Transaldolase}: mipB=talA=talC=talB, {[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[F] COG0813 Purine-nucleoside (and uridine) phosphorylase}: deoD=udp -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: gmk=phnN#yqgF, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[F] COG0572 Uridine kinase}: udk, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[R] COG0661 Predicted unusual protein kinase}: yigR -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[R] COG1123 ATPase components of uncharacterized ABC-type transport system, contain duplicated ATPase domain}: ec1787051=yejF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[P] COG0474 Cation transport ATPases}: mgtA -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[R] COG1162 Predicted GTPases}: yjeQ -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[R] COG1242 Uncharacterized FeS oxidoreductases}: yhcC -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0205 6-phosphofructokinase}: pfkA, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[E] COG0260 Leucyl aminopeptidase}: yfhI=pepA, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[P] COG0474 Cation transport ATPases}: mgtA, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[F] COG1780 NrdI protein involved in ribonucleotide reduction}: nrdI -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[N] COG0811 Biopolymer transport proteins}: tolQ=exbB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis}: ec1788587=wecE -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: tktA=tktB#yhfD=yjcU=yjhK, {[P] COG0605 Superoxide dismutase}: sodA=sodB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2 -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB -Sulfur Metabolisis |Escherichia coli |E |oneneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2 -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2, {[N] COG1952 Preprotein translocase subunit SecB}: secB -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2, {[R] COG1584 Predicted membrane protein}: yaaH, {[N] COG1952 Preprotein translocase subunit SecB}: secB -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2, {[S] COG1729 Uncharacterized BCR#[C] COG2009 Cytochrome b subunit of succinate dehydrogenase#[H] COG2227 2-Octaprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase UbiG/COQ3}: ybgF#sdhC#ubiG -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2 -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2 -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2, {[N] COG1952 Preprotein translocase subunit SecB}: secB, {[S] COG1971 Predicted membrane protein}: ec1788124 -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2, {[P] COG1965 Protein implicated in iron transport, frataxin homolog}: cyaY -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2 -intracellular parasite |Escherichia coli |E |oneneeded |{[S] COG1322 Uncharacterized BCR, YigN family}: yigN -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1299 Phosphotransferase system, fructose-specific IIC component#[G] COG1445 Phosphotransferase system fructose-specific component IIB#[G] COG2190 Phosphotransferase system IIA components}: fruA_3=hrsA_3=frvB_2=frwC=ec1788729#frwB=frvB_1=frwD=fruA_2=hrsA_2=ec1788730#nag E_3=crr=bglF_3, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2, {[S] COG1806 Uncharacterized BCR, YdiA family}: ydiA -intracellular parasite |Escherichia coli |E |oneneeded |{[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2, {[N] COG1952 Preprotein translocase subunit SecB}: secB -extracellular parasite |Escherichia coli |E |allneeded |{[C] COG0039 Malate/lactate dehydrogenases}: mdh, {[S] COG0043 Uncharacterized ACR, YigC family#[H] COG0163 3-octaprenyl-4-hydroxybenzoate decarboxylase}: yigC#ubiX, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[I] COG0688 Phosphatidylserine decarboxylase}: psd -extracellular parasite |Escherichia coli |E |allneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[L] COG0608 Single-stranded DNA-specific exonuclease}: recJ, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -extracellular parasite |Escherichia coli |E |allneeded |{[S] COG0043 Uncharacterized ACR, YigC family#[H] COG0163 3-octaprenyl-4-hydroxybenzoate decarboxylase}: yigC#ubiX, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[E] COG0531 Amino acid transporters}: yjeH=yhfM=yeeF=ycjJ=ybaT=potE=yjdE, {[I] COG0688 Phosphatidylserine decarboxylase}: psd -extracellular parasite |Escherichia coli |E |allneeded |{[J] COG0009 Putative translation factor (SUA5)#[J] COG0130 Pseudouridine synthase}: yciO=yrdC#truB, {[S] COG0043 Uncharacterized ACR, YigC family#[H] COG0163 3-octaprenyl-4-hydroxybenzoate decarboxylase}: yigC#ubiX, {[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF -extracellular parasite |Escherichia coli |E |allneeded |{[J] COG0009 Putative translation factor (SUA5)#[J] COG0130 Pseudouridine synthase}: yciO=yrdC#truB, {[S] COG0043 Uncharacterized ACR, YigC family#[H] COG0163 3-octaprenyl-4-hydroxybenzoate decarboxylase}: yigC#ubiX, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[I] COG0688 Phosphatidylserine decarboxylase}: psd -extracellular parasite |Escherichia coli |E |allneeded |{[S] COG0043 Uncharacterized ACR, YigC family#[H] COG0163 3-octaprenyl-4-hydroxybenzoate decarboxylase}: yigC#ubiX, {[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -extracellular parasite |Escherichia coli |E |allneeded |{[S] COG0043 Uncharacterized ACR, YigC family#[H] COG0163 3-octaprenyl-4-hydroxybenzoate decarboxylase}: yigC#ubiX, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA -extracellular parasite |Escherichia coli |E |allneeded |{[S] COG0043 Uncharacterized ACR, YigC family#[H] COG0163 3-octaprenyl-4-hydroxybenzoate decarboxylase}: yigC#ubiX, {[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[I] COG0688 Phosphatidylserine decarboxylase}: psd -extracellular parasite |Escherichia coli |E |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase#[E] COG0436 PLP-dependent aminotransferases#[I] COG0511 Biotin carboxyl carrier protein of acetyl-CoA carboxylase#[L] COG0582 Integrase#[N] COG0616 Periplasmic serine proteases}: birA_2#ec1788722=ybdL=avtA=ec1788627#accB#xerC=fimB=fimE=xerD=int=yfdB=ec1787861 #sppA=sohB, {[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: phnP -extracellular parasite |Escherichia coli |E |allneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[R] COG0457 TPR-repeat-containing proteins}: yhjL=nrfG=ec1788947=yhbM, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -extracellular parasite |Escherichia coli |E |allneeded |{[C] COG0039 Malate/lactate dehydrogenases}: mdh, {[S] COG0043 Uncharacterized ACR, YigC family#[H] COG0163 3-octaprenyl-4-hydroxybenzoate decarboxylase}: yigC#ubiX, {[N] COG0341 Preprotein translocase subunits SecF#[N] COG0342 Preprotein translocase subunits SecD#[M] COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase}: secF#secD#rfe=mraY, {[I] COG0688 Phosphatidylserine decarboxylase}: psd -extracellular parasite |Escherichia coli |E |allneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[J] COG0343 Queuine/archaeosine tRNA-ribosyltransferase}: tgt, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -extracellular parasite |Escherichia coli |E |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[H] COG0113 Delta-aminolevulinic acid dehydratase#[H] COG0181 Porphobilinogen deaminase}: hemB#hemC, {[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: phnP -extracellular parasite |Bacillus subtilis |B |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: BS_yabD, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: BS_yutL#BS_dapB#BS_sdhA, {[I] COG0688 Phosphatidylserine decarboxylase}: BS_psd, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: BS_yveS=BS_yycJ -extracellular parasite |Escherichia coli |E |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: dapF#dapB#sdhA=frdA, {[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: phnP -extracellular parasite |Chlamydia trachomatis |I |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: CT594, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: CT430#CT364#CT592, {[I] COG0688 Phosphatidylserine decarboxylase}: CT699, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: CT380=CT738 -extracellular parasite |Methanococcus jannaschii |M |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: MJ1582, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: MJ1119#MJ0422#MJ0033, {[I] COG0688 Phosphatidylserine decarboxylase}: MJ0817, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: MJ1374 -extracellular parasite |Chlamydia pneumoniae |N |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: CPn0787, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: CPn0519#CPn1047#CPn0789, {[I] COG0688 Phosphatidylserine decarboxylase}: CPn0839, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: CPn0879=CPn0479 -extracellular parasite |Methanobacterium thermoautotrophicum |T |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: MTH233, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: MTH1334#MTH800#MTH1502, {[I] COG0688 Phosphatidylserine decarboxylase}: MTH1026, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: MTH751 -extracellular parasite |Rickettsia prowazekii |X |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: RP682, {[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: RP415#RP148#RP128, {[I] COG0688 Phosphatidylserine decarboxylase}: RP241, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: RP869 -extracellular parasite |Escherichia coli |E |allneeded |{[C] COG0039 Malate/lactate dehydrogenases}: mdh, {[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[M] COG0794 Predicted sugar phosphate aminotransferases involved in capsule formation}: gutQ_1=yrbH_1, {[K] COG1475 Predicted transcriptional regulators}: ec1787628 -extracellular parasite |Escherichia coli |E |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[I] COG0439 Biotin carboxylase#[C] COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein}: accC#frdB=sdhB, {[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: phnP -extracellular parasite |Bacillus subtilis |B |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: BS_yabD, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: BS_asd#BS_dapA=BS_ycbC#BS_dapG=BS_lysC=BS_yclM#BS_comGA, {[I] COG0688 Phosphatidylserine decarboxylase}: BS_psd, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: BS_yveS=BS_yycJ -extracellular parasite |Escherichia coli |E |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: usg=asd#dapA=yagE=nanA=yjhH#thrA_1=lysC=metL_1#yheG=hofB=yggR, {[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: phnP -extracellular parasite |Chlamydia trachomatis |I |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: CT594, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: CT363#CT361#CT362#CT571, {[I] COG0688 Phosphatidylserine decarboxylase}: CT699, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: CT380=CT738 -extracellular parasite |Methanococcus jannaschii |M |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: MJ1582, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: MJ0205#MJ0244#MJ0571#MJ0900=MJ1287=MJ0781_1=MJ0781_3=MJ1288, {[I] COG0688 Phosphatidylserine decarboxylase}: MJ0817, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: MJ1374 -extracellular parasite |Chlamydia pneumoniae |N |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: CPn0787, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: CPn1048#CPn1050#CPn1049#CPn0816, {[I] COG0688 Phosphatidylserine decarboxylase}: CPn0839, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: CPn0879=CPn0479 -extracellular parasite |Methanobacterium thermoautotrophicum |T |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: MTH233, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: MTH799#MTH801#MTH802#MTH1702, {[I] COG0688 Phosphatidylserine decarboxylase}: MTH1026, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: MTH751 -extracellular parasite |Rickettsia prowazekii |X |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: RP682, {[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: RP316#RP429#RP753#RP292, {[I] COG0688 Phosphatidylserine decarboxylase}: RP241, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: RP869 -extracellular parasite |Escherichia coli |E |allneeded |{[R] COG0084 Predicted hydrolases of PHP superfamily}: yjjV=yigW=ycfH, {[I] COG0688 Phosphatidylserine decarboxylase}: psd, {[R] COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I}: phnP -extracellular parasite |Escherichia coli |E |oneneeded |{[R] COG1584 Predicted membrane protein}: yaaH -extracellular parasite |Escherichia coli |E |oneneeded |{[R] COG1584 Predicted membrane protein}: yaaH, {[S] COG1806 Uncharacterized BCR, YdiA family}: ydiA -extracellular parasite |Escherichia coli |E |oneneeded |{[O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like#[N] COG2165 General secretion pathway protein G}: ptr#hopG -extracellular parasite |Escherichia coli |E |oneneeded |{[C] COG1017 Haemoglobin-like flavoprotein#[C] COG1069 Ribulose kinase#[P] COG1276 Putative copper export protein#[FH] COG1953 Cytosine/uracil/thiamine/allantoin permeases#[R] COG2130 Putative NADP-dependent oxidoreductases}: hmp_1#araB#ec1788145#ybbW=codB#yncB -extracellular parasite |Escherichia coli |E |oneneeded |{[S] COG1971 Predicted membrane protein}: ec1788124 -extracellular parasite |Escherichia coli |E |oneneeded |{[R] COG1584 Predicted membrane protein}: yaaH -extracellular parasite |Escherichia coli |E |oneneeded |{[O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like#[N] COG2165 General secretion pathway protein G}: ptr#hopG -extracellular parasite |Escherichia coli |E |oneneeded |{[O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like#[N] COG2165 General secretion pathway protein G}: ptr#hopG -extracellular parasite |Escherichia coli |E |oneneeded |{E_nocog}: E_specific -extracellular parasite |Escherichia coli |E |oneneeded |{[C] COG1017 Haemoglobin-like flavoprotein#[C] COG1069 Ribulose kinase#[P] COG1276 Putative copper export protein#[FH] COG1953 Cytosine/uracil/thiamine/allantoin permeases#[R] COG2130 Putative NADP-dependent oxidoreductases}: hmp_1#araB#ec1788145#ybbW=codB#yncB -extracellular parasite |Escherichia coli |E |oneneeded |{[S] COG1729 Uncharacterized BCR#[C] COG2009 Cytochrome b subunit of succinate dehydrogenase#[H] COG2227 2-Octaprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase UbiG/COQ3}: ybgF#sdhC#ubiG -autotrophic |Escherichia coli |E |oneneeded |{[K] COG0782 Transcription elongation factor}: greA=greB=rnk -Gram Stain |Escherichia coli |E |oneneeded |{[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG -Gram Stain |Escherichia coli |E |oneneeded |{[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: kdsB#kdtA#ycaH -Gram Stain |Escherichia coli |E |oneneeded |{[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711, {[T] COG2204 AAA superfamily ATPases with N-terminal receiver domain}: atoC=glnG=hydG=yfhA -heterotrophic |Synechocystis |C |allneeded |{[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: slr1665#sll1058#slr1233, {[G] COG1449 Alpha-amylase/alpha-mannosidase#[O] COG2192 Predicted carbamoyl transferase, NodU family}: slr0337#sll1178 -heterotrophic |Methanococcus jannaschii |M |allneeded |{[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: MJ1119#MJ0422#MJ0033, {[G] COG1449 Alpha-amylase/alpha-mannosidase#[O] COG2192 Predicted carbamoyl transferase, NodU family}: MJ1611#MJ1051=MJ1058 +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[E] COG0339 Zn-dependent oligopeptidases#[R] COG0627 Predicted esterase#[G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase#[S] COG1934 Uncharacterized BCR#[T] COG2198 Two component signal transduction system HPt domain}: dcp=prlC#yaiM=yeiG#yeaD#yhbN#arcB_3=barA_4=evgS_5=torS_3=yojN_2 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[E] COG0834 Periplasmic amino acid binding proteins#[L] COG0847 DNA polymerase III epsilon subunit (3'-5' exonuclease)}: artI=yhdW=artJ=hisJ=argT=fliY=glnH#ec1788149=dnaQ=rnt +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0621 Fe-S oxidoreductases family 1}: yleA=yliG, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: dapF#dapB#sdhA=frdA, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB +facultative aerobe |Haemophilus influenzae |H |allneeded |{[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: HI0750#HI1308#HI0835, {[L] COG1643 HrpA-like helicases}: HI1070 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[K] COG1309 Transcriptional regulators, AcrR family}: acrR=envR=ec1787938=ycdC=betI=gusR=yijC +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0738 Fucose permease#[P] COG0753 Catalase#[H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1#[F] COG1972 Nucleoside permease#[R] COG2249 Putative NADPH-quinone reductase, YabF family (modulator of drug activity B)}: fucP#katE#ygdL#yeiJ=yeiM=nupC#mdaB=yabF=ycaK=yheR, {[P] COG1118 ABC-type sulfate/molybdenum transport system, ATPase component}: cysA=modC=yabJ +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0352 Thiamine monophosphate synthase}: thiE, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[E] COG1921 Selenocysteine synthase [L-seryl-tRNA(Ser) selenium transferase]}: selA +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0346 Lactoylglutathione lyase}: gloA=yaeR, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[P] COG1629 Outer membrane receptor proteins, mostly Fe transport}: cirA=btuB=ec1787723=fhuA=ec1787024=fhuE=fecA +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[C] COG1085 Galactose-1-phosphate uridylyltransferase}: galT +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0215 Cysteinyl-tRNA synthetase#[F] COG0563 Adenylate kinase/yeast uridylate kinase}: cysS#adk, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0058 Glucan phosphorylase}: glgP=malP, {[E] COG1128 ABC-type spermidine/putrescine transport system, ATPase component#[E] COG1176 ABC-type spermidine/putrescine transport system, permease component I#[E] COG1177 ABC-type spermidine/putrescine transport system, permease component II}: potA=potG=ec1787712#potB=potH=ec1787713#potC=potI=ec1787714 +facultative aerobe |Escherichia coli |E |allneeded |{[O] COG0330 Membrane protease subunits, stomatin/prohibitin homologs#[R] COG0628 Predicted permease#[S] COG0668 Uncharacterized ACR, integral membrane protein, YjeP/UPF0003 family}: ybbK=hflC=hflK#perM=ec1787979=ec1787885=yhhT#aefA_2=yjeP_2=yggB=ybiO_2=ec1787591 =ybdG, {[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0194 Guanylate kinase#[L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)}: gmk=phnN#yqgF, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[HC] COG0543 2-Octaprenylphenol hydroxylase and related flavodoxin oxidoreductases}: ubiB +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0281 Malic enzyme}: sfcA=ec1788806_1, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[CR] COG1062 Alcohol dehydrogenase class III and related dehydrogenases}: adhC=yggQ +facultative aerobe |Escherichia coli |E |allneeded |{[MG] COG0451 Nucleoside-diphosphate-sugar epimerases}: yefB=rfaD=ec1787093=ec1788589_2=ec1788327, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[M] COG0449 Glucosamine-fructose-6-phosphate aminotransferase, contains aminotransferase and phosphosugar isomerase domains}: glmS, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0283 Cytidylate kinase#[O] COG1214 Inactive homologs of metal-dependent proteases, putative molecular chaperones}: cmk#yeaZ, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[R] COG0820 Predicted Fe-S-cluster redox enzyme}: yfgB +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1}: fkpA=fklB +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[E] COG0687 Spermidine/putrescine-binding periplasmic protein}: potD=potF=ec1787711 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[L] COG1199 Rad3-related DNA helicases}: dinG=ec1788110 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[C] COG1866 Phosphoenolpyruvate carboxykinase#[HE] COG1932 Phosphoserine aminotransferase#[P] COG2116 Formate/nitrite family of transporters}: pckA#serC#focA=focB=yfdC=nirC +facultative aerobe |Escherichia coli |E |allneeded |{[O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain#[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase#[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase}: hhoA=hhoB=htrA#murE#murD, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0320 Lipoate synthase#[F] COG0590 Cytosine deaminase-related enzymes#[C] COG1294 Cytochrome bd quinol oxidase and cytochrome oxidase complexes, subunit 2}: lipA#yfhC#appB=cydB, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase}: dapD +facultative aerobe |Haemophilus influenzae |H |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: HI1225, {[E] COG2171 Tetrahydrodipicolinate N-succinyltransferase}: HI1634 +facultative aerobe |Escherichia coli |E |allneeded |{[EP] COG0601 Dipeptide/oligopeptide/nickel permeases}: yejB=dppB=sapB=nikB=ec1787053=ec1787761=oppB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0232 dGTP triphosphohydrolase#[H] COG0321 Lipoate-protein ligase B#[J] COG0349 Ribonuclease D#[R] COG0354 Predicted aminomethyltransferase related to GcvT#[C] COG1282 NAD(P)+ transhydrogenase, beta subunit}: dgt#lipB#rnd#ygfZ#pntB, {[R] COG2252 Permeases}: yjcD=ygfR=ygfQ=yicO=yieG +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[L] COG2256 Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase}: ycaJ +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[C] COG1301 Dicarboxylate permease, Na+ or H+ symporter}: gltP=dctA=ygjU +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) PurK#[F] COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN#[R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein#[L] COG1555 DNA uptake protein ComEA and related DNA-binding proteins#[H] COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase#[KT] COG1974 SOS-response transcriptional repressors (LexA homologs, RecA-mediated autopeptidases)}: purK#purN#yceD#ybaV#menA#lexA=umuD=ec1787391, {[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0339 Zn-dependent oligopeptidases#[R] COG0627 Predicted esterase#[G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase#[S] COG1934 Uncharacterized BCR#[T] COG2198 Two component signal transduction system HPt domain}: dcp=prlC#yaiM=yeiG#yeaD#yhbN#arcB_3=barA_4=evgS_5=torS_3=yojN_2, {[E] COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases}: dapE=ygeY=argE=ylbB +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0684 Demethylmenaquinone methyltransferase}: menG, {[M] COG0793 Periplasmic protease}: prc +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[R] COG2137 Uncharacterized protein RecX}: oraA +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[E] COG0620 Methionine synthase II (cobalamin-independent)}: metE +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG1965 Protein implicated in iron transport, frataxin homolog}: cyaY, {[P] COG2217 Cation transport ATPases}: ybaR=yhhO +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components#[G] COG1879 Periplasmic sugar-binding proteins}: araH=mglC=rbsC=xylH=yjcV=yjfF=ytfT#rbsB=ytfQ=xylF=yjcX=yphF=mglB=araF +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0586 Uncharacterized membrane-associated protein, DedA family#[M] COG0796 Glutamate racemase}: dedA=yabI=yghB=yqjA=yohD#murI, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0120 Ribose 5-phosphate isomerase}: rpiA, {[F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase}: hpt +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0294 Dihydropteroate synthase}: folP, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[S] COG0780 Uncharacterized BCR, YkvM family}: yqcD_2 +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[S] COG1496 Uncharacterized ACR, YfiH family}: yfiH +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[P] COG1965 Protein implicated in iron transport, frataxin homolog}: cyaY +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases}: asnS, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0520 Selenocysteine lyase}: ec1787970=ygdJ, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0174 Glutamine synthase#[D] COG0489 ATPases involved in chromosome partitioning, mrp family#[P] COG1226 Eukaryotic-type potassium channels}: ec1787555=glnA#mrp=ec1788374_2=yccC_2#kch=ybaL_2=kefB_2=kefC_2, {[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC +facultative aerobe |Escherichia coli |E |allneeded |{[FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases}: ycfF, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[S] COG2001 Uncharacterized BCR, YllB/UPF0040 family}: yabB +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[E] COG1126 ABC-type polar amino acid transport system, ATPase component#[I] COG1502 Cardiolipin synthase, phoaphatidylserine synthase and related enzymes of the phospholipase D family}: yecS=yhdZ=glnQ=gltL=hisP=artP=phnC#cls=ybhO=ymdC=pssA +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0471 Cation transporters}: ybdS=yfbS=nhaB=ybhI=ygjE=ybiR, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[S] COG1289 Uncharacterized membrane protein, YhfK family#[R] COG2081 Predicted flavoproteins, YhiN family#[EN] COG2091 Yeast alpha-aminoadipate reductase small subunit and related enzymes of siderophore/surfactin biosynthesis#[R] COG2103 Predicted aminotransferase, homolog of eukaryotic glucokinase regulator}: ec1787194=yhfK#yhiN#yhhU#yfeU +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0226 Periplasmic phosphate-binding protein#[P] COG0573 Phosphate permease#[P] COG1117 ABC-type phosphate transport system, ATPase component}: pstS#pstC#pstB, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0076 Glutamate decarboxylase and related PLP-dependent proteins#[H] COG1056 Nicotinamide mononucleotide adenylyltransferase}: gadB=gadA#nadR_2, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon +facultative aerobe |Escherichia coli |E |allneeded |{[O] COG0695 Glutaredoxin and related proteins}: yibM=grxA=nrdH=grxB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[L] COG1381 Recombination protein RecO}: recO +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: fumC#hemH#fabI#yihY=yhjD, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[G] COG1129 ABC-type sugar (aldose) transport system, ATPase component}: mglA=xylG=rbsA=araG=yjcW=ec1787792=yphE +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[S] COG0759 Uncharacterized ACR, YidD family}: yidD +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[M] COG1452 Organic solvent tolerance protein OstA}: imp +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[O] COG0755 Cytochrome c-type biogenesis protein (heme exporter protein C)#[N] COG0805 Sec-independent protein secretion pathway component TatC#[N] COG1826 Component of Sec-independent protein secretion pathway TatA (homolog of Tha4/Hcf106)}: ccmC#yigU#yigT=ybeC +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0019 Diaminopimelate decarboxylase#[E] COG0059 Ketol-acid reductoisomerase (isoleucine biosynthesis)#[EG] COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase#[E] COG0134 Indole-3-glycerol phosphate synthase#[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I#[E] COG0287 Prephenate dehydrogenase#[EH] COG0512 Anthranilate/para-aminobenzoate synthases component II#[E] COG0547 Anthranilate phosphoribosyltransferase#[C] COG0778 Nitroreductase family proteins}: lysA#ilvC#ilvD=yagF=edd=yjhG#trpC_1#trpE=pabB#tyrA_2#pabA=trpD_1#trpD_2#ec178724 3=nfnB=mdaA=ydjA, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[S] COG1426 Uncharacterized proteins, YfgA family}: yfgA +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0345 Pyrroline-5-carboxylate reductase}: proC, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[G] COG1472 Beta-glucosidase-related glycosidases}: ycfO=bglX +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[S] COG1694 Uncharacterized ACR, MazG family}: mazG +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0611 Thiamine monophosphate kinase}: thiL, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0658 Uncharacterized BCR, ComEC family}: ycaI_1, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[N] COG1459 General secretion pathway protein F}: hopF=hofC +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0600 Uncharacterized permeases}: tauC=ycbM, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[T] COG1278 Cold shock proteins#[L] COG1722 Exonuclease VII small subunit#[K] COG1758 RNA polymerase-associated protein RpoZ, omega subunit}: cspC=cspB=cspA=cspG=cspE=cspI=cspF#xseB#rpoZ +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase#[J] COG0539 Ribosomal protein S1#[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase#[H] COG0635 Coproporphyrinogen III oxidase and related FeS oxidoreductases#[M] COG0707 UDP-glucuronosyltransferases#[O] COG0740 Protease subunits of ATP-dependent proteases, ClpP family#[L] COG0742 N6-adenine-specific methylase#[L] COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains#[M] COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase#[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2#[D] COG0772 Bacterial cell division membrane protein FtsW/MrdB/SpoVE#[M] COG0773 UDP-N-acetylmuramate-alanine ligase#[K] COG0781 Transcription termination factor NusB#[S] COG0799 Uncharacterized ACR (homolog of plant Iojap proteins)#[R] COG0802 Predicted nucleotide-binding protein, YjeE family#[M] COG0812 UDP-N-acetylmuramate dehydrogenase#[M] COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes#[J] COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)#[J] COG1186 Protein chain release factor B#[J] COG1187 Predicted pseudouridylate synthase family 1#[LK] COG1197 Transcription-repair coupling factor - helicase of superfamily II#[L] COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase#[O] COG1219 ATP-dependent protease Clp, ATPase subunit ClpX#[R] COG1253 Uncharacterized CBS domain-containing proteins#[J] COG1825 Ribosomal protein L25 (general stress protein Ctc)}: miaA#rpsA#pcnB=cca#hemN=yggW#murG#clpP#yhhF#polA_2#murZ#ftsI=mrdA#ftsW=mrdB#murC =yjfG#nusB#ybeB#yjeE#murB#ddlA=ddlB#pnp#prfB#yjbC=yciL=yejD=ymfC#mfd#priA#clpX#y beX=ytfL=ypjE=yoaE_2=yfjD=yegH_2#rplY, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing#[H] COG0303 Molybdopterin biosynthesis enzyme#[H] COG0314 Molybdopterin converting factor, large subunit#[H] COG0315 Molybdenum cofactor biosynthesis enzyme#[O] COG0501 Predicted Zn-dependent proteases with possible chaperone function, HtpX family#[EP] COG0555 ABC-type cysteine/molybdate transport systems, permease components#[P] COG0725 Molybdenum-binding periplasmic protein#[H] COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A}: bisC=bisZ=fdhF=fdoG=napA=narG=narZ#moeA#moaE#moaC#htpX=yggG=ycaL=ec1788840#cysU= cysW=modB#modA#mob, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[M] COG1792 Rod shape-determining protein MreC}: mreC +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0670 Integral membrane protein YccA, interacts with FtsH}: ybhL=yccA=ybhM, {[H] COG0684 Demethylmenaquinone methyltransferase}: menG +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[K] COG1522 Transcriptional regulators, Lrp family}: asnC=lrp=ybaO +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[R] COG0637 Predicted phosphatase/phosphohexomutase#[J] COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase (trmA)}: yqaB=ycjU=yieH=yfbT#trmA=ygcA=ybjF +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[F] COG0756 dUTPase}: dut +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[S] COG1944 Uncharacterized ACR}: ycaO +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0560 Phosphoserine phosphatase}: serB, {[F] COG0572 Uridine kinase}: udk +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0135 Phosphoribosylanthranilate isomerase}: trpC_2, {[R] COG1248 Uncharacterized proteins with the alpha/beta hydrolase fold#[OT] COG1391 Glutamine synthetase adenylyltransferase GlnE#[I] COG1946 Acyl-CoA thioesterase#[F] COG1949 Oligoribonuclease (3'->5' exoribonuclease)}: yfbB=ybfF#glnE#tesB#yjeR +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[O] COG1495 Disulfide bond formation protein DsbB}: dsbB +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[L] COG1330 Exonuclease V gamma subunit, RecC}: recC +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0606 Predicted ATPases}: yifB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT, {[MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylases involved in lipopolysaccharide biosynthesis/translation and initiation factor eIF2B subunits}: ec1786559 +facultative aerobe |Escherichia coli |E |allneeded |{[K] COG0557 Exoribonucleases}: vacB_1=rnb, {[H] COG0684 Demethylmenaquinone methyltransferase}: menG +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0353 Recombinational DNA repair protein}: recR, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[K] COG1609 Transcriptional regulators of the LacI family}: purR=rbsR=galS=galR=ascG=malI=cytR +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0665 Predicted oxidoreductases}: dadA=ordL, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0208 Ribonucleotide reductase beta subunit}: nrdF=nrdB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[M] COG1210 UDP-glucose pyrophosphorylase}: galU=galF +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0716 Flavodoxins}: fldA=hemG=fldB=ec1789154=mioC, {[R] COG1248 Uncharacterized proteins with the alpha/beta hydrolase fold#[OT] COG1391 Glutamine synthetase adenylyltransferase GlnE#[I] COG1946 Acyl-CoA thioesterase#[F] COG1949 Oligoribonuclease (3'->5' exoribonuclease)}: yfbB=ybfF#glnE#tesB#yjeR +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0061 Predicted kinase#[D] COG0206 Cell division GTPase FtsZ}: yfjB#ftsZ, {[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0218 Predicted GTPases}: yihA, {[H] COG0259 Pyridoxamine phosphate oxidase#[E] COG0308 Aminopeptidase N#[I] COG1133 ABC-type long-chain fatty acid transport system, permease component}: pdxH#pepN#yddA=sbmA +facultative aerobe |Escherichia coli |E |allneeded |{[I] COG0331 (acyl-carrier-protein) S-malonyltransferase}: fabD, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[H] COG0301 Enzyme of thiamine biosynthesis (ThiI); contains a PP-loop superfamily ATPase domain and an uncharacterized conserved domain}: yajK +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[T] COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases}: apaH=pphA=ygbH +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[S] COG0327 Uncharacterized ACR, YbgI/Acr family}: ybgI +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0039 Malate/lactate dehydrogenases}: mdh, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[L] COG1194 A/G-specific DNA glycosylase}: mutY +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[R] COG1040 Predicted amidophosphoribosyltransferases}: yhgH +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[L] COG1570 Exonuclease VII, large subunit}: xseA +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0165 Argininosuccinate lyase}: argH, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0045 Succinyl-CoA synthetase beta chain#[C] COG0074 Succinyl-CoA synthetase, alpha subunit}: sucC#sucD=fdrA=yahF, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0697 Predicted permeases}: yigM=ytfF=yhbE=ydeD=yijE=yicL=yedA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases}: asnS, {[C] COG1347 Na+-translocating NADH-quinone reductase, subunit 5#[C] COG2209 Na+-translocating NADH-quinone oxidoreductase, subunit 5 (NqrE)}: ydgQ#ec1787914 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0488 ATPase components of ABC transporters with duplicated ATPase domains}: ybiT=uup=yjjK=yheS, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[S] COG1509 Uncharacterized ACR, YjeK family (putative lysine 2,3-aminomutase)}: yjeK +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT, {[C] COG1249 Dihydrolipoamide dehydrogenase/glutathione oxidoreductase and related enzymes}: lpd=gor=ykgC=udhA +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0187 DNA gyrase (topoisomerase II) B subunit#[L] COG0188 DNA gyrase (topoisomerase II) A subunit#[J] COG0566 rRNA methylases}: gyrB=parE#gyrA=parC#yjfH=yfiF=spoU, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0117 Pyrimidine deaminase, riboflavin biosynthesis#[H] COG0307 Riboflavin synthase alpha chain#[E] COG0337 3-dehydroquinate synthetase#[E] COG0703 Shikimate kinase#[H] COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase}: ribD_1#ribC#aroB#aroK=aroL#folK, {[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0531 Amino acid transporters}: yjeH=yhfM=yeeF=ycjJ=ybaT=potE=yjdE, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[S] COG0344 Predicted membrane protein, YgiH/UPF0078 family}: ygiH +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[L] COG0350 Methylated DNA-protein cysteine methyltransferase}: ada_2=ogt=ybaZ +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases}: asnS, {[L] COG1943 Predicted transposase}: yafM +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[I] COG1182 Acyl carrier protein phosphodiesterase#[P] COG1393 Arsenate reductase ArsG and related proteins, glutaredoxin family}: acpD#yffB=arsG=ec1788991=ec1788841 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0343 Queuine/archaeosine tRNA-ribosyltransferase}: tgt, {[R] COG1248 Uncharacterized proteins with the alpha/beta hydrolase fold#[OT] COG1391 Glutamine synthetase adenylyltransferase GlnE#[I] COG1946 Acyl-CoA thioesterase#[F] COG1949 Oligoribonuclease (3'->5' exoribonuclease)}: yfbB=ybfF#glnE#tesB#yjeR +facultative aerobe |Escherichia coli |E |allneeded |{[KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family}: hepA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0569 Potassium uptake system NAD-binding component TrkA}: trkA=ec1787440_2, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family#[R] COG0824 Predicted esterase}: ppiB=ppiA#ybgC=ybaW, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0259 Pyridoxamine phosphate oxidase#[E] COG0308 Aminopeptidase N#[I] COG1133 ABC-type long-chain fatty acid transport system, permease component}: pdxH#pepN#yddA=sbmA, {[D] COG1077 HSP70 class molecular chaperones involved in cell morphogenesis}: mreB +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[P] COG1116 ABC-type nitrate transport system, ATPase component}: tauB=ycbE +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[H] COG1072 Panthothenate kinase#[E] COG1168 PLP-dependent aminotransferases, MalY/PatB family#[S] COG1660 Uncharacterized BCR, YhbJ/UPF0042 family#[S] COG1666 Uncharacterized BCR, YajQ family#[R] COG2132 Putative multicopper oxidases#[D] COG2177 Cell division protein FtsX#[K] COG2186 Transcriptional regulators, FadR family#[S] COG2258 Uncharacterized BCR, YiiM family#[S] COG2259 Predicted membrane protein}: coaA=yggC#malY#yhbJ#yajQ#yacK=sufI#ftsX#exuR=uxuR=yhcK=lldR=fadR=glcC=pdhR#yiiM# yqjF=yphA +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0362 6-phosphogluconate dehydrogenase, family 1}: gnd, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0378 Urease/hydrogenase-associated predicted GTPases}: hypB, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: cvpA +facultative aerobe |Haemophilus influenzae |H |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: HI1225, {[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HI1206 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0173 Aspartyl-tRNA synthetase#[H] COG0190 5,10-methylene-tetrahydrofolate dehydrogenase#[J] COG0193 Peptidyl-tRNA hydrolase#[J] COG0203 Ribosomal protein L17#[J] COG0211 Ribosomal protein L27#[J] COG0216 Protein chain release factor A#[S] COG0217 Uncharacterized ACR, YebC family#[J] COG0222 Ribosomal protein L7/L12#[J] COG0223 Methionyl-tRNA formyltransferase#[J] COG0227 Ribosomal protein L28#[J] COG0228 Ribosomal protein S16#[J] COG0230 Ribosomal protein L34#[J] COG0233 Ribosome recycling factor#[O] COG0234 Co-chaperonin GroES (HSP10)#[I] COG0236 Acyl carrier protein#[F] COG0237 Predicted nucleotide kinase#[J] COG0238 Ribosomal protein S18#[J] COG0242 N-formylmethionyl-tRNA deformylase#[J] COG0254 Ribosomal protein L31#[J] COG0257 Ribosomal protein L36#[J] COG0261 Ribosomal protein L21#[J] COG0264 Translation elongation factor Ts#[J] COG0267 Ribosomal protein L33#[J] COG0268 Ribosomal protein S20#[L] COG0272 NAD-dependent DNA ligase (contains BRCT domain type II)#[M] COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis#[J] COG0290 Translation initiation factor IF3#[J] COG0291 Ribosomal protein L35#[J] COG0292 Ribosomal protein L20#[L] COG0305 Replicative DNA helicase#[R] COG0313 Predicted methyltransferases#[S] COG0319 Uncharacterized BCR (putative metal-binding protein)#[J] COG0335 Ribosomal protein L19#[J] COG0336 tRNA-(guanine-N1)-methyltransferase#[J] COG0359 Ribosomal protein L9#[J] COG0360 Ribosomal protein S6#[O] COG0465 ATP-dependent Zn proteases#[N] COG0481 Membrane GTPase LepA#[R] COG0536 Predicted GTPase#[O] COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)#[J] COG0564 Predicted pseudouridylate synthase family 2#[K] COG0568 DNA-dependent RNA polymerase sigma subunits (sigma70/32)#[K] COG0571 dsRNA-specific ribonuclease#[L] COG0587 DNA-dependent DNA polymerase III alpha chain#[L] COG0593 ATPase involved in DNA replication initiation#[L] COG0594 RNase P protein component#[N] COG0597 Lipoprotein signal peptidase#[L] COG0629 Single-stranded DNA-binding protein#[L] COG0632 Holliday junction DNA helicase subunit#[N] COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase)#[M] COG0682 Prolipoprotein diacylglyceryltransferase#[N] COG0690 Preprotein translocase subunit SecE#[O] COG0691 tmRNA-binding protein SmpB#[S] COG0706 Inner membrane proteins, SpoIIIJ family#[L] COG0776 Histone-like DNA-binding protein#[J] COG0858 Ribosome-binding factor A#[R] COG1160 Predicted GTPases#[L] COG2255 Helicase subunit of the Holliday junction resolvase (RuvB)}: aspS#folD#pth#rplQ#rpmA#prfA=prfH=yaeJ#ec1788294=yebC#rplL#fmt=ec1788589_1#rpmB# rpsP#rpmH#frr#groS#acpP#yacE#rpsR#def#rpmE=ykgM#rpmJ#rplU#tsf#rpmG#rpsT#lig=yicF #yabC#infC#rpmI#rplT#dnaB#yraL#ybeY#rplS#trmD#rplI#rpsF#hflB#lepA#yhbZ#tig#yabO= yceC=sfhB=yqcB#rpoD=rpoS=rpoH#rnc#dnaE#dnaA=ec1788842#rnpA#lspA#ssb#ruvA#secA#lg t#secE#smpB#yidC#himA=himD=hupA=hupB#rbfA#ec1788858#ruvB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[R] COG1566 Multidrug resistance efflux pump}: emrK=emrA=yjcR=ec1787932=yhcQ +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0605 Superoxide dismutase}: sodA=sodB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0316 Uncharacterized ACR, HesB/YadR/YfhF family}: yfhF=ydiC=yadR=yhgI_1, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[M] COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases}: rfaJ=rfaI +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0664 cAMP-binding domains - Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases}: crp=fnr=yeiL, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0508 Dihydrolipoamide acyltransferases}: aceF=sucB, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0784 CheY-like receiver domains}: cheY=barA_3=evgS_4=hnr_1=rcsC_3=torS_2=ec1788724_1, {[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[L] COG0692 Uracil DNA glycosylase}: ung +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0251 Putative translation initiation inhibitor#[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases}: yjgF=ec1788111=yhaR=ec1787245=yjgH#metC=metB, {[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0447 Dihydroxynaphthoic acid synthase}: menB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0684 Demethylmenaquinone methyltransferase}: menG, {[L] COG0783 Starvation-inducible DNA-binding protein Dps}: dps +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0295 Cytidine deaminase#[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)}: cdd#fruK=pfkB, {[N] COG0811 Biopolymer transport proteins}: tolQ=exbB +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[M] COG0860 N-acetylmuramoyl-L-alanine amidase}: ygdN=amiB=amiA +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0491 Zn-dependent hydrolases, including glyoxylases}: gloB=ycbL, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0671 Predicted phosphatases}: ybjG=ec1788500=pgpB, {[C] COG1347 Na+-translocating NADH-quinone reductase, subunit 5#[C] COG2209 Na+-translocating NADH-quinone oxidoreductase, subunit 5 (NqrE)}: ydgQ#ec1787914 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[R] COG0728 Uncharacterized membrane protein, putative virulence factor MviN#[M] COG0815 Apolipoprotein N-acyltransferase}: mviN#lnt +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[C] COG0567 Pyruvate and 2-oxoglutarate dehydrogenases, E1 component}: sucA +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family)}: glpF=aqpZ, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[G] COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)}: ec1788726_2=ptsA_1=ptsI=ycgC_2=ptsP_2 +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0266 Formamidopyrimidine-DNA glycosylase}: nei=mutM, {[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase#[F] COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase PurE#[F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain#[F] COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain#[E] COG0065 3-Isopropylmalate dehydratase large subunit#[E] COG0066 3-isopropylmalate dehydratase small subunit#[E] COG0079 Histidinol-phosphate aminotransferase#[E] COG0119 Isopropylmalate/homocitrate/citramalate synthases#[F] COG0150 Phosphoribosylaminoimidazol (AIR) synthetase PurM#[E] COG0160 PLP-dependent aminotransferases#[R] COG0456 Acetyltransferases#[L] COG1082 Predicted endonucleases}: purF#purE#purL_1#purL_2#leuC=ybhJ_1#leuD=ybhJ_2#hisC#mhpF=leuA#purM#argD=goaG=yg jG=cstC=gabT#rimI#ec1787573=yjfW=yiaR=ygbM=gip=yhfP, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[G] COG0448 ADP-glucose pyrophosphorylase#[S] COG1327 Uncharacterized BCR#[G] COG1523 Pullulanase and related glycosidases}: glgC#ybaD#glgX +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0249 MutS-like ATPases involved in mismatch repair, family 2#[L] COG0323 DNA mismatch repair enzyme (predicted ATPase)}: mutS#mutL, {[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[S] COG1434 Uncharacterized ACR}: ydcF=ycbC +facultative aerobe |Escherichia coli |E |allneeded |{[HR] COG0535 Molybdenum cofactor biosynthesis enzyme and related Fe-S oxidoreductases}: moaA, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)#[H] COG1441 O-succinylbenzoate synthase and related enzymes}: purH#dgoA_2=menC=ycjG, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[F] COG0207 Thymidylate synthase}: thyA +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0284 Orotidine-5'-phosphate decarboxylase}: pyrF, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA +facultative aerobe |Escherichia coli |E |allneeded |{[O] COG0694 Thioredoxin-like proteins and domains - NifU family}: yhgI_2, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[J] COG0689 RNase PH}: rph +facultative aerobe |Escherichia coli |E |allneeded |{[HJ] COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)}: rimK=gshB, {[C] COG0567 Pyruvate and 2-oxoglutarate dehydrogenases, E1 component}: sucA +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[M] COG1589 Cell division septal protein FtsQ}: ftsQ +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[E] COG1760 L-serine deaminase#[T] COG1966 Carbon starvation protein CstA, predicted membrane protein#[I] COG2057 Coenzyme A transferases, subunit B#[O] COG2077 Thiol peroxidase}: sdaA=yhaP=sdaB=yhaQ#cstA=yjiY#atoA=ydiF_2#tpx +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[H] COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase}: thiD +facultative aerobe |Escherichia coli |E |allneeded |{[K] COG0425 Predicted transcriptional regulators}: yedF=yeeD=yhhP, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA +facultative aerobe |Escherichia coli |E |allneeded |{[LR] COG0494 NTP pyrophosphohydrolases (MutT family) including oxidative damage repair enzymes}: mutT=rdsA=yzzG=yrfE=ec1788056=ntpA=yjaD, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[C] COG0633 Ferredoxin}: fdx=yfaE +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0144 Predicted rRNA methylase}: yebU=sun, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[R] COG1162 Predicted GTPases}: yjeQ +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0009 Putative translation factor (SUA5)#[J] COG0130 Pseudouridine synthase}: yciO=yrdC#truB, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0218 Predicted GTPases}: yihA, {[G] COG1640 4-alpha-glucanotransferase}: malQ +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0240 Glycerol 3-phosphate dehydrogenase}: gpsA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[R] COG2183 Predicted RNA binding protein, contains S1 domain}: yhgF +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[O] COG1066 Predicted ATP-dependent serine protease (Sms family)}: sms +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[G] COG1312 D-mannonate dehydratase#[KG] COG1349 Transcriptional regulators of sugar metabolism#[K] COG1737 Transcriptional regulators, RpiR family#[G] COG1869 Uncharacterized components of ribose/xylose transport systems#[G] COG2017 Galactose mutarotase and related enzymes#[G] COG2115 Xylose isomerase#[F] COG2233 Xanthine/uracil permeases}: uxuA#glpR=yihW=yjhJ=yhaW=ygbI=fucR=ec1787540#yebK=yjcY=yfeT=yfhH#rbsD=fucU#galM= yihR=yphB#xylA#ycdG=uraA=ygfU=ygfO=yicE=ybbY +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[S] COG1738 Uncharacterized ACR, YhhQ family}: yhhQ +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0191 Fructose/tagatose biphosphate aldolases#[H] COG0192 S-adenosylmethionine synthetase}: gatY=ec1788072=fba=yraC#metK, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0280 Phosphotransacetylase}: pta_2=eutI=ec1788806_2, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[R] COG1090 Predicted nucleoside-diphosphate sugar epimerases (SulA family)#[H] COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase#[HP] COG1169 Isochorismate synthase#[C] COG1252 NADH dehydrogenase, FAD-containing subunit#[G] COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins#[S] COG1929 Uncharacterized BCR#[M] COG1970 Large-conductance mechanosensitive channel MscL#[E] COG1982 Arginine/lysine/ornithine decarboxylases#[M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)#[H] COG2228 o-Succinylbenzoate-CoA synthase}: ec1788642#menD#menF=entC#ndh#glpX=yggF#yhaD=ybbZ#mscL#ldcC=adiA=speF=cadA=speC#d acB#menE +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[G] COG1070 Sugar (pentulose and hexulose) kinases}: ygcE=ydeV=xylB=xylK=fucK=rhaB +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0133 Tryptophan synthase beta chain}: trpB=yedO, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[E] COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (NifS family)}: yfhO +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0232 dGTP triphosphohydrolase#[H] COG0321 Lipoate-protein ligase B#[J] COG0349 Ribonuclease D#[R] COG0354 Predicted aminomethyltransferase related to GcvT#[C] COG1282 NAD(P)+ transhydrogenase, beta subunit}: dgt#lipB#rnd#ygfZ#pntB, {[O] COG0826 Protease related to collagenase}: ydcP=yegQ=yhbU=yhbV +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[O] COG1651 Protein-disulfide isomerases DsbC/DsbG}: dsbG=dsbC +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins}: ydaA=ybdQ=ynaF=uspA=yiiT=yecG, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[M] COG0794 Predicted sugar phosphate aminotransferases involved in capsule formation}: gutQ_1=yrbH_1, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member}: recD +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[K] COG1544 Ribosome-associated protein Y (PSrp-1)}: yhbH=yfiA +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0339 Zn-dependent oligopeptidases#[R] COG0627 Predicted esterase#[G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase#[S] COG1934 Uncharacterized BCR#[T] COG2198 Two component signal transduction system HPt domain}: dcp=prlC#yaiM=yeiG#yeaD#yhbN#arcB_3=barA_4=evgS_5=torS_3=yojN_2, {[O] COG0638 Proteasome protease subunit HslV}: hslV +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases}: asnS, {[R] COG1248 Uncharacterized proteins with the alpha/beta hydrolase fold#[OT] COG1391 Glutamine synthetase adenylyltransferase GlnE#[I] COG1946 Acyl-CoA thioesterase#[F] COG1949 Oligoribonuclease (3'->5' exoribonuclease)}: yfbB=ybfF#glnE#tesB#yjeR +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[E] COG1114 Branched-chain amino acid permeases}: brnQ +facultative aerobe |Escherichia coli |E |allneeded |{[O] COG0225 Peptide methionine sulfoxide reductase#[O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase}: msrA#yeaA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[R] COG0730 Predicted permeases}: yfcA +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0058 Glucan phosphorylase}: glgP=malP, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL, {[C] COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases}: lctD +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases}: araD=fucA=ygbL=yiaS=yjfX=rhaD, {[E] COG0339 Zn-dependent oligopeptidases#[R] COG0627 Predicted esterase#[G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase#[S] COG1934 Uncharacterized BCR#[T] COG2198 Two component signal transduction system HPt domain}: dcp=prlC#yaiM=yeiG#yeaD#yhbN#arcB_3=barA_4=evgS_5=torS_3=yojN_2 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[T] COG1854 LuxS protein involved in autoinducer AI2 synthesis}: ygaG +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[S] COG1444 Uncharacterized ACR}: ypfI +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[H] COG0807 GTP cyclohydrolase II}: ribA +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[S] COG1281 Uncharacterized BCR, YrfI family#[G] COG1638 Dicarboxylate-binding periplasmic protein#[N] COG1989 Signal peptidase HopD, cleaves prepilin-like proteins#[L] COG2003 DNA repair proteins, RadC family#[M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis}: yrfI#yiaO#yghH=hofD#radC=ykfG=yfjY=yeeS#wcaJ +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0684 Demethylmenaquinone methyltransferase}: menG, {[S] COG0762 Predicted integral membrane protein, YggT family}: yggT +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[P] COG0715 Putative taurine-binding periplasmic protein}: tauA=ycbO +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0262 Dihydrofolate reductase}: folA, {[O] COG0298 Hydrogenase expression factor}: hybG=hypC +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[P] COG1120 ABC-type iron (III) transport system, ATPase component}: fepC=fecE=fhuC=btuD +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[C] COG1726 Membrane-bound Fe-S proteins, RfnC family}: ec1787916 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT, {[G] COG1130 ABC-type sugar transport system, ATPase component}: ycjV=malK=ugpC=yagC +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[G] COG1299 Phosphotransferase system, fructose-specific IIC component#[G] COG1445 Phosphotransferase system fructose-specific component IIB#[G] COG2190 Phosphotransferase system IIA components}: fruA_3=hrsA_3=frvB_2=frwC=ec1788729#frwB=frvB_1=frwD=fruA_2=hrsA_2=ec1788730#nag E_3=crr=bglF_3 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[R] COG1127 Uncharacterized ABC-type transport system, ATPase component}: yrbF +facultative aerobe |Escherichia coli |E |allneeded |{[I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase}: plsC=yihG=aas_1, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0232 dGTP triphosphohydrolase#[H] COG0321 Lipoate-protein ligase B#[J] COG0349 Ribonuclease D#[R] COG0354 Predicted aminomethyltransferase related to GcvT#[C] COG1282 NAD(P)+ transhydrogenase, beta subunit}: dgt#lipB#rnd#ygfZ#pntB, {[EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component#[EP] COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component}: dppD=oppD=sapD=ec1787759=nikD#oppF=dppF=ec1787758=sapF=nikE +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[C] COG2055 Malate/L-lactate dehydrogenases}: ylbC=ybiC=yiaK +facultative aerobe |Escherichia coli |E |allneeded |{[EHR] COG0591 Na+/proline, Na+/panthothenate symporters and related permeases}: putP=yidK=panF=yjcG, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[C] COG1882 Pyruvate-formate lyase#[R] COG2005 N-terminal domain of molybdenum-binding protein ModE}: pflD=pflB=yhaS=ybiW=yfiD#modE +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[E] COG1115 Sodium-alanine symporters}: yaaJ +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0608 Single-stranded DNA-specific exonuclease}: recJ, {[R] COG1248 Uncharacterized proteins with the alpha/beta hydrolase fold#[OT] COG1391 Glutamine synthetase adenylyltransferase GlnE#[I] COG1946 Acyl-CoA thioesterase#[F] COG1949 Oligoribonuclease (3'->5' exoribonuclease)}: yfbB=ybfF#glnE#tesB#yjeR +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0021 Transketolase#[G] COG0036 Pentose-5-phosphate-3-epimerase}: tktA=tktB#yhfD=yjcU=yjhK, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[K] COG1940 Transcriptional regulators of NagC/XylR family}: mlc=yjcT=yajF=ycfX=nagC=yhcI=yphH +facultative aerobe |Escherichia coli |E |allneeded |{[M] COG0770 UDP-N-acetylmuramyl pentapeptide synthase}: murF, {[S] COG1444 Uncharacterized ACR}: ypfI +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[S] COG1984 Uncharacterized ACR#[S] COG2049 Uncharacterized ACR}: ybgK#ybgJ +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0140 Phosphoribosyl-ATP pyrophosphohydrolase}: hisI_2, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[R] COG1178 Uncharacterized transport system, permease component#[H] COG1840 Thiamine-binding periplasmic proteins}: yabK#tbpA +facultative aerobe |Escherichia coli |E |allneeded |{[M] COG0463 Glycosyltransferases involved in cell wall biogenesis}: ec1788588=ec1788692=yaiP=yibD=wcaA=wcaE, {[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0684 Demethylmenaquinone methyltransferase}: menG, {[J] COG0828 Ribosomal protein S21}: rpsU +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[L] COG0863 Adenine-specific DNA methylase}: yhdJ +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0285 Folylpolyglutamate synthase}: folC, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0312 Predicted Zn-dependent proteases and their inactivated homologs}: yhdO=pmbA, {[G] COG0738 Fucose permease#[P] COG0753 Catalase#[H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1#[F] COG1972 Nucleoside permease#[R] COG2249 Putative NADPH-quinone reductase, YabF family (modulator of drug activity B)}: fucP#katE#ygdL#yeiJ=yeiM=nupC#mdaB=yabF=ycaK=yheR +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[J] COG1098 Ribosomal protein S1 domains}: vacB_2 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[P] COG0803 Zn-binding (lipo)protein of the ABC-type Zn transport system (surface adhesin A)}: yebL +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0339 Zn-dependent oligopeptidases#[R] COG0627 Predicted esterase#[G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase#[S] COG1934 Uncharacterized BCR#[T] COG2198 Two component signal transduction system HPt domain}: dcp=prlC#yaiM=yeiG#yeaD#yhbN#arcB_3=barA_4=evgS_5=torS_3=yojN_2, {[I] COG0688 Phosphatidylserine decarboxylase}: psd +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0219 Predicted rRNA methylase (SpoU class)}: yibK, {[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[G] COG1489 Sugar fermentation stimulation protein (uncharacterized)}: sfsA +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[H] COG0262 Dihydrofolate reductase}: folA +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[N] COG1292 Choline-glycine betaine transporter}: betT=yeaV=caiT +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[E] COG1171 Threonine dehydratase#[S] COG1959 Uncharacterized BCR, YjeB/RRF2 family}: ilvA=tdcB=ygeX#ec1788880=yjeB +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[S] COG1561 Uncharacterized stress-induced protein, YicC family}: yicC +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[F] COG0813 Purine-nucleoside (and uridine) phosphorylase}: deoD=udp +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0518 GMP synthase - Glutamine amidotransferase domain#[F] COG0519 GMP synthase - PP-ATPase domain}: guaA_1#guaA_2, {[P] COG1965 Protein implicated in iron transport, frataxin homolog}: cyaY +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[R] COG1923 Uncharacterized ACR, host factor I protein Hfq}: hfq +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[L] COG0817 Holliday junction endodeoxyribonuclease RuvC}: ruvC +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[M] COG1087 UDP-glucose 4-epimerase}: galE +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[R] COG1534 Predicted RNA-binding protein containing KH domain#[H] COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein MobB}: yhbY#yihC +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[S] COG1767 Uncharacterized proteins, CitG homologs}: citG +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[K] COG0782 Transcription elongation factor}: greA=greB=rnk +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0168 Potassium uptake system component TrkG}: trkG=trkH, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0282 Acetate kinase#[M] COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division#[R] COG1159 GTPases, the Era family}: ackA=yhaA#gidB#era, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0057 Glyceraldehyde-3-phosphate dehydrogenase#[G] COG0126 3-phosphoglycerate kinase#[G] COG0148 Enolase#[G] COG0149 Triosephosphate isomerase}: gapA=gapC=gapB#pgk#eno#tpiA, {[P] COG1965 Protein implicated in iron transport, frataxin homolog}: cyaY +facultative aerobe |Escherichia coli |E |allneeded |{[I] COG0304 3-oxoacyl-(acyl-carrier-protein) synthase I}: fabB=fabF, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase#[M] COG1519 3-Deoxy-D-manno-octulosonic-acid transferase (LPS biosynthesis)#[N] COG1663 Lipid A biosynthesis protein LpxK, tetraacyldisaccharide-1-P 4'-kinase}: kdsB#kdtA#ycaH +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[I] COG1607 Acyl-CoA hydrolase}: yciA +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0232 dGTP triphosphohydrolase#[H] COG0321 Lipoate-protein ligase B#[J] COG0349 Ribonuclease D#[R] COG0354 Predicted aminomethyltransferase related to GcvT#[C] COG1282 NAD(P)+ transhydrogenase, beta subunit}: dgt#lipB#rnd#ygfZ#pntB, {[L] COG0551 Zn-finger domain associated with topoisomerase type I}: topA_2=yrdD +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[C] COG1526 Uncharacterized protein FdhD/NarQ required for formate dehydrogenase activity}: fdhD +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[M] COG0791 Cell wall-associated hydrolases (invasion-associated proteins)#[H] COG1539 Dihydroneopterin aldolase}: spr=yafL=ydhO=nlpC#ygiG=folX +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[H] COG2145 Hydroxyethylthiazole kinase ThiM, sugar kinase family}: thiM +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[C] COG0712 FoF1-type ATP synthase delta subunit}: atpH +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[M] COG1088 dTDP-D-glucose 4,6-dehydratase}: rfbB=rffG +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[C] COG0437 Fe-S-cluster-containing hydrogenase components 1}: hybA=nrfC=fdnH=fdoH=dmsB=ec1787872=ec1787960 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[R] COG1132 ABC-type multidrug/protein/lipid transport system, ATPase component}: mdlB=cydD=yojI=mdlA=msbA=cydC +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0567 Pyruvate and 2-oxoglutarate dehydrogenases, E1 component}: sucA, {[R] COG0641 Arylsulfatase regulator (Fe-S oxidoreductase)}: aslB=ec1787774 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0612 Predicted Zn-dependent peptidases}: yhjJ=yddC, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase}: ilvE=pabC, {[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[E] COG1605 Chorismate mutase}: pheA_1=tyrA_1 +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[S] COG1593 Integral membrane protein, possible transporter}: yiaN +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[H] COG0720 6-pyruvoyl-tetrahydropterin synthase}: ygcM +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[F] COG0634 Hypoxanthine-guanine phosphoribosyltransferase}: hpt +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2}: thiF=moeB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[G] COG0738 Fucose permease#[P] COG0753 Catalase#[H] COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1#[F] COG1972 Nucleoside permease#[R] COG2249 Putative NADPH-quinone reductase, YabF family (modulator of drug activity B)}: fucP#katE#ygdL#yeiJ=yeiM=nupC#mdaB=yabF=ycaK=yheR +facultative aerobe |Escherichia coli |E |allneeded |{[K] COG0583 Transcriptional regulators, LysR family}: leuO=metR=ybhD=yfiE=yahB=yneJ=ynfL, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0483 Inositol phosphatase family proteins}: suhB, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0684 Demethylmenaquinone methyltransferase}: menG, {[EM] COG0722 DAHP synthase/3-Deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase#[J] COG0751 Glycyl-tRNA synthetase, beta subunit#[J] COG0752 Glycyl-tRNA synthetase, alpha subunit#[I] COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases}: kdsA=aroG=aroH=aroF#glyS#glyQ#fabA=fabZ +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0159 Tryptophan synthase alpha chain}: trpA, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[R] COG1073 Hydrolases of the alpha/beta superfamily}: pldB=ec1788884=ec1787678 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[F] COG0295 Cytidine deaminase#[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)}: cdd#fruK=pfkB +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0496 Survival protein SurE, predicted acid phosphatase}: surE, {[H] COG1072 Panthothenate kinase#[E] COG1168 PLP-dependent aminotransferases, MalY/PatB family#[S] COG1660 Uncharacterized BCR, YhbJ/UPF0042 family#[S] COG1666 Uncharacterized BCR, YajQ family#[R] COG2132 Putative multicopper oxidases#[D] COG2177 Cell division protein FtsX#[K] COG2186 Transcriptional regulators, FadR family#[S] COG2258 Uncharacterized BCR, YiiM family#[S] COG2259 Predicted membrane protein}: coaA=yggC#malY#yhbJ#yajQ#yacK=sufI#ftsX#exuR=uxuR=yhcK=lldR=fadR=glcC=pdhR#yiiM# yqjF=yphA +facultative aerobe |Escherichia coli |E |allneeded |{[FE] COG0462 Phosphoribosylpyrophosphate synthetase#[R] COG0534 Probable cation efflux pump (multidrug resistance protein)}: prsA#ydhE=yeeO=dinF, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0328 Ribonuclease HI#[L] COG0497 ATPases involved in DNA repair}: rnhA#recN, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0614 Ferrichrome-binding periplasmic proteins}: fecB=fepB=yadT=fhuD, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[O] COG1220 ATP-dependent protease HslUV, ATPase subunit HslU/ClpY}: hslU +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) PurK#[F] COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN#[R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein#[L] COG1555 DNA uptake protein ComEA and related DNA-binding proteins#[H] COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase#[KT] COG1974 SOS-response transcriptional repressors (LexA homologs, RecA-mediated autopeptidases)}: purK#purN#yceD#ybaV#menA#lexA=umuD=ec1787391, {[O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2}: yaaD=slyD +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0262 Dihydrofolate reductase}: folA, {[L] COG0338 Site-specific DNA methylase dam}: dam +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0503 Adenine/guanine phosphoribosyltransferases}: apt=gpt, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[G] COG1803 Methylglyoxal synthase}: yccG +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[H] COG0684 Demethylmenaquinone methyltransferase}: menG +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[CHR] COG1052 Lactate dehydrogenase and related dehydrogenases}: pdxB=ycdW=yiaE=ldhA +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0153 Galactokinase}: galK, {[L] COG0610 Restriction enzymes type I helicase subunits and related helicases}: hsdR +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[T] COG1734 DnaK suppressor protein DskA}: dksA +facultative aerobe |Escherichia coli |E |allneeded |{[EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]#[E] COG0040 ATP phosphoribosyltransferase (histidine biosynthesis)#[E] COG0077 Prephenate dehydratase#[E] COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase#[E] COG0107 Imidazoleglycerol-phosphate synthase#[E] COG0118 Glutamine amidotransferase (HisH)#[E] COG0131 Imidazoleglycerol-phosphate dehydratase#[E] COG0137 Argininosuccinate synthase#[E] COG0139 Phosphoribosyl-AMP cyclohydrolase#[E] COG0141 Histidinol dehydrogenase#[E] COG0347 Nitrogen regulatory protein PII#[E] COG0440 Acetolactate synthase, small subunit}: gcl=ilvB=ilvG=ilvI=poxB=ec1788716#hisG#pheA_2#hisA#hisF#hisH#hisB_2#argG#hisI_1# hisD#glnK=glnB#ilvH=ilvN=ilvM, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[I] COG1211 4-diphosphocytidyl-2-methylerithritol synthase}: ygbP +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: fumC#hemH#fabI#yihY=yhjD, {[F] COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase NrdD}: nrdD +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases}: asnS, {[N] COG1560 Lauroyl/myristoyl acyltransferase involved in lipid A biosynthesis}: htrB=ddg=msbB +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0598 Mg and Co transporters}: corA=ec1787604, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0176 Transaldolase}: mipB=talA=talC=talB, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[N] COG1450 General secretion pathway protein D#[S] COG1805 Uncharacterized membrane protein, RnfD family}: yheF=hopQ#ydgO +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[L] COG1195 ATPases involved in DNA repair}: recF +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[M] COG0739 Membrane proteins related to metalloendopeptidases#[M] COG0744 Membrane carboxypeptidase (penicillin-binding protein)#[S] COG0779 Uncharacterized BCR, YhbC family#[J] COG0806 RimM protein, required for 16S rRNA processing#[LK] COG1200 RecG-like helicases#[S] COG1385 Uncharacterized BCR}: yebA=nlpD=ygeR=yibP#mrcA=pbpC=mrcB=yrbM#yhbC#yfjA#recG#yggJ +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0581 Phosphate permease component of ATP-dependent phosphate uptake system}: pstA=phnE, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[P] COG0306 Phosphate permease}: pitA=pitB +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[E] COG1438 Arginine repressor}: argR +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[C] COG1271 Cytochrome bd quinol oxidase, subunit 1}: cydA=appC +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0054 Riboflavin synthase beta-chain#[E] COG0082 Chorismate synthase#[H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase#[E] COG0128 5-enolpyruvylshikimate-3-phosphate synthase#[E] COG0169 Shikimate 5-dehydrogenase#[H] COG1985 Pyrimidine reductase, riboflavin biosynthesis}: ribE#aroC#ribB#aroA#aroE=ydiB#ribD_2, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0348 Polyferredoxin}: yccM=yejZ, {[C] COG0567 Pyruvate and 2-oxoglutarate dehydrogenases, E1 component}: sucA +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[I] COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase (terpenoid biosynthesis)#[M] COG0761 Penicillin tolerance protein LytB#[M] COG0821 Essential bacterial protein GcpE, involved in density-dependent regulation of peptidoglycan biosynthesis}: yaeM#lytB#gcpE +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[R] COG1473 Metal-dependent amidohydrolases/aminoacylases}: ydaJ=ec1787598 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[C] COG1620 L-lactate permease}: yghK=lldP +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[L] COG0514 Superfamily II DNA helicases, RecQ family}: recQ +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0684 Demethylmenaquinone methyltransferase}: menG, {[G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase}: eda=dgoA_1 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[K] COG0789 Predicted transcriptional regulators}: ycgE=yehV=yhdM=ybbI=soxR +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0607 Rhodanese-related sulfurtransferases}: pspE=yibN=ec1788054=ybbB=ygaP=sseA=glpE, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0260 Leucyl aminopeptidase}: yfhI=pepA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance)}: ec1789038 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[I] COG2031 Short chain fatty acids transporter}: atoE +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) PurK#[F] COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN#[R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein#[L] COG1555 DNA uptake protein ComEA and related DNA-binding proteins#[H] COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase#[KT] COG1974 SOS-response transcriptional repressors (LexA homologs, RecA-mediated autopeptidases)}: purK#purN#yceD#ybaV#menA#lexA=umuD=ec1787391, {[S] COG2215 Predicted membrane protein}: yohM +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0610 Restriction enzymes type I helicase subunits and related helicases}: hsdR, {[J] COG1530 Ribonucleases G and E}: cafA=rne +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0363 Glucosamine-6-phosphate deaminase (Glucosamine-6-phosphate isomerase)#[G] COG0364 Glucose-6-phosphate 1-dehydrogenase#[F] COG0775 Nucleoside phosphorylase}: nagB=yieK=yraG#zwf#pfs=amn, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[C] COG1145 Ferredoxin 2}: yojG=yojB=ec1787915=yfhL +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: fumC#hemH#fabI#yihY=yhjD, {[P] COG1553 Uncharacterized ACR involved in intracellular sulfur reduction}: ychN=yheN +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0708 Exonuclease III}: xthA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0015 Adenylosuccinate lyase#[F] COG0104 Adenylosuccinate synthase#[E] COG0111 Phosphoglycerate dehydrogenase#[F] COG0151 Phosphoribosylamine-glycine ligase#[H] COG0157 Nicotinate-nucleotide pyrophosphorylase#[F] COG0167 Dihydroorotate dehydrogenase#[E] COG0460 Homoserine dehydrogenase#[E] COG0498 Threonine synthase#[G] COG0524 Sugar kinases, ribokinase family}: purB#purA#serA#purD#nadC#yeiA_1=pyrD#thrA_2=metL_2#thrC#rbsK=yhfQ=yihV=ec1788071 =ec1788417=yeiC=kdgK, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB +facultative aerobe |Escherichia coli |E |allneeded |{[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III}: fabH, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0221 Inorganic pyrophosphatase}: ppa, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: usg=asd#dapA=yagE=nanA=yjhH#thrA_1=lysC=metL_1#yheG=hofB=yggR, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB +facultative aerobe |Haemophilus influenzae |H |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: HI0646=HI1433#HI0142=HI0255#HI1632=HI0089_1#HI0298, {[L] COG1643 HrpA-like helicases}: HI1070 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0277 FAD/FMN-containing dehydrogenases}: ydiJ_1=yghM=dld=yghL_1=ygcU=ygcT, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0578 Anaerobic glycerol-3-phosphate dehydrogenase}: glpA=glpD, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO +facultative aerobe |Escherichia coli |E |allneeded |{[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon, {[S] COG0857 Uncharacterized N-terminal domain of phosphotransacetylases#[T] COG2062 Phosphohistidine phosphatase SixA}: pta_1#ec1788681 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[N] COG1952 Preprotein translocase subunit SecB}: secB +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[E] COG0685 5,10-methylenetetrahydrofolate reductase}: metF +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotranferase}: bioA, {[E] COG0549 Carbamate kinase}: yahI=yqeA=ybcF +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0567 Pyruvate and 2-oxoglutarate dehydrogenases, E1 component}: sucA, {[R] COG0613 Predicted metal-dependent phosphoesterases (PHP family)}: yciV +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0288 Carbonic anhydrase}: cynT=yadF, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0196 FAD synthase#[R] COG0245 Putative enzyme of deoxyxylulose pathway (terpenoid biosynthesis), YgbB family#[J] COG1190 Lysyl-tRNA synthetases}: yaaC#ygbB#lysU=lysS=yjeA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[I] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II}: ydiD=caiC=fadD=aas_2 +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0249 MutS-like ATPases involved in mismatch repair, family 2#[L] COG0323 DNA mismatch repair enzyme (predicted ATPase)}: mutS#mutL, {[L] COG0732 Restriction endonuclease S subunits}: hsdS +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[S] COG1346 Predicted membrane protein, YohK family#[S] COG1380 Predicted membrane protein, YohJ family#[R] COG1540 Uncharacterized proteins, homologs of lactam utilization protein B}: yohK#yohJ#ybgL +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0247 Fe-S oxidoreductases}: glpC=ykgE=yghL_2=ydiJ_2, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[H] COG1477 Membrane-associated lipoprotein ApbE involved in thiamine biosynthesis}: yojL +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0452 Flavoprotein involved in panthothenate metabolism}: dfp, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0684 Demethylmenaquinone methyltransferase}: menG, {[J] COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)#[P] COG0841 Cation efflux system protein}: queA#ybdE=acrB=acrF=acrD=yhiV=yegO=yegN +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase#[E] COG0436 PLP-dependent aminotransferases#[I] COG0511 Biotin carboxyl carrier protein of acetyl-CoA carboxylase#[L] COG0582 Integrase#[N] COG0616 Periplasmic serine proteases}: birA_2#ec1788722=ybdL=avtA=ec1788627#accB#xerC=fimB=fimE=xerD=int=yfdB=ec1787861 #sppA=sohB, {[H] COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase}: pdxK=pdxY +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[S] COG1280 Conserved membrane proteins, YahN/YigJ family}: yeaS=yigK=yahN +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[M] COG0763 Lipid A disaccharide synthetase#[M] COG0774 UDP-3-0-acyl-N-acetylglucosamine deacetylase#[N] COG0848 Biopolymer transport protein ExbD#[M] COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase#[M] COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase}: lpxB#lpxC#exbD=tolR#lpxA#lpxD +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[M] COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (GlmU); Contains nucleotidyltransferase and I-patch acetyltransferase domains}: glmU +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0302 GTP cyclohydrolase I#[C] COG0686 NAD/NADP transhydrogenase alpha subunit#[P] COG0861 Membrane protein TerC, possibly involved in tellurium resistance#[N] COG1217 Membrane GTPase}: folE#pntA#ygjT=ygdQ=yegH_1=yoaE_1#yihK, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0717 Deoxycytidine deaminase}: dcd, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[R] COG0300 Short-chain dehydrogenases of various substrate specificities#[F] COG0788 Formyltetrahydrofolate hydrolase}: ydfG#purU +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[M] COG0818 Diacylglycerol kinase#[J] COG2264 Ribosomal protein L11 methylase}: dgkA#prmA +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0461 Orotate phosphoribosyltransferase}: pyrE, {[L] COG1643 HrpA-like helicases}: hrpA=hrpB +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0457 TPR-repeat-containing proteins}: yhjL=nrfG=ec1788947=yhbM, {[R] COG1248 Uncharacterized proteins with the alpha/beta hydrolase fold#[OT] COG1391 Glutamine synthetase adenylyltransferase GlnE#[I] COG1946 Acyl-CoA thioesterase#[F] COG1949 Oligoribonuclease (3'->5' exoribonuclease)}: yfbB=ybfF#glnE#tesB#yjeR +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0114 Fumarase#[H] COG0276 Protoheme ferro-lyase (ferrochelatase)#[I] COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH)#[J] COG1295 tRNA-processing ribonuclease BN}: fumC#hemH#fabI#yihY=yhjD, {[S] COG1720 Uncharacterized ACR, YaeB/UPF0066 family}: yaeB +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[L] COG1074 ATP-dependent exoDNAse (exonuclease V), beta subunit, - helicase and exonuclease domains#[N] COG1314 Membrane protein SecG involved in protein secretion#[D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins}: recB#secG#ftsK +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[S] COG1947 Uncharacterized ACR, YchB/YabH family}: ychB +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[PH] COG0609 Iron, hemin, cobalamine permeases}: btuC=fepG=fhuB=fecC=fepD=fecD +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[K] COG1158 Transcription termination factor rho#[N] COG1360 Flagellar motor protein MotB and related proteins, PAL/OmpA family}: rho#yiaD=pal=motB=mbhA=ompA=yfiB +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[J] COG1841 Ribosomal protein L30/L7E}: rpmD +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0241 Histidinol phosphatase and related phosphatases#[G] COG0279 Phosphoheptose isomerase}: yaeD=hisB_1#gmhA=yraO, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[I] COG0183 Acetyl-CoA acetyltransferases}: ec1787663=fadA=atoB=ec1788683=yqeF, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[I] COG0439 Biotin carboxylase#[C] COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein}: accC#frdB=sdhB, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[T] COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing)}: csrA +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0482 Predicted ATPase of the PP-family#[S] COG0718 Uncharacterized BCR, YbaB family}: ycfB#ybaB, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[L] COG0610 Restriction enzymes type I helicase subunits and related helicases}: hsdR +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[L] COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase}: yraN +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[E] COG0814 Amino acid permeases}: sdaC=tnaB=tyrP=yhaO=yqeG=yhjV=mtr +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0132 Dethiobiotin synthetase}: bioD=ec1787877, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[R] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)}: fabG=yohF=yjgI=yohE=srlD=yciK=yfeF +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[S] COG1288 Uncharacterized membrane protein#[R] COG1823 Predicted Na+-dicarboxylate symporter#[E] COG2195 Di- and tripeptidases}: yfcC#ec1788024#pepD=pepT +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[E] COG0747 Dipeptide/oligopeptide/nickel ABC-type transport systems, periplasmic components}: oppA=sapA=ybaE=dppA=ec1787590=ec1787762=ec1787052 +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0516 IMP dehydrogenase/GMP reductase}: guaB_1=guaB_3=guaC, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[I] COG1788 Acyl-CoA:acetate CoA transferase alpha subunit}: atoD=ydiF_1 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[P] COG1108 ABC-type Mn/Zn transport systems, ATPase component#[P] COG1121 ABC-type iron (III) transport system, ATPase component}: yebI#yebM +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[M] COG0797 Lipoproteins}: rlpA +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0669 Phosphopantetheine adenylyltransferase#[N] COG0758 Protein involved in DNA uptake}: kdtB#smf, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0078 Ornithine carbamoyltransferase}: argI=argF=ygeW, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[K] COG1595 Specialized sigma subunits of RNA polymerase}: rpoE=fecI +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[G] COG0296 1,4-alpha-glucan branching enzyme}: glgB +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[M] COG1686 D-alanyl-D-alanine carboxypeptidase}: dacC=yeeC=dacA=pbpG +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0259 Pyridoxamine phosphate oxidase#[E] COG0308 Aminopeptidase N#[I] COG1133 ABC-type long-chain fatty acid transport system, permease component}: pdxH#pepN#yddA=sbmA, {[I] COG1267 Phosphatidylglycerophosphatase A}: pgpA +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase#[E] COG0473 Isopropylmalate dehydrogenase}: purC#yeaU=leuB, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0015 Adenylosuccinate lyase#[F] COG0104 Adenylosuccinate synthase#[E] COG0111 Phosphoglycerate dehydrogenase#[F] COG0151 Phosphoribosylamine-glycine ligase#[H] COG0157 Nicotinate-nucleotide pyrophosphorylase#[F] COG0167 Dihydroorotate dehydrogenase#[E] COG0460 Homoserine dehydrogenase#[E] COG0498 Threonine synthase#[G] COG0524 Sugar kinases, ribokinase family}: purB#purA#serA#purD#nadC#yeiA_1=pyrD#thrA_2=metL_2#thrC#rbsK=yhfQ=yihV=ec1788071 =ec1788417=yeiC=kdgK, {[S] COG1322 Uncharacterized BCR, YigN family}: yigN +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[R] COG1092 Predicted SAM-dependent methyltransferases}: ec1787201=ycbY_2 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0205 6-phosphofructokinase}: pfkA, {[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO +facultative aerobe |Escherichia coli |E |allneeded |{[S] COG0585 Uncharacterized ACR, YgbO/UPF0024 family}: ygbO, {[S] COG1285 Uncharacterized membrane protein, SapB family}: yhiD +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[EP] COG1173 Dipeptide/oligopeptide/nickel ABC-type transport systems, permease components}: dppC=oppC=nikC=sapC=yejE=ec1787054=ec1787760 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[DR] COG1135 Uncharacterized ABC-type transport system ATPase component/cell division protein FtsE}: abc=ftsE +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[R] COG2050 Uncharacterized protein PaaI, possibly involved in aromatic compounds catabolism}: ec1787662=ybdB=ec1787976=yigI +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0127 Xanthosine triphosphate pyrophosphatase, HAM1/YggV family}: yggV, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0684 Demethylmenaquinone methyltransferase}: menG, {[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins#[O] COG0760 Parvulin-like peptidyl-prolyl isomerase#[R] COG0845 Membrane permeases, predicted cation efflux pumps#[D] COG0849 Predicted ATPases of the HSP70 class involved in cell division}: mltE=slt=dniR_1=mltC=yfhD_2=ygeJ#surA=ppiC=ybaU#ec1788389=ec1787104=acrA=acrE=yh iU=ylcD=yhiI#ftsA +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0218 Predicted GTPases}: yihA, {[P] COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase#[R] COG2166 SufE protein probably involved in Fe-S center assembly}: cysQ#ygdK=ynhA +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0083 Homoserine kinase#[D] COG0239 Integral membrane protein possibly involved in chromosome condensation}: thrB#ybeI, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0588 Phosphoglycerate mutase 1}: gpmA, {[O] COG0602 Organic radical activating enzymes#[R] COG0603 Predicted ATPase (PP-loop superfamily), confers aluminum resistance}: ygcF=nrdG#ybaX +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[S] COG1463 Predicted membrane protein}: yrbD +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0561 Predicted hydrolases of the HAD superfamily}: ybhA=yidA=ec1787043=cof=ec1787067=yigLa, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[C] COG0584 Glycerophosphoryl diester phosphodiesterase}: ugpQ=glpQ +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0339 Zn-dependent oligopeptidases#[R] COG0627 Predicted esterase#[G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase#[S] COG1934 Uncharacterized BCR#[T] COG2198 Two component signal transduction system HPt domain}: dcp=prlC#yaiM=yeiG#yeaD#yhbN#arcB_3=barA_4=evgS_5=torS_3=yojN_2, {[C] COG0822 NifU homologs involved in Fe-S cluster formation}: ec1788878 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases}: asnS, {[S] COG1678 Uncharacterized ACR}: yqgE +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[F] COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases}: ushA=cpdB +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0334 Glutamate dehydrogenase/leucine dehydrogenase#[I] COG0777 Acetyl-CoA carboxylase beta subunit#[I] COG0825 Acetyl-CoA carboxylase alpha subunit}: gdhA#accD#accA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[TK] COG2197 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain}: criR=evgA=fimZ=narL=uhpA=uvrY=narP +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[G] COG1820 N-acetylglucosamine-6-phosphate deacetylase}: nagA=agaA +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0333 Ribosomal protein L32#[D] COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division#[R] COG0486 Predicted GTPases, ThdF family}: rpmF#gidA#thdF, {[H] COG0684 Demethylmenaquinone methyltransferase}: menG +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0502 Biotin synthase and related enzymes}: bioB, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[F] COG1435 Thymidine kinase}: tdk +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[O] COG1180 Pyruvate-formate lyase-activating enzyme}: pflA=pflC=yjjW=ybiY +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0209 Ribonucleotide reductase alpha subunit}: nrdA=nrdE, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[LKJ] COG0513 Superfamily II DNA and RNA helicases}: srmB=rhlB=dbpA=deaD=rhlE=yfjK, {[C] COG1347 Na+-translocating NADH-quinone reductase, subunit 5#[C] COG2209 Na+-translocating NADH-quinone oxidoreductase, subunit 5 (NqrE)}: ydgQ#ec1787914 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0121 Predicted glutamine amidotransferase}: yafJ, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain}: arcA=baeR=basR=cpxR=creB=kdpE=ompR +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[P] COG1275 Tellurite resistance protein and related permeases}: tehA +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0297 Glycogen synthase}: glgA, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[K] COG1414 Transcriptional regulators, IclR family#[S] COG1490 Uncharacterized ACR}: ec1788131=yagI=iclR=yiaJ=yjhI=ybbU=mhpR#yihZ +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0207 Thymidylate synthase}: thyA, {[M] COG0729 Predicted outer membrane protein#[R] COG0795 Predicted permeases#[R] COG1137 ABC-type (unclassified) transport system, ATPase component}: yaeT=ytfM#yjgP=yjgQ#yhbG +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0232 dGTP triphosphohydrolase#[H] COG0321 Lipoate-protein ligase B#[J] COG0349 Ribonuclease D#[R] COG0354 Predicted aminomethyltransferase related to GcvT#[C] COG1282 NAD(P)+ transhydrogenase, beta subunit}: dgt#lipB#rnd#ygfZ#pntB, {[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV +facultative aerobe |Escherichia coli |E |allneeded |{[FP] COG0248 Exopolyphosphatase}: gppA=ppx, {[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0035 Uracil phosphoribosyltransferase#[F] COG0274 Deoxyribose-phosphate aldolase}: upp#deoC, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[M] COG1464 Lipoprotein, attached to the cytoplasmic membrane#[R] COG2011 Permease component of an uncharacterized ABC transporter}: yaeC=nlpA#yaeE +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[P] COG0735 Ferric uptake regulation protein}: fur=yjbK +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[S] COG1739 Uncharacterized ACR, YigZ/UPF0029 family}: yigZ +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[N] COG1388 LysM-repeat proteins and domains}: dniR_2 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0166 Glucose-6-phosphate isomerase}: pgi, {[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[EPGR] COG1101 ATPase components of various transport systems}: ec1788053=phnK=ybbL +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[I] COG2084 3-hydroxyisobutyrate dehydrogenase and related proteins}: yhaE=ybbQ=ygbJ=yihU +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0156 Biotin biosynthesis protein BioF and related aminotransferases}: bioF=kbl, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[TK] COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases}: spoT=relA, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[H] COG1977 Molybdopterin converting factor, small subunit}: moaD +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)#[G] COG1925 Phosphotransferase system, HPr-related proteins}: ptsN=hrsA_1=frvA=ptxA=fruB_1=mtlA_2=frvR_2#fruB_2=ptsH=ycgC_1=ptsO=ec1788726_1 +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0232 dGTP triphosphohydrolase#[H] COG0321 Lipoate-protein ligase B#[J] COG0349 Ribonuclease D#[R] COG0354 Predicted aminomethyltransferase related to GcvT#[C] COG1282 NAD(P)+ transhydrogenase, beta subunit}: dgt#lipB#rnd#ygfZ#pntB, {[R] COG0615 Predicted cytidylyltransferases}: ec1789432_2 +facultative aerobe |Escherichia coli |E |allneeded |{[M] COG0438 Glycosyltransferases I}: rfaG=wcaL=yefI=rfaB=yefD=wcaC, {[E] COG1448 Aspartate/aromatic aminotransferase}: tyrB=aspC +facultative aerobe |Escherichia coli |E |allneeded |{[P] COG0475 K efflux system, membrane domain}: ybaL_1=kefB_1=kefC_1, {[O] COG1068 ATP-dependent unnamed protease}: ec1787188 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0116 Predicted N6-adenine-specific DNA methylases}: ycbY_1, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[S] COG1559 Uncharacterized BCR, YceG family}: yceG +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[R] COG1409 Predicted phosphohydrolases, Icc family}: icc +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[O] COG0466 ATP-dependent Lon protease, bacterial type}: lon +facultative aerobe |Escherichia coli |E |allneeded |{[O] COG1138 Cytochrome c biogenesis factors, CcmF family}: yejR=nrfE, {[HI] COG1154 Deoxyxylulose-5-phosphate synthase}: dxs +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0014 Gamma-glutamyl phosphate reductase (proline biosynthesis)#[E] COG0263 Glutamate 5-kinase}: proA#proB, {[R] COG2194 Predicted membrane-associated, metal-dependent hydrolase}: ybiP=yhbX=yijP=yhjW=yjdB +facultative aerobe |Escherichia coli |E |allneeded |{[H] COG0262 Dihydrofolate reductase}: folA, {[J] COG0565 rRNA methylase}: lasT=ec1788881 +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[E] COG1410 Methionine synthase I, cobalamin-binding domain}: metH_2 +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0269 3-hexulose-6-phosphate synthase and related proteins}: yiaQ=yjfV, {[S] COG0767 Uncharacterized BCR (predicted membrane protein), YrbE family}: yrbE +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid)}: glpG, {[R] COG0790 TPR repeat proteins}: ybeQ=yjcO=ybeT +facultative aerobe |Escherichia coli |E |allneeded |{[F] COG0295 Cytidine deaminase#[G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB)}: cdd#fruK=pfkB, {[N] COG0823 Periplasmic component of the Tol biopolymer transport system}: tolB +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0249 MutS-like ATPases involved in mismatch repair, family 2#[L] COG0323 DNA mismatch repair enzyme (predicted ATPase)}: mutS#mutL, {[E] COG0560 Phosphoserine phosphatase}: serB +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0031 Cysteine synthase/cystathionine beta-synthase#[R] COG0325 Predicted enzyme with a TIM-barrel fold#[E] COG1045 Serine acetyltransferase#[O] COG1225 Peroxiredoxins}: cysK=cysM#yggS#cysE#bcp, {[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0546 Predicted phosphatases}: yniC=yhfE, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[I] COG0558 Phosphatidylglycerophosphate synthase}: pgsA=ec1788055=ec1787676, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[R] COG0220 Predicted S-adenosylmethionine-dependent methyltransferase}: yggH, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0055 FoF1-type ATP synthase beta subunit#[C] COG0056 FoF1-type ATP synthase alpha subunit#[C] COG0224 FoF1-type ATP synthase gamma subunit#[C] COG0355 FoF1-type ATP synthase epsilon subunit#[C] COG0356 FoF1-type ATP synthase a subunit#[C] COG0711 FoF1-type ATP synthase B subunit}: atpD#atpA#atpG#atpC#atpB#atpF, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[O] COG0326 Molecular chaperone, HSP90 family#[M] COG0787 Alanine racemase}: htpG#alr=dadX, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[E] COG1027 Aspartate ammonia-lyase#[J] COG1188 Predicted small RNA-binding protein (S4 paralog)#[M] COG1368 Phosphoglycerol transferase MdoB and related proteins, alkaline phosphatase superfamily#[S] COG1576 Uncharacterized ACR}: aspA#yrfH#mdoB#ybeA +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0469 Pyruvate kinase}: pykF=pykA=ec1788578=yhaF, {[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +facultative aerobe |Escherichia coli |E |allneeded |{[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045, {[E] COG0765 Amino acid ABC transporter permease component}: artM=artQ=hisQ=yecC=glnP=hisM=yhdX +facultative aerobe |Escherichia coli |E |allneeded |{[G] COG0158 Fructose-1,6-biphosphatase#[E] COG0754 Glutathionylspermidine synthase#[E] COG0786 Glutamate permease#[M] COG0859 ADP-heptose:LPS heptosyltransferase}: fbp#gsp_2=ygiC=yjfC#gltS#rfaF=rfaC=rfaQ=ec1788290, {[ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases}: tdh=yjjN=gatD=ybdR=rspB=ec1788075=ydjJ +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0017 Aspartyl/asparaginyl-tRNA synthetases}: asnS, {[D] COG2184 Fic protein involved in cell division}: fic +facultative aerobe |Escherichia coli |E |allneeded |{[T] COG0271 Stress-induced morphogen BolA (activity unknown)#[O] COG0278 Glutaredoxin-related proteins#[O] COG0625 Glutathione-S-transferases#[O] COG1076 DnaJ-domain-containing proteins 1}: bolA=yrbA#ydhD#yghU=yfcG=gst=yliJ=ec1787726=sspA#yabH=yfhE, {[P] COG1528 Ferritin-like protein Rsg}: rsgA=yecI +facultative aerobe |Escherichia coli |E |allneeded |{[C] COG0554 Glycerol kinase}: glpK, {[E] COG0709 Selenophosphate synthase#[S] COG1238 Uncharacterized membrane protein}: selD#ec1789045 +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[O] COG1221 NtrC family transcriptional regulators, ATPase domain}: pspF=ygeV_2=hyfR_2=prpR_2=fhlA_2=ygaA_2=tyrR_2 +facultative aerobe |Escherichia coli |E |allneeded |{[D] COG0293 Methyltranferase FtsJ involved in cell division}: ftsJ, {[K] COG2207 AraC-type DNA-binding domain-containing proteins}: araC=xylR_2=yijO=ec1787987=marA=yqhC=ec1788725 +facultative aerobe |Escherichia coli |E |allneeded |{[L] COG0270 Site-specific DNA methylase dcm}: dcm, {[G] COG0588 Phosphoglycerate mutase 1}: gpmA +facultative aerobe |Escherichia coli |E |allneeded |{[J] COG0023 Translation initiation factor (SUI1)}: yciH, {[S] COG1862 Uncharacterized secreted proteins, YajC family}: yajC +facultative aerobe |Escherichia coli |E |oneneeded |{E_nocog}: E_specific +Non-halophile |Escherichia coli |E |allneeded |{[C] COG0240 Glycerol 3-phosphate dehydrogenase}: gpsA, {[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[R] COG0546 Predicted phosphatases}: yniC=yhfE +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0178 Excinuclease ATPase subunit#[L] COG0210 Superfamily I DNA and RNA helicases#[L] COG0322 Nuclease subunit of the excinuclease complex#[O] COG0443 Molecular chaperones (HSP70/DnaK family)#[O] COG0484 Molecular chaperones, DnaJ family (contain C-terminal Zn finger domain)#[O] COG0542 ATPases with chaperone activity, ATP-binding domain#[L] COG0556 Helicase subunit of the DNA excision repair complex#[O] COG0576 Molecular chaperone GrpE (heat shock protein)}: uvrA#uvrD=helD=rep#uvrC=ec1788037#dnaK=hscA=eutJ=ybeW=yegD#dnaJ#clpA=clpB#uvrB#g rpE, {[E] COG0560 Phosphoserine phosphatase}: serB +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[E] COG0747 Dipeptide/oligopeptide/nickel ABC-type transport systems, periplasmic components}: oppA=sapA=ybaE=dppA=ec1787590=ec1787762=ec1787052 +Non-halophile |Escherichia coli |E |allneeded |{[C] COG0221 Inorganic pyrophosphatase}: ppa, {[P] COG1528 Ferritin-like protein Rsg}: rsgA=yecI +Non-halophile |Escherichia coli |E |allneeded |{[R] COG0378 Urease/hydrogenase-associated predicted GTPases}: hypB, {[L] COG1194 A/G-specific DNA glycosylase}: mutY +Non-halophile |Escherichia coli |E |allneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[E] COG0560 Phosphoserine phosphatase}: serB +Non-halophile |Escherichia coli |E |allneeded |{[C] COG0221 Inorganic pyrophosphatase}: ppa, {[E] COG1605 Chorismate mutase}: pheA_1=tyrA_1 +Non-halophile |Escherichia coli |E |allneeded |{[O] COG0225 Peptide methionine sulfoxide reductase#[O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase}: msrA#yeaA, {[E] COG0560 Phosphoserine phosphatase}: serB +Non-halophile |Escherichia coli |E |allneeded |{[R] COG0606 Predicted ATPases}: yifB, {[I] COG0688 Phosphatidylserine decarboxylase}: psd +Non-halophile |Escherichia coli |E |allneeded |{[H] COG0212 5-formyltetrahydrofolate cyclo-ligase}: ygfA, {[P] COG1528 Ferritin-like protein Rsg}: rsgA=yecI +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[LR] COG0494 NTP pyrophosphohydrolases (MutT family) including oxidative damage repair enzymes}: mutT=rdsA=yzzG=yrfE=ec1788056=ntpA=yjaD +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[O] COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family#[R] COG0824 Predicted esterase}: ppiB=ppiA#ybgC=ybaW +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[P] COG0288 Carbonic anhydrase}: cynT=yadF +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[L] COG0708 Exonuclease III}: xthA +Non-halophile |Escherichia coli |E |allneeded |{[M] COG1210 UDP-glucose pyrophosphorylase}: galU=galF, {[P] COG1528 Ferritin-like protein Rsg}: rsgA=yecI +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[EP] COG1173 Dipeptide/oligopeptide/nickel ABC-type transport systems, permease components}: dppC=oppC=nikC=sapC=yejE=ec1787054=ec1787760 +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[P] COG0605 Superoxide dismutase}: sodA=sodB +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[H] COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2}: thiF=moeB +Non-halophile |Escherichia coli |E |allneeded |{[E] COG0252 L-asparaginase#[H] COG0521 Molybdopterin biosynthesis enzymes}: ansB=ansA#moaB=mog, {[R] COG0606 Predicted ATPases}: yifB +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[E] COG0345 Pyrroline-5-carboxylate reductase}: proC +Non-halophile |Escherichia coli |E |allneeded |{[O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain#[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase#[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase}: hhoA=hhoB=htrA#murE#murD, {[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM +Non-halophile |Escherichia coli |E |allneeded |{[O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain#[M] COG0769 UDP-N-acetylmuramyl tripeptide synthase#[M] COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase}: hhoA=hhoB=htrA#murE#murD, {[L] COG0732 Restriction endonuclease S subunits}: hsdS +Non-halophile |Escherichia coli |E |allneeded |{[R] COG0671 Predicted phosphatases}: ybjG=ec1788500=pgpB, {[P] COG1528 Ferritin-like protein Rsg}: rsgA=yecI +Non-halophile |Escherichia coli |E |allneeded |{[E] COG0520 Selenocysteine lyase}: ec1787970=ygdJ, {[E] COG0560 Phosphoserine phosphatase}: serB +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[L] COG1194 A/G-specific DNA glycosylase}: mutY +Non-halophile |Escherichia coli |E |allneeded |{[L] COG0286 Type I restriction-modification system methyltransferase subunit}: hsdM, {[EPGR] COG1101 ATPase components of various transport systems}: ec1788053=phnK=ybbL +Non-halophile |Escherichia coli |E |oneneeded |{[R] COG1584 Predicted membrane protein}: yaaH, {[D] COG2184 Fic protein involved in cell division}: fic +Non-halophile |Escherichia coli |E |oneneeded |{[D] COG2184 Fic protein involved in cell division}: fic +Non-halophile |Escherichia coli |E |oneneeded |{[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL, {[L] COG1715 Mrr restriction endonuclease#[G] COG1877 Trehalose-6-phosphatase}: mrr#otsB +Non-halophile |Escherichia coli |E |oneneeded |{[M] COG0810 Periplasmic protein TonB, links inner and outer membranes#[R] COG1778 Uncharacterized proteins of HAD superfamily, CMP-Neu5Ac homologs#[I] COG2067 Long-chain fatty acid transport protein FadL}: tonB#yrbI#fadL +Non-halophile |Escherichia coli |E |oneneeded |{[I] COG2134 CDP-diacylglycerol pyrophosphatase}: cdh +Non-halophile |Escherichia coli |E |oneneeded |{[P] COG1858 Cytochrome c peroxidase#[C] COG1969 Ni/Fe hydrogenase cytochrome b subunit}: yhjA#hyaC -Antibiotic Production |Escherichia coli |E |oneneeded |{[O] COG1025 Secreted/periplasmic Zn-dependent peptidases, insulinase-like#[N] COG2165 General secretion pathway protein G}: ptr#hopG -Antibiotic Production |Escherichia coli |E |oneneeded |{[L] COG1715 Mrr restriction endonuclease#[G] COG1877 Trehalose-6-phosphatase}: mrr#otsB +biphasic development |Chlamydia trachomatis |I |allneeded |{[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: CT430#CT364#CT592, {[R] COG1026 Predicted Zn-dependent peptidases, insulinase-like#[S] COG1747 Uncharacterized BCR, N-terminal domain of the transcription elongation factor GreA (in T. pallidum, a separate protein).}: CT824#CT636_1 +biphasic development |Chlamydia pneumoniae |N |allneeded |{[E] COG0253 Diaminopimelate epimerase#[E] COG0289 Dihydrodipicolinate reductase#[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunits}: CPn0519#CPn1047#CPn0789, {[R] COG1026 Predicted Zn-dependent peptidases, insulinase-like#[S] COG1747 Uncharacterized BCR, N-terminal domain of the transcription elongation factor GreA (in T. pallidum, a separate protein).}: CPn0981#CPn0741_1 +biphasic development |Chlamydia trachomatis |I |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: CT363#CT361#CT362#CT571, {[R] COG1026 Predicted Zn-dependent peptidases, insulinase-like#[S] COG1747 Uncharacterized BCR, N-terminal domain of the transcription elongation factor GreA (in T. pallidum, a separate protein).}: CT824#CT636_1 +biphasic development |Chlamydia pneumoniae |N |allneeded |{[E] COG0136 Aspartate-semialdehyde dehydrogenase#[EM] COG0329 Dihydrodipicolinate synthetase/N-acetylneuraminate lyase#[E] COG0527 Aspartokinases#[N] COG0630 Predicted ATPases involved in pili biogenesis}: CPn1048#CPn1050#CPn1049#CPn0816, {[R] COG1026 Predicted Zn-dependent peptidases, insulinase-like#[S] COG1747 Uncharacterized BCR, N-terminal domain of the transcription elongation factor GreA (in T. pallidum, a separate protein).}: CPn0981#CPn0741_1 +microaerophilic |Treponema pallidum |L |allneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: TP0522, {[S] COG1351 Uncharacterized ACR, THY1 family}: TP1007 +microaerophilic |Borrelia burgdorferi |O |allneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BB0766, {[S] COG1351 Uncharacterized ACR, THY1 family}: BBA76 +microaerophilic |Helicobacter pylori |U |allneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HP0181, {[S] COG1351 Uncharacterized ACR, THY1 family}: HP1533 +microaerophilic |Rickettsia prowazekii |X |allneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: RP033, {[S] COG1351 Uncharacterized ACR, THY1 family}: RP301 +Spiral |Treponema pallidum |L |allneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: TP0522, {[R] COG1579 Zn-ribbon protein, possibly nucleic acid-binding}: TP0494 +Spiral |Borrelia burgdorferi |O |allneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: BB0766, {[R] COG1579 Zn-ribbon protein, possibly nucleic acid-binding}: BB0713 +Spiral |Helicobacter pylori |U |allneeded |{[S] COG1286 Uncharacterized membrane protein, required for colicin V production}: HP0181, {[R] COG1579 Zn-ribbon protein, possibly nucleic acid-binding}: HP0958