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A

AceJet - package AceJet
 
Action - class Jet.Pat.Action.
The representation of an action as part of a when statement in a pattern collection.
Action() - Constructor for class Jet.Pat.Action
 
ActiveEdge - class Jet.Parser.ActiveEdge.
the representation of an active edge (incompletely matched production) as used by the top-down active chart parser.
ActiveEdge(Object, Vector, ParseTreeNode[], int, int) - Constructor for class Jet.Parser.ActiveEdge
 
ActiveLearner - class Jet.HMM.ActiveLearner.
 
ActiveLearner() - Constructor for class Jet.HMM.ActiveLearner
 
ActiveLearnerTool - class Jet.HMM.ActiveLearnerTool.
 
ActiveLearnerTool() - Constructor for class Jet.HMM.ActiveLearnerTool
 
AddFeaturesAction - class Jet.Pat.AddFeaturesAction.
the action (in a when statement) for adding features to an existing Annotation.
AddFeaturesAction(FeatureSet, Variable) - Constructor for class Jet.Pat.AddFeaturesAction
 
AddFeaturesAction(StreamTokenizer) - Constructor for class Jet.Pat.AddFeaturesAction
creates an AddFeaturesAction from the input processed by StreamTokenizer tok, which should have the form
addfeatures [type feature=value feature=value ...] to annotationVariable
AddSyntacticRelations - class Jet.Parser.AddSyntacticRelations.
takes a Penn Tree Bank tree and adds links corresponding to various syntactic relations used by coreference.
AddSyntacticRelations() - Constructor for class Jet.Parser.AddSyntacticRelations
 
Annotation - class Jet.Tipster.Annotation.
An Annotation assigns a type and a set of features to a portion of a Document.
Annotation(String, Span, FeatureSet) - Constructor for class Jet.Tipster.Annotation
 
AnnotationColor - class Jet.Tipster.AnnotationColor.
provides a mechanism for associating particular highlighting colors with particular annotation types in Document displays.
AnnotationColor(String) - Constructor for class Jet.Tipster.AnnotationColor
initializes the colorFrame -- the menu which is used to choose colors for each annotation type.
AnnotationColor(String, String) - Constructor for class Jet.Tipster.AnnotationColor
initializes the colorFrame -- the menu which is used to choose colors for each annotation type.
AnnotationPatternElement - class Jet.Pat.AnnotationPatternElement.
A pattern element which matches an annotation.
AnnotationPatternElement(String, FeatureSet) - Constructor for class Jet.Pat.AnnotationPatternElement
creates an AnnotationPatternElement which matches an Annotation with type type and features fs.
AnnotationPatternElement(String, FeatureSet, Variable) - Constructor for class Jet.Pat.AnnotationPatternElement
creates an AnnotationPatternElement which matches an Annotation with type type and features fs and, if the match is successful, binds variable v to the annotation.
AnnotationTool - class Jet.Tipster.AnnotationTool.
a tool for manually adding annotations to a Document.
AnnotationTool() - Constructor for class Jet.Tipster.AnnotationTool
Creates a new AnnotationTool.
AssignmentPatternElement - class Jet.Pat.AssignmentPatternElement.
a pattern element which assigns a value (a String or integer) to a pattern variable.
AssignmentPatternElement(Variable, String) - Constructor for class Jet.Pat.AssignmentPatternElement
 
AssignmentPatternElement(Variable, Integer) - Constructor for class Jet.Pat.AssignmentPatternElement
 
AtomicPatternElement - class Jet.Pat.AtomicPatternElement.
abstract class for all PatternElements which do not contain embedded references to other PatternElements.
AtomicPatternElement() - Constructor for class Jet.Pat.AtomicPatternElement
 
accept(File) - Method in class Jet.Concepts.ConcreteFileFilter
 
actionPerformed(ActionEvent) - Method in class Jet.Concepts.ConceptHierarchyWindow
called to handle menu actions.
actionPerformed(ActionEvent) - Method in class Jet.Console
 
actionPerformed(ActionEvent) - Method in class Jet.Pat.PatternGraphView
 
actionPerformed(ActionEvent) - Method in class Jet.Pat.PatternView
 
actionPerformed(ActionEvent) - Method in class Jet.Scorer.SGMLScorerWindow
called to handle menu actions.
actions - Variable in class Jet.Pat.FinalPatternNode
 
actions() - Method in class Jet.Pat.PatternRule
 
addAllowedFeatureValue(String) - Method in class Jet.HMM.HMMstate
allow tokens for which feature tokenType == s to be emitted by this state.
addAnnotation(Annotation) - Method in class Jet.Tipster.Document
Adds an annotation to the document.
addAppliedPattern(String) - Method in class Jet.Pat.PatternView
 
addArc(HMMarc) - Method in class Jet.HMM.HMMstate
add arc arc to the set of arcs leaving this state.
addArc(String) - Method in class Jet.HMM.HMMstate
add an arc to the state named arcName to the set of arcs leaving this state.
addConcept(Concept) - Method in class Jet.Concepts.Concept
Adds a new Concept to this Concept.
addConcept(Concept, Concept) - Method in class Jet.Concepts.ConceptHierarchy
Adds a new Concept to this ConceptHierarchy as a child of the node parent.
addDefinition(FeatureSet) - Method in class Jet.Lex.LexicalEntry
adds fs as an additional definition for this lexical entry
addEntry(String[], FeatureSet) - Static method in class Jet.Lex.Lexicon
adds fs to the lexicon as a definition of words
addLine(Point, Point) - Method in class Jet.Tipster.View.JTextPaneX
add a line from 'start' to 'end', color BLUE.
addLine(Point, Point, Color) - Method in class Jet.Tipster.View.JTextPaneX
add a line from 'start' to 'end', color 'clr'.
addMatchedPattern(String) - Method in class Jet.Pat.PatternView
 
addRule(PatternRule) - Method in class Jet.Pat.PatternSet
adds a rule to a PatternSet
addState(HMMstate) - Method in class Jet.HMM.HMM
add state state to the HMM.
addTreeModelListener(TreeModelListener) - Method in class Jet.Parser.ParseTreeModel
 
addType(String) - Static method in class Jet.Tipster.AnnotationColor
add a color entry for annotation type 'type'.
addType(char, Annotation) - Method in class Jet.Tipster.AnnotationTool
specifies that pressing key 'key' will cause an Annotation with type and features specified by 'annotationPrototype' to be added to the document over the selected text.
addWord(Word) - Method in class Jet.Concepts.Concept
Adds a new Word to this Concept.
addWord(Word, Concept) - Method in class Jet.Concepts.ConceptHierarchy
Adds a new Word to this ConceptHierarchy as a child of the node parent.
All the Words of Concept parent are listed before all the Concepts that isa parent.
allTags - Static variable in class Jet.Scorer.SGMLProcessor
if true, all tags will be converted to Annotations.
allowedToken(Annotation) - Method in class Jet.HMM.HMMstate
returns true if token token can be emitted by this state.
ann - Variable in class Jet.Parser.ParseTreeNode
for leaf nodes, the (token or constit) annotation matched by this node.
annotate(Document, Span, String) - Method in class Jet.HMM.HMMTagger
tag 'span' of 'doc' according to the Penn Tree Bank tag set.
annotate(Document) - Method in class Jet.HMM.HMMannotator
use the HMM to add annotations to Document 'doc'.
annotate(Document, Span) - Static method in class Jet.Parser.AddSyntacticRelations
annotate the constituents of document 'doc' within Span 'span'.
annotate(String, Span, FeatureSet) - Method in class Jet.Tipster.Document
Creates an annotation and adds it to the document.
annotateDocument(Document, Span) - Method in class Jet.Tipster.AnnotationTool
display annotation tool with Document 'doc', allowing user to add annotations within Span 'annotationZone' of the document.
annotateSpan(Document, Span) - Method in class Jet.HMM.HMMannotator
use the HMM to add annotations to Span 'textSpan' of Document 'doc'.
annotateWithDefinitions(Document, int) - Static method in class Jet.Lex.Lexicon
annotateWithDefinitions looks for the longest defined lexical item consisting of the tokens starting at position posn; if such an item is found, then for each definition of this item, an annotation of type constit is added to the item, with the item's definition as its attributes.
annotateWithDefinitions(Document, int, int) - Static method in class Jet.Lex.Lexicon
 
annotateWithTag(String, int, int) - Method in class Jet.Tipster.Document
annotateWithTag annotates document with Span of text between <tag> and </tag>.
annotateWithTag(String) - Method in class Jet.Tipster.Document
annotateWithTag annotates document with Span of text between <tag> and </tag>.
annotationsAt(int) - Method in class Jet.Tipster.Document
Returns the annotations beginning at character position start.
annotationsAt(int, String) - Method in class Jet.Tipster.Document
Returns the annotations of type type beginning at character position start.
annotationsOfType(String) - Method in class Jet.Tipster.Document
Returns a vector of all annotations of type type.
annotationsOfType(String, Span) - Method in class Jet.Tipster.Document
Returns a vector of all annotations of type type whose span is contained within span.
annotator - Variable in class Jet.HMM.HMMNameTagger
 
append(String) - Method in class Jet.Tipster.Document
Adds the text stg to the end of the document.
append(char) - Method in class Jet.Tipster.Document
Adds the char c to the end of the document.
apply(Object) - Method in class Jet.Pat.FeatureTest
returns true if this FeatureTest is satisfied by value.
apply(String, Document) - Method in class Jet.Pat.PatternCollection
applies the rules in the named PatternSet to the document.
apply(String, Document, Span) - Method in class Jet.Pat.PatternCollection
applies the rules in the named PatternSet to the specified span.
apply(Document) - Method in class Jet.Pat.PatternSet
applies the rules in the PatternSet to the entire document.
apply(Document, Span) - Method in class Jet.Pat.PatternSet
 
applyScript(Document, Span, String) - Static method in class Jet.Control
apply script script to span span of document doc.
applySubmenu() - Static method in class Jet.Pat.PatternApplication
Returns the "Pattern Apply Trace" submenu used in the Console's "Patterns" menu.
arcs - Variable in class Jet.Pat.InternalPatternNode
the arcs leaving this node.
assignId() - Method in class Jet.Tipster.Annotation
if the Annotation does not already have an 'id' feature, assigns an 'id' feature whose value is the unique (to the Document) identifier obtained by Document.getNextAnnotationId().
attributes() - Method in class Jet.Tipster.Annotation
 

B

BIOWriter - class Jet.HMM.BIOWriter.
converts an XML-annotated named entity file (with the tag ENAMEX) into a BIO-format file.
BIOWriter() - Constructor for class Jet.HMM.BIOWriter
 
BUPARSE - Static variable in class Jet.Parser.Parsers
a constant indicating that the bottom-up parser, BUParse, should be used to analyze the text
BUParse(Document, int, int, Grammar) - Static method in class Jet.Parser.Parsers
apply a bottom-up ('immediate constituent') parser to characters posn to end of Document using grammar gram.
BasicHMMemitter - class Jet.HMM.BasicHMMemitter.
a simple HMMemitter, with statistics based only on exact match to a token in the training corpus.
BasicHMMemitter() - Constructor for class Jet.HMM.BasicHMMemitter
 
BigramHMMemitter - class Jet.HMM.BigramHMMemitter.
an HMMemitter, using statistics for exact token match (including case), for token match (ignoring case), for token bigrams (ignoring case) and for word 'shape'.
BigramHMMemitter() - Constructor for class Jet.HMM.BigramHMMemitter
 
batchFlag - Static variable in class Jet.JetTest
true to run in 'batch' mode, with no console display window
bestActions - Variable in class Jet.Pat.PatternApplication
the sequence of actions associated with the best pattern match found so far.
bestBindings - Variable in class Jet.Pat.PatternApplication
the bindings of variables to values associated with the best pattern match found so far.
bestPatternName - Variable in class Jet.Pat.PatternApplication
the name of the best pattern match found so far.
bestPosition - Variable in class Jet.Pat.PatternApplication
if a match has been found, the document position matching the end of the pattern.
bleach(String) - Method in class Jet.Tipster.View
removes attributes from all the text associated with annotations of type type.
breadthFirstEnumerationOfConcepts() - Method in class Jet.Concepts.Concept
Creates and returns an enumeration of the Concepts in the subtree rooted at this node in breadth-first order.
breadthFirstEnumerationOfWords() - Method in class Jet.Concepts.Concept
Creates and returns an enumeration of the Words in the subtree rooted at this node in breadth-first order.
buildEntitiesFromLinkedMentions(Document) - Static method in class Jet.Refres.CorefEval
 
buildEntitiesFromMentions(Document) - Static method in class Jet.Refres.CorefEval
buildEntitiesFromMentions takes a Document with annotations of the form
mention entity=entity-ID
where coreferential entities share the same entity-ID, and generates annotations of the form
entity mentions=Vector(mentions)
buildMentionsFromEntities(Document) - Static method in class Jet.Refres.CorefEval
buildMentionsFromEntities takes a Document with coreference information in the form of mention attributes on entities and generates Annotations of the form
mention entity=entity-ID
over the heads of mentions, where coreferential mentions are linked by having the same entity-ID.

C

CHARTPARSE - Static variable in class Jet.Parser.Parsers
a constant indicating that the top-down active chart parser, chartParse, should be used to analyze the text
CollectionAnnotationTool - class Jet.Tipster.CollectionAnnotationTool.
a tool for displaying a collection and allowing the AnnotationTool to be invoked on documents in the collection.
CollectionAnnotationTool(String, String) - Constructor for class Jet.Tipster.CollectionAnnotationTool
create a tool to annotated documents from collection 'collectionFile', using the tag set (with colors and key bindings) specified by 'colorFile'.
CollectionView - class Jet.Tipster.CollectionView.
display of a DocumentCollection, with buttons to select views of individual Documents.
CollectionView(DocumentCollection) - Constructor for class Jet.Tipster.CollectionView
create a viewer for Collection 'col'.
Concept - class Jet.Concepts.Concept.
A Concept is basically a DefaultMutableTreeNode.
Concept(Object) - Constructor for class Jet.Concepts.Concept
Creates a tree node with no children and parent, initialized with the name conceptName and that allows children.
ConceptHierarchy - class Jet.Concepts.ConceptHierarchy.
A ConceptHierarchy is an extended JTree.
ConceptHierarchy() - Constructor for class Jet.Concepts.ConceptHierarchy
Creates a ConceptHierarchy with only the default root UNIVERSE.
ConceptHierarchy(File) - Constructor for class Jet.Concepts.ConceptHierarchy
Creates a ConceptHierarchy from the file fileName.
ConceptHierarchyWindow - class Jet.Concepts.ConceptHierarchyWindow.
ConceptHierarchyWindow is a UI that uses the ConceptHierarchy.
ConceptHierarchyWindow(ConceptHierarchy, File) - Constructor for class Jet.Concepts.ConceptHierarchyWindow
 
ConcreteFileFilter - class Jet.Concepts.ConcreteFileFilter.
 
ConcreteFileFilter(String, String) - Constructor for class Jet.Concepts.ConcreteFileFilter
 
Console - class Jet.Console.
console (main window) for interactive use of JET.
Console() - Constructor for class Jet.Console
 
Control - class Jet.Control.
the Control class provides the methods for interpreting Jet scripts.
Control() - Constructor for class Jet.Control
 
CorefCompare - class Jet.Refres.CorefCompare.
static methods to compare entity annotations (coreference) in two documents or collections.
CorefCompare() - Constructor for class Jet.Refres.CorefCompare
 
CorefEval - class Jet.Refres.CorefEval.
evaluate reference resolution procedure against a key file with references annotated.
CorefEval() - Constructor for class Jet.Refres.CorefEval
 
CorefScorer - class Jet.Refres.CorefScorer.
implements coreference scoring based on the metric developed by Marc Vilain for MUC-6.
CorefScorer() - Constructor for class Jet.Refres.CorefScorer
create a new coreference scorer.
CorefWriter - class Jet.Refres.CorefWriter.
evaluate reference resolution procedure against a key file with references annotated.
CorefWriter() - Constructor for class Jet.Refres.CorefWriter
 
category - Variable in class Jet.Parser.Edge
the category of this node: either a String (grammar symbol) or a Literal.
category - Variable in class Jet.Parser.Reduce
 
charAt(int) - Method in class Jet.Tipster.Document
Returns the character at position posn in the document.
chartParse(Document, int, int, Grammar) - Static method in class Jet.Parser.Parsers
apply a top-down active chart parser to characters posn to end of Document doc using grammar gram.
children - Variable in class Jet.Parser.Edge
for non-leaf nodes, the children of this node.
children(Annotation) - Static method in class Jet.Parser.ParseTreeNode
returns an array containing the children of 'node', or null if the node has no children.
children(Annotation) - Static method in class Jet.Parser.StatParser
returns an array containing the children of 'node', or null if the node has no children.
clear() - Method in class Jet.Concepts.ConceptHierarchy
Removes all the nodes from the hierarchy except the default root UNIVERSE.
clear() - Static method in class Jet.Lex.Lexicon
clears the entire lexicon (remove all entries).
clear() - Method in class Jet.Tipster.Document
Deletes the text and all annotations on a document, creating an empty document.
clearAnnotations() - Method in class Jet.Tipster.Document
Removes all annotations on the document.
clearAppliedPatterns() - Method in class Jet.Pat.PatternView
 
clearEntry(String[]) - Static method in class Jet.Lex.Lexicon
removes the definition (if any) for lexical item words.
clearInputAnnotations(Document) - Static method in class Jet.Parser.StatParser
for ACE: erase all the characters within ANNOTATION ...
clearLines() - Method in class Jet.Tipster.View.JTextPaneX
erase all the lines in the TextPane
clearMatchedPatterns() - Method in class Jet.Pat.PatternView
 
closeAllViews() - Static method in class Jet.JetTest
 
colors - Static variable in class Jet.Tipster.AnnotationColor
 
comlexDeterminers - Static variable in class Jet.Parser.AddSyntacticRelations
 
compareCollections(DocumentCollection, DocumentCollection) - Static method in class Jet.Refres.CorefCompare
compare the entity annotations (coreference) in all documents in Document Collections 'response' and 'key', updating the documents in DocumentCollection 'response'.
compareDocuments(Document, Document) - Static method in class Jet.Refres.CorefCompare
compare the entity annotations (coreference) in Documents 'response' and 'key', updating Document 'response'.
compareTo(Object) - Method in class Jet.Tipster.Span
compares this Span to Object o, which must be a Span.
compatible(String, String, Annotation) - Static method in class Jet.HMM.Retagger
returns true if Penn part-of-speech tag 'pennPOS', as a tag for 'word', is compatible with Jet word definition 'jetDefn'.
computeProbabilities() - Method in class Jet.HMM.BasicHMMemitter
 
computeProbabilities() - Method in class Jet.HMM.BigramHMMemitter
 
computeProbabilities() - Method in class Jet.HMM.HMM
compute the probabilities for token emission and state transition from the counts acquired in training.
computeProbabilities() - Method in class Jet.HMM.HMMemitter
computate probabilities of emission from counts.
computeProbabilities() - Method in class Jet.HMM.HMMstate
compute the probabilities for token emission and arc transition from the counts acquired during training.
computeProbabilities() - Method in class Jet.HMM.SuffixHMMemitter
 
computeProbabilities() - Method in class Jet.HMM.WordFeatureHMMemitter
 
concat(String[]) - Static method in class Jet.Refres.Resolve
append strings in 's', separated by blanks
conceptHierarchy - Static variable in class Jet.Concepts.ConceptHierarchyWindow
 
conceptHierarchy - Static variable in class Jet.JetTest
 
conceptHierarchyFile - Static variable in class Jet.JetTest
 
config - Static variable in class Jet.JetTest
 
containsFeature(String) - Method in class Jet.Lisp.FeatureSet
Returns true if the FeatureSet has feature feat with some value, possibly null.
convertCollection(String, String) - Static method in class Jet.HMM.BIOWriter
converts the collection of XML-coded files 'xmlCollectionName' and writes the BIO format data as a single file on 'bioFileName'.
createModel() - Method in class Jet.HMM.HMM
 

D

DEFAULT_MUTABLE_TREENODE_FLAVOR - Static variable in class Jet.Concepts.Concept
The flavor for DefaultMutableTreeNode
DEFAULT_MUTABLE_TREENODE_FLAVOR - Static variable in class Jet.Concepts.TransferableTreeNode
 
Document - class Jet.Tipster.Document.
Document provides a container for the text of a document and the annotations on a document.
Document() - Constructor for class Jet.Tipster.Document
Creates a new document with no text or annotations.
Document(String) - Constructor for class Jet.Tipster.Document
Creates a new document with text stg and no annotations.
DocumentCollection - class Jet.Tipster.DocumentCollection.
a set of ExternalDocuments.
DocumentCollection(String) - Constructor for class Jet.Tipster.DocumentCollection
create a new DocumentCollection based on file 'fileName'.
dataPath - Static variable in class Jet.JetTest
 
defaultConfig - Static variable in class Jet.JetTest
 
defines(String) - Method in class Jet.Parser.Grammar
returns true if symbol s is defined (a non-terminal) in the grammar
dereference(String) - Method in class Jet.Pat.PatternCollection
returns pattern named patternName, or null if no such pattern exists (alias for getPattern)
dereference(Document) - Static method in class Jet.Scorer.SGMLProcessor
convert all references to Annotations appearing as features of other annotations from their string form ("#nnnn", where nnnn is the id of the Annotation being references) to actual pointers to Annotations.
descendants(Annotation) - Static method in class Jet.Parser.StatParser
returns a Set containing the parse tree node and all of its descendants (its children, the children of its children, etc.).
directory() - Method in class Jet.Tipster.ExternalDocument
returns the directory associated with the document, or 'null' if there is no directory (if the fileName contains the full path).
distance(Annotation, Annotation, Vector) - Static method in class Jet.Refres.Hobbs
computes the distance (number of nodes traversed) in a Hobbs search starting from parse tree node 'm2' and searching backwards for parse tree node 'm1'.
doc1 - Variable in class Jet.Scorer.SGMLScorer
 
doc2 - Variable in class Jet.Scorer.SGMLScorer
 
document() - Method in class Jet.Tipster.Span
Returns the Document associated with a Span.
document - Variable in class Jet.Tipster.View
 
dragDropEnd(DragSourceDropEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DragSourceListener interface
dragEnter(DragSourceDragEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DragSourceListener interface
dragEnter(DropTargetDragEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DropTaregetListener interface
dragExit(DragSourceEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DragSourceListener interface
dragExit(DropTargetEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DropTaregetListener interface
dragGestureRecognized(DragGestureEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DragGestureListener interface
dragOver(DragSourceDragEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DragSourceListener interface
dragOver(DropTargetDragEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DropTaregetListener interface
drop(DropTargetDropEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DropTargetListener interface
dropActionChanged(DragSourceDragEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DragSourceListener interface
dropActionChanged(DropTargetDragEvent) - Method in class Jet.Concepts.ConceptHierarchy
Method of DropTaregetListener interface

E

Edge - class Jet.Parser.Edge.
an abstract class for both inactive edges (complete parse tree nodes) and active edges (partially matched productions).
Edge() - Constructor for class Jet.Parser.Edge
 
EnglishLex - class Jet.Lex.EnglishLex.
EnglishLex contains all the methods for reading and interpreting a file of English lexical entries.
EnglishLex() - Constructor for class Jet.Lex.EnglishLex
 
EntityView - class Jet.Refres.EntityView.
Displays entities and their mentions.
EntityView(Document, int) - Constructor for class Jet.Refres.EntityView
Creates an EntityView for Document doc.
ExternalDocument - class Jet.Tipster.ExternalDocument.
a Document associated with a file.
ExternalDocument(String, String) - Constructor for class Jet.Tipster.ExternalDocument
creates a new external document associated with file 'fileName'.
ExternalDocument(String, String, String) - Constructor for class Jet.Tipster.ExternalDocument
 
emptyTags - Static variable in class Jet.Scorer.SGMLProcessor
a list of tags which do not have corresponding close tags and so are to be converted to empty Annotations.
encoding - Static variable in class Jet.JetTest
 
end - Variable in class Jet.Parser.Edge
the last character (of the document) spanned by this node
end() - Method in class Jet.Tipster.Annotation
returns the end of the span associated with the annotation.
end() - Method in class Jet.Tipster.Span
Returns the end of the span.
endNoWS(Document) - Method in class Jet.Tipster.Span
Returns the end of the span, after trimming any white space at the end of the span.
equalArray(Object[], Object[]) - Static method in class Jet.Refres.Resolve
 
equals(FeatureSet) - Method in class Jet.Lisp.FeatureSet
Returns true if the FeatureSet is equal to fs: whether the two FeatureSets have the same features with equal values.
equals(Span) - Method in class Jet.Tipster.Span
Returns true if the start and end of the spans are both equal.
eval(Document, int, String, HashMap, PatternApplication, PatternNode) - Method in class Jet.Pat.AnnotationPatternElement
 
eval(Document, int, String, HashMap, PatternApplication, PatternNode) - Method in class Jet.Pat.AssignmentPatternElement
 
eval(Document, int, String, HashMap, PatternApplication, PatternNode) - Method in class Jet.Pat.AtomicPatternElement
 
eval(Document, int, HashMap, PatternApplication) - Method in class Jet.Pat.FinalPatternNode
Method invoked when this node is reached during pattern matching; records the actions to be performed.
eval(Document, int, String, HashMap, PatternApplication, PatternNode) - Method in class Jet.Pat.GetEndPatternElement
 
eval(Document, int, String, HashMap, PatternApplication, PatternNode) - Method in class Jet.Pat.GetStartPatternElement
 
eval(Document, int, String, HashMap, PatternApplication, PatternNode) - Method in class Jet.Pat.IntegerPatternElement
 
eval(Document, int, HashMap, PatternApplication) - Method in class Jet.Pat.InternalPatternNode
 
eval(Document, int, String, HashMap, PatternApplication, PatternNode) - Method in class Jet.Pat.NullPatternElement
 
eval(Document, int, String, HashMap, PatternApplication) - Method in class Jet.Pat.PatternArc
 
eval(Document, int, HashMap, PatternApplication) - Method in class Jet.Pat.PatternNode
 
eval(Document, int, String, HashMap, PatternApplication, PatternNode) - Method in class Jet.Pat.TokenStringPatternElement
 
eval(Document, int, String, HashMap, PatternApplication, PatternNode) - Method in class Jet.Pat.UndefinedCapPatternElement
 
evaluate(Document, PatternApplication) - Method in class Jet.Pat.StringExpression
evaluates the StringExpression at the time when print or write action is performed.

F

FeatureSet - class Jet.Lisp.FeatureSet.
A FeatureSet provides a mapping from interned Strings to Objects.
FeatureSet() - Constructor for class Jet.Lisp.FeatureSet
Creates an empty FeatureSet.
FeatureSet(String, Object) - Constructor for class Jet.Lisp.FeatureSet
Creates a FeatureSet with one feature/value pair.
FeatureSet(String, Object, String, Object) - Constructor for class Jet.Lisp.FeatureSet
Creates a FeatureSet with two feature/value pairs.
FeatureSet(String, Object, String, Object, String, Object) - Constructor for class Jet.Lisp.FeatureSet
Creates a FeatureSet with three feature/value pairs.
FeatureSet(FeatureSet) - Constructor for class Jet.Lisp.FeatureSet
creates a new FeatureSet with the same features and values as fs.
FeatureSet(StreamTokenizer, boolean, char) - Constructor for class Jet.Lisp.FeatureSet
This constructor reads a feature set from StreamTokenizer tok.
FeatureTest - class Jet.Pat.FeatureTest.
representation of a condition on a feature value, represented in the pattern language by ? predicate (argument).
FeatureTest(String, Object) - Constructor for class Jet.Pat.FeatureTest
creates a FeatureTest with the specified predicate and argument.
FeatureTest(StreamTokenizer) - Constructor for class Jet.Pat.FeatureTest
creates a FeatureTest from the next tokens in tok.
FinalPatternNode - class Jet.Pat.FinalPatternNode.
A node in the graph representation of a pattern set, representing the end of a path, associated with a set of actions to be performed if that node is reached in pattern matching.
FinalPatternNode(Id, String, Vector) - Constructor for class Jet.Pat.FinalPatternNode
Creates a FinalPatternNode with identifier i and set of actions acts.
features - Variable in class Jet.Lisp.FeatureSet
 
features - Static variable in class Jet.Parser.ParseView
 
fileName() - Method in class Jet.Tipster.ExternalDocument
returns the file name associated with the document.
findMentions(Document) - Static method in class Jet.Refres.CorefScorer
return a Vector of all the mentions in the document (the union of the 'mentions' feature of all entities).
format() - Method in class Jet.Tipster.ExternalDocument
returns the format of the file holding this document: 'sgml' or 'pos'.
fullFileName() - Method in class Jet.Tipster.ExternalDocument
the full file name, including both the directory and the file name within the directory

G

GetEndPatternElement - class Jet.Pat.GetEndPatternElement.
 
GetEndPatternElement(Variable) - Constructor for class Jet.Pat.GetEndPatternElement
 
GetStartPatternElement - class Jet.Pat.GetStartPatternElement.
a pattern element, in the graph representation of a pattern, which binds a variable to the current position in the document being matched.
GetStartPatternElement(Variable) - Constructor for class Jet.Pat.GetStartPatternElement
creates a GetStartPatternElement binding variable v.
Grammar - class Jet.Parser.Grammar.
a context-free grammar.
Grammar(Reader) - Constructor for class Jet.Parser.Grammar
constructs a Grammar from the data on reader.
gatherMentions(Document, Span) - Static method in class Jet.Refres.Resolve
collects and returns the set of all mentions -- constituents which are subject to reference resolution.
gatherSyntacticCoref(Document, Vector) - Static method in class Jet.Refres.Resolve
gatherSyntacticCoref looks for particular syntactic patterns in the text which indicate coreference, and returns a Map with one entry for each such syntactic coreference, linking the anaphor to the antecedent.
gatherTokenStrings(Document, Span) - Static method in class Jet.Lex.Tokenizer
returns an array of Strings corresponding to all the tokens in span of doc.
gatherTokens(Document, Span) - Static method in class Jet.Lex.Tokenizer
returns an array containing all token annotations in span of doc.
get(String) - Method in class Jet.Lisp.FeatureSet
Returns the value associated with feature feat.
get(String) - Method in class Jet.Tipster.Annotation
Returns the value of attribute feature of the annotation.
get(int) - Method in class Jet.Tipster.DocumentCollection
returns the i-th document in the Collection.
getAnnotationTypes() - Method in class Jet.Tipster.Document
Returns a vector of all annotation types.
getChild(Object, int) - Method in class Jet.Parser.ParseTreeModel
 
getChildCount(Object) - Method in class Jet.Parser.ParseTreeModel
 
getColor(Annotation) - Static method in class Jet.Tipster.AnnotationColor
returns the Color associated with Annotation ann, or null if there is no Color association for this Annotation.
getConceptByName(String) - Method in class Jet.Concepts.ConceptHierarchy
Returns the Concept named conceptName or null if no Concept has conceptName.
getConceptByNameIgnoreCase(String) - Method in class Jet.Concepts.ConceptHierarchy
Returns the Concept named conceptName (ignoring case) or null if no Concept has conceptName.
getConceptFor(String) - Method in class Jet.Concepts.ConceptHierarchy
Returns the Concept of the word word or null if no Concept has word.
getConfig(String) - Static method in class Jet.JetTest
return property 'property' from the configuration file.
getConfigFile(String) - Static method in class Jet.JetTest
return file name 'property' from the configuration file; if the value is a relative path, prefix it with the value of 'Jet.dataPath' from the configuration file.
getDefinition() - Method in class Jet.Lex.LexicalEntry
returns the definitions for the lexical entry
getDescription() - Method in class Jet.Concepts.ConcreteFileFilter
 
getDet(Annotation) - Static method in class Jet.Parser.SynFun
returns the determiner of 'constit', or null if the consitutent has no determiner.
getEmissionProb(String, String, Annotation) - Method in class Jet.HMM.HMMstate
returns the probability of emitting 'token' with attributes 'fs' when in this state.
getExtension(File) - Method in class Jet.Concepts.ConcreteFileFilter
 
getHead(Document, Annotation) - Static method in class Jet.Parser.SynFun
returns the head string of constituent 'ann' in a parse tree.
getHeadC(Annotation) - Static method in class Jet.Refres.Resolve
returns the head constituent associated with constituent 'ann'.
getHeadTokens(Document, Annotation) - Static method in class Jet.Refres.Resolve
 
getHuman(Annotation) - Static method in class Jet.Parser.SynFun
returns true if noun phrase 'constit' has a human head, as recorded either an a 'human' feature on PA (by the chunk patterns) or an 'nhuman' feature in the dictionary.
getId() - Method in class Jet.Tipster.Annotation
returns the value of the 'id' feature (converted from an Integer or String to an int).
getImmediateHead(Annotation) - Static method in class Jet.Parser.SynFun
returns the head string for the current node.
getIndexOfChild(Object, Object) - Method in class Jet.Parser.ParseTreeModel
 
getLocalMargin(Document, Annotation[], String, int, int) - Method in class Jet.HMM.HMM
returns the margin for assigning a particular tag to a sequence of tokens.
getMargin() - Method in class Jet.HMM.HMM
if invoked after a call on 'viterbi', returns the margin (the difference in score between the best and second best analyses).
getName() - Method in class Jet.Concepts.Concept
Returns the name of this Concept.
getName() - Method in class Jet.Concepts.Word
Returns the name of this Word.
getName(Document, Annotation) - Static method in class Jet.Parser.SynFun
returns the name associated with a noun phrase, as a single string, or null if the np does not have a name.
getName() - Method in class Jet.Tipster.DocumentCollection
returns the fileName (not the full path) of the Collection.
getNameOrHead(Document, Annotation) - Static method in class Jet.Parser.SynFun
if the head (the end of the 'headC' chain) of constituent 'ann' is a name, return the name itself (with tokens connected by '-'); otherwise return the head as determined by 'getHead'.
getNameTokens(Document, Annotation) - Static method in class Jet.Refres.Resolve
returns the name associated with a noun phrase, as an array of token strings, or null if the np does not have a name.
getNextAnnotationId() - Method in class Jet.Tipster.Document
returns a unique integer for this Document, to be used in assigning an 'id' feature to an Annotation on this Document.
getNgHead(Annotation) - Static method in class Jet.Refres.Resolve
 
getNumber(Annotation) - Static method in class Jet.Parser.SynFun
returns the number feature of noun phrase 'constit' (singular or plural), or 'null' if the number feature is not specified.
getPA(Annotation) - Static method in class Jet.Parser.SynFun
returns the 'pa' feature directly or indirectly associated with parse tree node 'constit'.
getPattern(String) - Method in class Jet.Pat.PatternCollection
returns pattern named patternName, or null if no such pattern exists
getPatternSet(String) - Method in class Jet.Pat.PatternCollection
returns pattern set named patternSetName, or null if no such pattern set exists
getProbability(String, String, FeatureSet) - Method in class Jet.HMM.BasicHMMemitter
 
getProbability(String, String, FeatureSet) - Method in class Jet.HMM.BigramHMMemitter
 
getProbability(String, String, FeatureSet) - Method in class Jet.HMM.HMMemitter
returns the probability that the current HMM state will emit token token with FeatureSet fs.
getProbability(String, String, FeatureSet) - Method in class Jet.HMM.SuffixHMMemitter
 
getProbability(String, String, FeatureSet) - Method in class Jet.HMM.WordFeatureHMMemitter
 
getProductions(String) - Method in class Jet.Parser.Grammar
returns the definition of symbol LHS in the grammar, or null if LHS is not defined in the grammar.
getProductionsEndingIn(Object) - Method in class Jet.Parser.Grammar
returns a Vector of all productions whose last element is element.
getRoot() - Method in class Jet.Parser.ParseTreeModel
 
getState(String) - Method in class Jet.HMM.HMM
returns state with given name, or null if no such state
getString() - Method in class Jet.Lisp.Literal
returns the String associated with this literal.
getSubconceptAt(int) - Method in class Jet.Concepts.Concept
Returns the subconcept at the specified index in this Concept's subconcept array.
getSubconceptCount() - Method in class Jet.Concepts.Concept
Returns the number of subconcepts of this Concept.
getSubconcepts() - Method in class Jet.Concepts.Concept
Returns the vector of the subconcepts of this Concept.
getTagTable() - Method in class Jet.HMM.HMMannotator
returns the tag table (the correspondence between HMM tags and annotation types and features).
getTransferData(DataFlavor) - Method in class Jet.Concepts.Concept
This is a Transferable method.
getTransferData(DataFlavor) - Method in class Jet.Concepts.TransferableTreeNode
 
getTransferData(DataFlavor) - Method in class Jet.Concepts.Word
This is a Transferable method.
getTransferDataFlavors() - Method in class Jet.Concepts.Concept
This is a Transferable method.
getTransferDataFlavors() - Method in class Jet.Concepts.TransferableTreeNode
 
getTransferDataFlavors() - Method in class Jet.Concepts.Word
This is a Transferable method.
getTransitionProb(int) - Method in class Jet.HMM.HMMstate
returns the probability of a transition from this state to the state numbered 'state' in the HMM.
getWordAt(int) - Method in class Jet.Concepts.Concept
Returns the Word at the specified index in this Concept's Word array.
getWordByName(String) - Method in class Jet.Concepts.ConceptHierarchy
Returns the Word named wordName or null if no Word has wordName.
getWordByNameIgnoreCase(String) - Method in class Jet.Concepts.ConceptHierarchy
Returns the Word named wordName (ignoring case) or null if no Word has wordName.
getWordCount() - Method in class Jet.Concepts.Concept
Returns the number of Words of this Concept.
getWords() - Method in class Jet.Concepts.Concept
Returns the vector of the words of this Concept.
gram - Static variable in class Jet.JetTest
 

H

HMM - class Jet.HMM.HMM.
A Hidden Markov Model.
HMM() - Constructor for class Jet.HMM.HMM
create a new HMM using instances of BasicHMMemitter to control emission of tokens from states.
HMM(Class) - Constructor for class Jet.HMM.HMM
create a new HMM using instances of emitterClass to control emission of tokens from states.
HMMNameTagger - class Jet.HMM.HMMNameTagger.
a Named Entity tagger based on the generic HMM (Hidden Markov Model) mechanism.
HMMNameTagger(Class) - Constructor for class Jet.HMM.HMMNameTagger
creates a new HMMNameTagger (with an empty HMM).
HMMTagger - class Jet.HMM.HMMTagger.
a POS (part-of-speech) tagger using a bigram model.
HMMTagger() - Constructor for class Jet.HMM.HMMTagger
create a new HMM-based part-of-speech tagger.
HMMannotator - class Jet.HMM.HMMannotator.
HMMAnnotator provides methods for training and using HMMs with annotated Documents.
HMMannotator(TokenClassifier) - Constructor for class Jet.HMM.HMMannotator
create a new annotator based on HMM h.
HMMarc - class Jet.HMM.HMMarc.
an arc (from one state to another) in a Hidden Markov Model.
HMMemitter - class Jet.HMM.HMMemitter.
this abstract class specifies the methods required for any class which computes the emission probabilities for an HMM.
HMMemitter() - Constructor for class Jet.HMM.HMMemitter
 
HMMstate - class Jet.HMM.HMMstate.
a state of a Hidden Markov Model.
HMMstate(String, String, Class) - Constructor for class Jet.HMM.HMMstate
 
Hobbs - class Jet.Refres.Hobbs.
functions for computing 'Hobbs distance' for reference resolution.
Hobbs() - Constructor for class Jet.Refres.Hobbs
 
head - Variable in class Jet.Parser.ParseTreeNode
for non-leaf nodes, the number of the child (starting at 1) which is the head of this node.
headOfPa(Object) - Static method in class Jet.Parser.SynFun
returns the head string from the value of the 'pa' feature.
hideAnnotations(Document, String, Span) - Static method in class Jet.Pat.NewAnnotationAction
hides (adds the 'hidden' feature) to all annotations of type type beginning at the starting position of span span.
highlight(String) - Method in class Jet.Tipster.View
highlights all the text associated with annotations of type type.
hmm - Variable in class Jet.HMM.HMMemitter
 

I

Id - class Jet.Pat.Id.
 
Id(int) - Constructor for class Jet.Pat.Id
 
IntegerPatternElement - class Jet.Pat.IntegerPatternElement.
a pattern element which matches an integer token.
IntegerPatternElement(FeatureSet) - Constructor for class Jet.Pat.IntegerPatternElement
 
InternalPatternNode - class Jet.Pat.InternalPatternNode.
a non-final node in the graph representation of a pattern set (a node with outgoing arcs).
InternalPatternNode(Id, PatternArc[]) - Constructor for class Jet.Pat.InternalPatternNode
 
InternalPatternNode(Id, Vector) - Constructor for class Jet.Pat.InternalPatternNode
 
id - Variable in class Jet.Pat.PatternNode
 
in(Object, Object[]) - Static method in class Jet.Refres.RefresBuildTrain
 
in(Object, Object[]) - Static method in class Jet.Refres.Resolve
 
inEdgeArray() - Method in class Jet.Pat.PatternGraph
 
inEdges - Variable in class Jet.Pat.PatternGraph
 
includeWhitespace - Static variable in class Jet.Scorer.SGMLProcessor
if true, whitespace following end tag is included as part of span assigned to annotation.
incrementEmitCount(String, String, int) - Method in class Jet.HMM.HMMstate
(during training), add 1 to the count of the times that 'token' is emitted by this state.
initialize() - Static method in class Jet.JetTest
load all resources (lexicon, HMMs, patterns, grammar, concepts) as specified in the .properties file.
initialize(String, Properties) - Static method in class Jet.Parser.StatParser
initialize the parser (load grammar and data files).
initialize(String, String) - Static method in class Jet.Parser.StatParser
initialize the parser.
initializeFromConfig(File) - Static method in class Jet.JetTest
read Jet parameter file from file configFile and load all specified resources.
initializeFromConfig(String) - Static method in class Jet.JetTest
 
initializeSenseResources() - Static method in class Jet.SenseResources
Retrieves the location of the JWNL initialization file from the Jet config file, initializes JWNL, creates an instance of a JWNL Dictionary, and creates an instance of an ACECategorySorter.
intersect(Object[], Object[]) - Static method in class Jet.Refres.Resolve
 
isAbbreviation(String[], String) - Static method in class Jet.Refres.Resolve
returns true if 'abbrev' is an acronym-style abbreviation for 'name' -- i.e., an acronym with periods, such as U.S.A.
isAcronym(String[], String) - Static method in class Jet.Refres.Resolve
returns true if 'acronym' is a possible acronym for 'name', such as 'USA' for 'United States of America'.
isDataFlavorSupported(DataFlavor) - Method in class Jet.Concepts.Concept
This is a Transferable method.
isDataFlavorSupported(DataFlavor) - Method in class Jet.Concepts.TransferableTreeNode
 
isDataFlavorSupported(DataFlavor) - Method in class Jet.Concepts.Word
This is a Transferable method.
isDuplicateConcept(Concept) - Method in class Jet.Concepts.ConceptHierarchy
Checks if concept is already in the hierarchy, if so, pop up an error message.
isDuplicateWord(Word) - Method in class Jet.Concepts.ConceptHierarchy
Checks if word is already in the hierarchy, if so, pop up an error message.
isInitialized() - Static method in class Jet.Parser.StatParser
return true if the parser has already been initialized.
isLeaf() - Method in class Jet.Concepts.Concept
Overrides the isLeaf() method in DefaultMutableTreeNode so that only Words are treated as leaves and Concepts are always treated as internal nodes.
isLeaf() - Method in class Jet.Concepts.Word
Overrides the isLeaf() method in DefaultMutableTreeNode so that only Words are treated as leaves and Concepts are always treated as internal nodes.
isLeaf(Object) - Method in class Jet.Parser.ParseTreeModel
 
isName(Annotation) - Static method in class Jet.Refres.Resolve
returns true if 'consit' is a name.
isOpen() - Method in class Jet.Tipster.ExternalDocument
returns 'true' if the file has been opened.
isa(Concept, Concept) - Static method in class Jet.Concepts.ConceptHierarchy
Returns true if concept1 isa concept2, i.e. concept2 is the parent of concept1 in the concept hierarchy.
isaStar(Concept, Concept) - Static method in class Jet.Concepts.ConceptHierarchy
Returns true if concept1 isa* concept2, i.e. concept2 is concept1 itself or an ancestor of concept1 in the concept hierarchy.

J

Jet - package Jet
The root Jet package provides the methods for top-level system control and for the Console.
Jet.Concepts - package Jet.Concepts
The Concepts package provides the classes for organizing and editing a hierarchy of concepts, and associating the concepts with individual words..
Jet.HMM - package Jet.HMM
The HMM package includes the classes for Hidden Markov Models, and part-of-speech and name taggers implemented using HMMs.  A separate description is available of the overall structure and external representation of these models, provided for those who wish to modify the models.
Jet.Lex - package Jet.Lex
The Lex Package incorporate the code for reading dictionaries, looking words up in dictionaries, and tokenizing text.
Jet.Lisp - package Jet.Lisp
The Lisp package includes the basic classes for symbol manipulation in Jet: literals, variables, and feature sets.
Jet.Parser - package Jet.Parser
The Parser package includes several types of parsers (top-down, bottom-up, and chart).
Jet.Pat - package Jet.Pat
The Pat package encapsulates the basic pattern application mechanism of Jet, sets of pattern/action rules which can be  applied to a document to add or modify annotations on the document.  The external form of the pattern language is described below;  the classes used to encode these patterns are summarized separately.
Jet.Refres - package Jet.Refres
The Refres package provides the methods for identifying coreference relations within a document.
Jet.Scorer - package Jet.Scorer
The Scorer package provides the classes for scoring an annotated document against an answer key..
Jet.Tipster - package Jet.Tipster
The Tipster package provides the basic methods for recording information about documents.  It is loosely based on the 'Tipster Architecture' developed by R.Grishman as part of the Government-sponsored Tipster program.  The basic objects are Documents and Annotations;  a Document is a container for the text of the document, and a set of Annotations on the Document.
Jet.Zoner - package Jet.Zoner
The Zoner package contains methods for identifying text segments (sentences, etc.) within the document.
JetTest - class Jet.JetTest.
contains the main method for Jet, and the methods for initial loading of linguistic data (grammars, lexicons, patterns, etc.).
JetTest() - Constructor for class Jet.JetTest
 
jListValueChanged(ListSelectionEvent) - Method in class Jet.Refres.EntityView
 
jListValueChanged(ListSelectionEvent) - Method in class Jet.Tipster.View
respond to selections in the list of annotation types by highlighting all annotations of that type.
jSplitPaneTop - Variable in class Jet.Tipster.View
 
jTextPane - Variable in class Jet.Tipster.View
 
jbInit(Object[], String) - Method in class Jet.Tipster.View
 
jetToPtbPos(FeatureSet) - Static method in class Jet.HMM.Retagger
given a FeatureSet fs for a Jet lexical constituent (with a 'cat' feature and possibly other features), return a Penn POS consistent with 'fs'.

K

keepLearning - Static variable in class Jet.HMM.ActiveLearner
 
keys() - Method in class Jet.Lisp.FeatureSet
Returns an Enumeration over the features in the feature set.

L

LexicalEntry - class Jet.Lex.LexicalEntry.
the basic element of the (internal) lexicon: the set of definitions of a word or sequence of words.
LexicalEntry(String[], FeatureSet) - Constructor for class Jet.Lex.LexicalEntry
creates a lexical entry for the sequence of words wds and makes fs one definition of this sequence.
Lexicon - class Jet.Lex.Lexicon.
provides (static) data structures for storing and looking up word definitions.
Lexicon() - Constructor for class Jet.Lex.Lexicon
 
Literal - class Jet.Lisp.Literal.
representation of a literal in the grammar, used to match a specific string.
Literal(String) - Constructor for class Jet.Lisp.Literal
creates a new literal for String 'stg'.
length() - Method in class Jet.Tipster.Document
Returns the length of the document (in characters).
lhs() - Method in class Jet.Parser.Production
the left-hand side (defined symbol) of the production.
limit - Static variable in class Jet.Pat.PatternSet
applies the rules in the PatternSet to the specified span of the document.
load(Reader) - Method in class Jet.HMM.HMM
read a description of an HMM from HMMReader.
load(String) - Method in class Jet.HMM.HMM
 
load(String) - Method in class Jet.HMM.HMMNameTagger
load the tag table and the HMM associated with this tagger from file 'fileName'.PrintStream
load(String) - Method in class Jet.HMM.HMMTagger
load the HMM associated with this tagger from file 'fileName'.
lookUp(String[]) - Static method in class Jet.Lex.Lexicon
return an array of the definitions (FeatureSets) associated with the lexical item words, or null if there are no definitions associated with this lexical item.

M

MAX_ANNOTATION_DEPTH - Static variable in class Jet.Tipster.Annotation
in converting an Annotation to a String, the maximum level of nesting of Annotations which will be printed.
main(String[]) - Static method in class Jet.HMM.ActiveLearner
 
main(String[]) - Static method in class Jet.HMM.ActiveLearnerTool
 
main(String[]) - Static method in class Jet.HMM.BIOWriter
 
main(String[]) - Static method in class Jet.HMM.HMMNameTagger
procedures for training and testing the named entity tagger on specific corpora.
main(String[]) - Static method in class Jet.JetTest
 
main(String[]) - Static method in class Jet.Parser.Sparkle
 
main(String[]) - Static method in class Jet.Parser.StatParser
 
main(String[]) - Static method in class Jet.Refres.CorefEval
 
main(String[]) - Static method in class Jet.Refres.CorefScorer
 
main(String[]) - Static method in class Jet.Refres.CorefWriter
 
main(String[]) - Static method in class Jet.Refres.RefresBuildTrain
 
main(String[]) - Static method in class Jet.Tipster.AnnotationTool
 
main(String[]) - Static method in class Jet.Tipster.CollectionAnnotationTool
 
main(String[]) - Static method in class Jet.Tipster.CollectionView
 
main(String[]) - Static method in class Jet.Tipster.Document
 
main(String[]) - Static method in class Jet.Zoner.SpeechSplitter
 
makeParseAnnotations(Document, ParseTreeNode) - Static method in class Jet.Parser.ParseTreeNode
given a parse tree in the form of nested ParseTreeNodes, adds an Annotation of type 'constit' to Document 'doc' for each non-terminal node in the tree.
makePatternGraph() - Method in class Jet.Pat.PatternCollection
converts the set of rules in all pattern sets of this pattern collection into pattern graphs.
makePatternGraph(PatternCollection) - Method in class Jet.Pat.PatternSet
converts the set of rules in this pattern set into a graph.
mappedMentionCount - Variable in class Jet.Refres.CorefScorer
number of mentions in current response Document which have a corresponding mention in key Document (a mention whose head ends at the same position).
match(String) - Method in class Jet.Scorer.SGMLScorer
Compares documents doc1 and doc2 with respect to annotations of type annType.
match(String, String) - Method in class Jet.Scorer.SGMLScorer
Compares annotations of type annType1 of document doc1 with annotations of type annType2 of document doc2.
matchAnnotations(Annotation, Annotation, HashMap) - Static method in class Jet.Pat.Pat
determines whether annotations ann1 and ann2 can be matched (unified), consistent with variable bindings bindings.
matchFS(FeatureSet, FeatureSet, HashMap) - Static method in class Jet.Pat.Pat
determines whether feature sets fs1 and fs2 can be matched (unified), consistent with variable bindings bindings.
matchFound - Variable in class Jet.Pat.PatternApplication
true if a match has been found between the pattern graph and the Document.
matchFullName(String[], String, String[], String) - Static method in class Jet.Refres.Resolve
returns true if 'mentionName' is a possible reference to 'entityName'.
matchPronoun(Document, Annotation, String, Annotation) - Static method in class Jet.Refres.Resolve
return true if pronoun 'mentionHead' is a possible anaphor for entity 'ent' (this also includes possessive pronouns of category 'det', and headless noun phrases of category 'np').
matchSubmenu() - Static method in class Jet.Pat.PatternApplication
Returns the "Pattern Match Trace" submenu used in the Console's "Patterns" menu.
matches(String[]) - Method in class Jet.Lex.LexicalEntry
determines whether the lexical entry matches the sequence of tokens wds.
matches(Document, int) - Method in class Jet.Lex.LexicalEntry
determines whether the lexical entry matches the tokens in Document doc, starting at position posn.
matchingContext(String, ArrayList) - Static method in class Jet.Refres.RefresBuildTrain
 
mismatch1 - Variable in class Jet.Scorer.SGMLScorer
 
mismatch2 - Variable in class Jet.Scorer.SGMLScorer
 

N

NewAnnotationAction - class Jet.Pat.NewAnnotationAction.
the action (in a when statement) for creating a new annotation on a Document.
NewAnnotationAction(String, FeatureSet, Variable) - Constructor for class Jet.Pat.NewAnnotationAction
 
NewAnnotationAction(StreamTokenizer) - Constructor for class Jet.Pat.NewAnnotationAction
creates a NewAnnotationAction from the input processed by StreamTokenizer tok, which should have the form
add [type feature=value feature=value ...]
or
add [type feature=value feature=value ...] over spanVariable
NullPatternElement - class Jet.Pat.NullPatternElement.
a pattern element which always succeeds.
NullPatternElement() - Constructor for class Jet.Pat.NullPatternElement
 
name - Variable in class Jet.HMM.HMMstate
the name of the state.
name - Variable in class Jet.Lisp.Variable
 
nameHMM - Variable in class Jet.HMM.HMMNameTagger
 
nameNomCoref(Document, Annotation, Annotation) - Static method in class Jet.Refres.RefresBuildTrain
detects a nominal which refers back to a name ...
nameNomCoref(Document, String, String, Annotation, Annotation) - Static method in class Jet.Refres.Resolve
return true if a common noun phrase headed by 'mentionHead' is a possible anaphoric reference to the (named) entity 'entity'.
nameTagger - Static variable in class Jet.JetTest
 
needs() - Method in class Jet.Parser.ActiveEdge
returns the next unmatched element in the production.
newConcept(Concept) - Method in class Jet.Concepts.ConceptHierarchy
Makes a new Concept and adds it to selectedConcept in the hierarchy.
newDocument() - Method in class Jet.HMM.HMM
 
newWord(Concept) - Method in class Jet.Concepts.ConceptHierarchy
Makes a new Word and adds it to selectedConcept in the hierarchy.
nomInName(Document, Annotation, Annotation) - Static method in class Jet.Refres.Resolve
 
normalizeGazName(String[], boolean, boolean) - Static method in class Jet.Refres.Resolve
returns a standardized country name, using the gazetteer.
normalizeName(String) - Static method in class Jet.Refres.Resolve
replaces whitespace between tokens with a single blank.
normalizedText(Span) - Method in class Jet.Tipster.Document
Returns the text subsumed by span s, with leading and trailing whitespace removed, and other whitespace sequences replaced by a single blank.
normalizedText(Annotation) - Method in class Jet.Tipster.Document
Returns the text subsumed by annotation ann, with leading and trailing whitespace removed, and other whitespace sequences replaced by a single blank.
nounPlural(String[]) - Static method in class Jet.Lex.EnglishLex
 
numOfMatchingAttrs - Variable in class Jet.Scorer.SGMLScorer
 
numOfMatchingTags - Variable in class Jet.Scorer.SGMLScorer
 
numOfTagsInDoc1 - Variable in class Jet.Scorer.SGMLScorer
 
numOfTagsInDoc2 - Variable in class Jet.Scorer.SGMLScorer
 
numberOfChildren - Variable in class Jet.Parser.Reduce
 

O

open() - Method in class Jet.Tipster.DocumentCollection
read the information about the Collection from an external file.
open() - Method in class Jet.Tipster.ExternalDocument
opens the externalDocument: reads the contents of the file, filling the text and annotations of the document.
otherPreference - Static variable in class Jet.HMM.HMMstate
a preference (log probability) to be given to states with tag 'other'.
outEdges - Variable in class Jet.Pat.PatternGraph
 
overallMappedMentionCount - Variable in class Jet.Refres.CorefScorer
number of corresponding mentions in all documents processed by this instance of CorefScorer.
overallPrecision - Variable in class Jet.Refres.CorefScorer
coreference link precison for all documents processed by this instance of CorefScorer.
overallRecall - Variable in class Jet.Refres.CorefScorer
coreference link recall for all documents processed by this instance of CorefScorer.

P

ParseTreeModel - class Jet.Parser.ParseTreeModel.
provides an implementation of the Java TreeModel for parse trees.
ParseTreeModel(ParseTreeNode) - Constructor for class Jet.Parser.ParseTreeModel
 
ParseTreeNode - class Jet.Parser.ParseTreeNode.
a node of a parse tree.
ParseTreeNode(Object, ParseTreeNode[], int, int, Annotation, String) - Constructor for class Jet.Parser.ParseTreeNode
 
ParseTreeNode(Object, ParseTreeNode[], int, int, int) - Constructor for class Jet.Parser.ParseTreeNode
 
ParseTreeView - class Jet.Parser.ParseTreeView.
a display of a parse tree using the Java tree drawing facility.
ParseTreeView(String, ParseTreeNode) - Constructor for class Jet.Parser.ParseTreeView
create (and make visible) a JFrame containing a display of the parse tree with root root.
ParseView - class Jet.Parser.ParseView.
a graphical display of a parse tree.
ParseView(String, Annotation) - Constructor for class Jet.Parser.ParseView
creates a new Frame entitled 'title' displaying the parse tree rooted at 'root'.
ParseView.JParseComponent - class Jet.Parser.ParseView.JParseComponent.
the JComponent within the ParseView which actually displays the tree.
Parsers - class Jet.Parser.Parsers.
contains static methods for various types of recognizers and parsers.
Parsers() - Constructor for class Jet.Parser.Parsers
 
Pat - class Jet.Pat.Pat.
contains static procedures used in pattern matching.
Pat() - Constructor for class Jet.Pat.Pat
 
PatternAlternation - class Jet.Pat.PatternAlternation.
a pattern element for recording an alternation of patterns (A | B | C).
PatternAlternation(PatternElement[]) - Constructor for class Jet.Pat.PatternAlternation
 
PatternAlternation(Vector) - Constructor for class Jet.Pat.PatternAlternation
 
PatternApplication - class Jet.Pat.PatternApplication.
records information about the matching of a pattern graph against a segment of a Document.
PatternApplication(Document, int) - Constructor for class Jet.Pat.PatternApplication
 
PatternArc - class Jet.Pat.PatternArc.
an arc in the graph representation of a pattern.
PatternArc(AtomicPatternElement, PatternNode) - Constructor for class Jet.Pat.PatternArc
 
PatternCollection - class Jet.Pat.PatternCollection.
 
PatternCollection() - Constructor for class Jet.Pat.PatternCollection
creates an empty PatternCollection
PatternElement - class Jet.Pat.PatternElement.
 
PatternElement() - Constructor for class Jet.Pat.PatternElement
 
PatternGraph - class Jet.Pat.PatternGraph.
 
PatternGraph(Vector, Vector) - Constructor for class Jet.Pat.PatternGraph
 
PatternGraphView - class Jet.Pat.PatternGraphView.
A view of the pattern as a tree.
PatternGraphView(File) - Constructor for class Jet.Pat.PatternGraphView
 
PatternNode - class Jet.Pat.PatternNode.
a node in the graph representation of a pattern set.
PatternNode() - Constructor for class Jet.Pat.PatternNode
 
PatternReference - class Jet.Pat.PatternReference.
an element in a pattern which stands for a reference to another pattern.
PatternReference(String, PatternCollection) - Constructor for class Jet.Pat.PatternReference
creates a reference to the pattern named patternName in collection collection.
PatternRepetition - class Jet.Pat.PatternRepetition.
a pattern element for representing an optional or repeated pattern, A? (zero or one instance of A), A* (zero or more instances of A), or A+ (one or more instances of A).
PatternRepetition(PatternElement, char) - Constructor for class Jet.Pat.PatternRepetition
 
PatternRule - class Jet.Pat.PatternRule.
internal representation of a when statement in a pattern file, indicating that when pattern patternName is matched, actions should be performed.
PatternRule(String, Vector) - Constructor for class Jet.Pat.PatternRule
 
PatternSequence - class Jet.Pat.PatternSequence.
a sequence of pattern elements which are to be matched in succession, to successive portions of a document.
PatternSequence(PatternElement[]) - Constructor for class Jet.Pat.PatternSequence
creates a PatternSequence from an array of PatternElements
PatternSequence(Vector) - Constructor for class Jet.Pat.PatternSequence
creates a PatternSequence from a Vector of PatternElements
PatternSet - class Jet.Pat.PatternSet.
a set of pattern-action rules which are applied together when processing a document.
PatternSet() - Constructor for class Jet.Pat.PatternSet
creates an empty PatternSet (with no rules)
PatternSyntaxError - exception Jet.Pat.PatternSyntaxError.
 
PatternSyntaxError() - Constructor for class Jet.Pat.PatternSyntaxError
 
PatternSyntaxError(String) - Constructor for class Jet.Pat.PatternSyntaxError
 
PatternView - class Jet.Pat.PatternView.
A view of the pattern as a tree.
PatternView(File) - Constructor for class Jet.Pat.PatternView
 
PrintAction - class Jet.Pat.PrintAction.
the encoding of the "print message" action, where message is a StringExpression (one or more strings or variables).
PrintAction(StringExpression) - Constructor for class Jet.Pat.PrintAction
constructs a new PrintAction, given a message
PrintAction(StreamTokenizer) - Constructor for class Jet.Pat.PrintAction
constructs a new PrintAction by reading from StreamTokenizer tok.
Production - class Jet.Parser.Production.
a production of the context-free grammar.
Production(String, Vector) - Constructor for class Jet.Parser.Production
creates a new Production with the specified left hand side and right hand side.
paintComponent(Graphics) - Method in class Jet.Parser.ParseView.JParseComponent
draw the parse tree (once the positions of the nodes have been calcuated by 'init'.
paintComponent(Graphics) - Method in class Jet.Tipster.View.JTextPaneX
paint the TextPane plus the lines specified by prior calls to 'addLine'.
parse(Document, int, int, Grammar) - Static method in class Jet.Parser.Parsers
parse characters posn to end of Document using grammar gram.
parse(Document, Span) - Static method in class Jet.Parser.StatParser
parse the sentence in 'span' of Document 'doc'.
parserMenu() - Static method in class Jet.Parser.Parsers
returns a menu for controlling the parser (part of the Console menu bar).
parserTrace - Static variable in class Jet.Parser.Parsers
if true, causes each parser to write trace messages to the Console.
parserType - Static variable in class Jet.Parser.Parsers
determines which analyzer will be applied by method parse
patternApplyTrace - Static variable in class Jet.Pat.PatternApplication
if true, write a trace message to the console whenever a the actions associated with a pattern are applied.
patternFile - Static variable in class Jet.JetTest
 
patternMatchTrace - Static variable in class Jet.Pat.PatternApplication
if true, write a trace message to the console whenever a pattern is successfully matched.
patternMenu() - Static method in class Jet.Pat.PatternApplication
Returns a menu for controlling the pattern matcher (part of the Console menu bar).
patternName - Variable in class Jet.Pat.FinalPatternNode
 
patternName() - Method in class Jet.Pat.PatternRule
 
patternNames - Variable in class Jet.Pat.PatternCollection
 
patternSetNames - Variable in class Jet.Pat.PatternCollection
 
patternSets - Variable in class Jet.Pat.PatternCollection
 
patterns - Variable in class Jet.Pat.PatternCollection
 
pc - Static variable in class Jet.JetTest
 
pe - Variable in class Jet.Pat.PatternArc
 
perform(Document, PatternApplication) - Method in class Jet.Pat.Action
 
perform(Document, PatternApplication) - Method in class Jet.Pat.AddFeaturesAction
performs the action, adding the specified Annotation.
perform(Document, PatternApplication) - Method in class Jet.Pat.NewAnnotationAction
performs the action, adding the specified Annotation.
perform(Document, PatternApplication) - Method in class Jet.Pat.PrintAction
performs the "print" action, writing the message to the Console.
perform(Document, PatternApplication) - Method in class Jet.Pat.WriteAction
performs the "write" action, writing the message to standard output.
performActions() - Method in class Jet.Pat.PatternApplication
perform the actions associated with this pattern application.
pgv - Static variable in class Jet.Console
 
possessivePronouns - Static variable in class Jet.Parser.AddSyntacticRelations
 
precision - Variable in class Jet.Refres.CorefScorer
coreference link precision for the most recently processed document.
prepareToMakeString(int) - Method in class Jet.Lisp.FeatureSet
add 'id' feature to all Annotations referenced by this FeatureSet.
prepareToMakeString(int) - Method in class Jet.Tipster.Annotation
 
print(String) - Static method in class Jet.Console
if a Console has been created (through the Console constructor), write stg to the console, else write it to System.out.
print() - Method in class Jet.HMM.BasicHMMemitter
 
print() - Method in class Jet.HMM.BigramHMMemitter
 
print() - Method in class Jet.HMM.HMM
print a complete description of the HMM (all states and arcs) to System.out.
print() - Method in class Jet.HMM.HMMemitter
print the information about emission from this state to System.out.
print() - Method in class Jet.HMM.HMMstate
prints a state, along with its tag, its feature constraint (if any) its arcs, and its emission probabilities.
print() - Method in class Jet.HMM.SuffixHMMemitter
 
print() - Method in class Jet.HMM.WordFeatureHMMemitter
 
printTree() - Method in class Jet.Parser.ParseTreeNode
prints the parse tree rooted at this node in an indented form.
println(String) - Static method in class Jet.Console
if a Console has been created (through the Console constructor), write stg + newline to the console, else write it to System.out.
processDocument(Document, OutputStreamWriter, boolean, int) - Static method in class Jet.Control
apply the processDocument script to (all of) document doc.
processFile(String, boolean) - Static method in class Jet.JetTest
process all the documents on file inputFileName, displaying the results in View windows if viewable is true.
processFiles(boolean) - Static method in class Jet.JetTest
for each Jet parameter beginning JetTest.fileName, invoke processFile on that file of documents.
processSentence(Document, Span) - Static method in class Jet.Control
apply the processSentence script to span sentenceSpan of document doc.
prune(Document, Span) - Method in class Jet.HMM.HMMTagger
prune existing 'constit' annotations on 'span' of 'doc' using information from a part-of-speech tagger.
pruneConstit(Document, Span) - Static method in class Jet.HMM.Retagger
prunes constit annotations using Penn tags (recorded as tagger annotations).
ptbToJetFS(String, String) - Static method in class Jet.HMM.Retagger
given an annotation based on Penn tag set, returns an array (possibly empty) of corresponding Jet FeatureSets, with one entry for each possible Jet category and attributes.
put(String, Object) - Method in class Jet.Lisp.FeatureSet
Associates the specified value val with the feature feat.
put(String, Object) - Method in class Jet.Tipster.Annotation
Sets the value of attribute feature of the annotation to value.
putAll(FeatureSet) - Method in class Jet.Lisp.FeatureSet
putAll adds all the feature/value pairs in FeatureSet fs
pv - Static variable in class Jet.Console
 

R

RECOGNIZE - Static variable in class Jet.Parser.Parsers
a constant indicating that the top-down recognizer, recognize, should be used to analyze the text
Reduce - class Jet.Parser.Reduce.
a reduce goal for top-down parsing.
Reduce(String, int) - Constructor for class Jet.Parser.Reduce
creates a Reduce goal.
RefresBuildTrain - class Jet.Refres.RefresBuildTrain.
 
RefresBuildTrain() - Constructor for class Jet.Refres.RefresBuildTrain
 
Resolve - class Jet.Refres.Resolve.
contains static procedures for reference resolution within a document.
Resolve() - Constructor for class Jet.Refres.Resolve
 
Retagger - class Jet.HMM.Retagger.
class Retagger provides methods for converting Penn part-of-speech tags into Jet part-of-speech tags, and using the result to filter the entries in the Jet lexicon.
Retagger() - Constructor for class Jet.HMM.Retagger
 
readChunkModel() - Static method in class Jet.JetTest
if the parameter Chunker.fileName is set, load a chunk model from that file.
readColors() - Static method in class Jet.Tipster.AnnotationColor
read a table of Annotation type/color pairs, one per line, from 'colorFile'.
readConcepts() - Static method in class Jet.JetTest
if the parameter Concepts.fileName is set, load a concept hierarchy from that file.
readDocument(BufferedReader) - Static method in class Jet.JetTest
read a document from rdr.
readGrammar() - Static method in class Jet.JetTest
if the parameter Grammar.fileName is set, load a grammar from that file.
readHierarchy(File) - Method in class Jet.Concepts.ConceptHierarchy
Re-create this ConceptHierarchy from the file fileName.
readLexicon(Reader) - Static method in class Jet.Lex.EnglishLex
reads the English lexicon entries from source reader, expands them (generating inflectional variants), and adds them to the dictionary.
readLexicons() - Static method in class Jet.JetTest
load all lexicons specified by parameters beginning with the string Englishlex.fileName
readNameTags() - Static method in class Jet.JetTest
if the parameter NameTags.fileName is set, load a name tagger HMM from that file.
readPatternCollection(Reader) - Method in class Jet.Pat.PatternCollection
reads a file of pattern statements using reader and builds (or augments) a PatternCollection in the form of patterns and rules.
readPatterns() - Static method in class Jet.JetTest
load all pattern files specified by parameters beginning with the string Pattern.fileName
readTagTable(String) - Method in class Jet.HMM.HMMannotator
read the tag table (the list of annotation types and features) from file 'tagFileName'.
readTagTable(BufferedReader) - Method in class Jet.HMM.HMMannotator
read the tag table (the list of annotation types and features) from BufferedReader 'in'.
readTags() - Static method in class Jet.JetTest
if the parameter Tags.fileName is set, load a part-of-speech HMM from that file.
recall - Variable in class Jet.Refres.CorefScorer
coreference link recall for the most recently processed document.
recognize(Document, int, int, Grammar) - Static method in class Jet.Parser.Parsers
apply a top-down recognizer to characters posn to end of Document using grammar gram.
recordMargin() - Method in class Jet.HMM.HMM
enable the recording of the margin (the difference in score between the best and second best analysis) by the Viterbi decoder.
recordMatch(int, String, HashMap, Vector) - Method in class Jet.Pat.PatternApplication
invoked for a successful match of a pattern.
references(Document, Span) - Static method in class Jet.Refres.RefresBuildTrain
 
references(Document, Span) - Static method in class Jet.Refres.Resolve
Resolve.references resolves the mentions (noun groups) in span of Document doc.
references(Document, Span, Vector) - Static method in class Jet.Refres.Resolve
 
refresh() - Method in class Jet.Pat.PatternView
 
relations - Static variable in class Jet.Parser.ParseView
 
relations - Static variable in class Jet.Parser.Sparkle
the set of relations to be tested.
removeAllChildren() - Method in class Jet.Concepts.Concept
Overrides the removeAllchildren() method of DefaultMutableTreeNode.
removeAnnotation(Annotation) - Method in class Jet.Tipster.Document
Removes annotation ann from the document.
removeAnnotationsOfType(String) - Method in class Jet.Tipster.Document
removes all annotations of type 'type' from the document.
removeConcept(Concept) - Method in class Jet.Concepts.Concept
Removes a subconcept with its children from this Concept.
removeConcept(Concept) - Method in class Jet.Concepts.ConceptHierarchy
Removes a Concept from the hierarchy with all its children.
removeTreeModelListener(TreeModelListener) - Method in class Jet.Parser.ParseTreeModel
 
removeWord(Word) - Method in class Jet.Concepts.Concept
Removes a word from this Concept.
removeWord(Word) - Method in class Jet.Concepts.ConceptHierarchy
Removes a Word from the hierarchy.
report() - Method in class Jet.Scorer.SGMLScorer
 
resetForTraining() - Method in class Jet.HMM.BasicHMMemitter
 
resetForTraining() - Method in class Jet.HMM.BigramHMMemitter
 
resetForTraining() - Method in class Jet.HMM.HMM
 
resetForTraining() - Method in class Jet.HMM.HMMemitter
initialize the emitter prior to training.
resetForTraining() - Method in class Jet.HMM.HMMstate
initialize the state for training.
resetForTraining() - Method in class Jet.HMM.SuffixHMMemitter
 
resetForTraining() - Method in class Jet.HMM.WordFeatureHMMemitter
 
resolveNames(HashMap, int) - Method in class Jet.HMM.HMMstate
 
rhs() - Method in class Jet.Parser.Production
the right-hand size of the production: a vector of Strings (grammar symbols) and Literals.
rootNode - Variable in class Jet.Pat.PatternSet
 

S

SGMLProcessor - class Jet.Scorer.SGMLProcessor.
methods for converting SGML markup into Annotations.
SGMLProcessor() - Constructor for class Jet.Scorer.SGMLProcessor
 
SGMLScorer - class Jet.Scorer.SGMLScorer.
The SGMLScorer class analyzes the homology of two Documents according to one type of their annotations.
SGMLScorer(Document, Document) - Constructor for class Jet.Scorer.SGMLScorer
Construct an SGMLScorer to compare two Documents.
SGMLScorerWindow - class Jet.Scorer.SGMLScorerWindow.
 
SGMLScorerWindow() - Constructor for class Jet.Scorer.SGMLScorerWindow
 
SenseResourceException - exception Jet.SenseResourceException.
 
SenseResourceException(String) - Constructor for class Jet.SenseResourceException
 
SenseResourceException(Throwable) - Constructor for class Jet.SenseResourceException
 
SenseResourceException(String, Throwable) - Constructor for class Jet.SenseResourceException
 
SenseResources - class Jet.SenseResources.
Initializes JWNL and the sense corpus.
SenseResources() - Constructor for class Jet.SenseResources
 
SentenceSplitter - class Jet.Zoner.SentenceSplitter.
container for static method for sentence splitting.
SentenceSplitter() - Constructor for class Jet.Zoner.SentenceSplitter
 
Span - class Jet.Tipster.Span.
A portion of a document, represented by its starting and ending character positions, and a pointer to the document.
Span(int, int) - Constructor for class Jet.Tipster.Span
Creates a span from position s up to position e, with a null document pointer.
SpanBindingPatternElement - class Jet.Pat.SpanBindingPatternElement.
a pattern construct which binds a variable to the span matched by a pattern element.
SpanBindingPatternElement(PatternElement, Variable) - Constructor for class Jet.Pat.SpanBindingPatternElement
creates a SpanBindingPatternElement.
Sparkle - class Jet.Parser.Sparkle.
procedures for generating a set of syntactic dependency relations from a document and comparing the generated set with a reference set of triples.
Sparkle() - Constructor for class Jet.Parser.Sparkle
 
SpeechSplitter - class Jet.Zoner.SpeechSplitter.
a sentence splitter for ASR (transcribed speech) files.
SpeechSplitter() - Constructor for class Jet.Zoner.SpeechSplitter
 
StatParser - class Jet.Parser.StatParser.
an interface to Dan Bikel's implementation of Collins' parser
StatParser() - Constructor for class Jet.Parser.StatParser
 
StringExpression - class Jet.Pat.StringExpression.
a sequence of strings and variables, used as the argument to the "print" and "write" actions.
StringExpression(StreamTokenizer) - Constructor for class Jet.Pat.StringExpression
creates a new StringExpression from the input read by StreamTokenizer tok, which should consist of a sequence of strings and variable names, separated by "+".
SuffixHMMemitter - class Jet.HMM.SuffixHMMemitter.
an HMMemitter, using statistics for exact token match (including case), for token match (ignoring case), for suffix, and for word 'shape'.
SuffixHMMemitter() - Constructor for class Jet.HMM.SuffixHMMemitter
 
SynFun - class Jet.Parser.SynFun.
syntactic functions which retrieve information from parse trees.
SynFun() - Constructor for class Jet.Parser.SynFun
 
save() - Method in class Jet.Tipster.DocumentCollection
save all the Documents in the Collection.
save() - Method in class Jet.Tipster.ExternalDocument
saves the Document to the directory/fileName used for opening the Document.
saveAs(String) - Method in class Jet.Tipster.DocumentCollection
save the Collection to file 'newFileName', and then save all the Documents in the Collection.
saveAs(String, String) - Method in class Jet.Tipster.ExternalDocument
saves the Document to file 'fileName' in directory 'directory'.
saveIn(String) - Method in class Jet.Tipster.ExternalDocument
saves the Document to the originally specified fileName in directory 'directory'.
score(Document, Document) - Method in class Jet.HMM.HMMTagger
compare the 'constit' tags of Documents 'doc' and 'key', and report (to System.out) the agreement rate.
score(Document, Document) - Method in class Jet.Refres.CorefScorer
compare the two documents, responseDoc and keyDoc, setting recall and precision.
scoreCollection(String, String) - Method in class Jet.HMM.HMMNameTagger
computes the recall/precision of 'testCollection' with respect to 'keyCollection' (which should have the same documents) with respect to the name annotations in 'tagsToScore'.
sentenceNumber(int) - Static method in class Jet.Refres.Resolve
returns the number of the sentence containing character 'posn'
setAllTags(boolean) - Method in class Jet.Tipster.ExternalDocument
if allTags == true, specifies that all SGML tags are to be converted to annotations when this document is opened.
setAnnotateEachToken(boolean) - Method in class Jet.HMM.HMMannotator
sets / clears the annotateEachToken flag, which applies only if BItag == false.
setAnnotationAttribute(String, SimpleAttributeSet) - Method in class Jet.Tipster.View
sets the character attributes for the portions of a document associated with annotations of type annType.
setAnnotationAttribute(Vector, SimpleAttributeSet) - Method in class Jet.Tipster.View
sets the character attributes for the portions of a document associated with annotations.
setBItag(boolean) - Method in class Jet.HMM.HMMannotator
sets / clears the BItag flag.
setCacheCount(String, int) - Method in class Jet.HMM.BigramHMMemitter
 
setCacheCount(String, int) - Method in class Jet.HMM.HMMemitter
 
setCacheCount(String, int) - Method in class Jet.HMM.HMMstate
 
setCacheCount(String, int) - Method in class Jet.HMM.SuffixHMMemitter
 
setCacheCount(String, int) - Method in class Jet.HMM.WordFeatureHMMemitter
 
setCharAt(int, char) - Method in class Jet.Tipster.Document
Sets the character at position posn to c.
setDocument(Document) - Method in class Jet.Tipster.Span
Sets the Document associated with a Span.
setEmptyTags(String[]) - Method in class Jet.Tipster.ExternalDocument
specify a list of empty tags -- tags which do not have any corresponding close tags and so should be converted to empty Annotations.
setEncoding(String) - Static method in class Jet.JetTest
set the character set used for reading external documents.
setEnd(int) - Method in class Jet.Tipster.Span
sets the end of the span to 's'.
setFeatureName(String) - Method in class Jet.HMM.HMMstate
imposes a feature constraint on tokens which match this state.
setHMM(HMM) - Method in class Jet.HMM.HMMstate
 
setOutEdges(PatternNode) - Method in class Jet.Pat.PatternGraph
 
setOwner(Component) - Method in class Jet.Concepts.ConceptHierarchy
 
setRecordMargin(boolean) - Method in class Jet.HMM.HMMannotator
turn on/off the feature that records the margin associated with an annotation as a feature 'margin' on the annotation.
setSGMLindent(int) - Method in class Jet.Tipster.Document
set amount to indent sgml tags, per level of tag nesting, for writeSGML.
setSGMLtags(String[]) - Method in class Jet.Tipster.ExternalDocument
sets the list of SGML tags which are to be converted to annotations when this document is opened.
setSGMLwrapMargin(int) - Method in class Jet.Tipster.Document
set right margin for wrapping (inserting newlines) into sgml tags.
setStart(int) - Method in class Jet.Tipster.Span
sets the start of the span to 's'.
setTagTable(String[][]) - Method in class Jet.HMM.HMMannotator
define the tag table for the annotator -- the correspondence between the tags associated with the states and the annotations on the documents.
setTagsToCache(String[]) - Method in class Jet.HMM.HMM
 
setText(String) - Method in class Jet.Tipster.Document
Sets the text of a document.
setTrace(boolean) - Method in class Jet.HMM.HMMannotator
turn on / off the trace
setZoneToTag(String) - Method in class Jet.HMM.HMMannotator
sets the zones to be annotated.
sgmlToDoc(String, String) - Static method in class Jet.Scorer.SGMLProcessor
Converts an SGML-marked String sgmlText to a Document instance with tag tags removed from the text and tag annotations added to the document.
sgmlToDoc(Document, String) - Static method in class Jet.Scorer.SGMLProcessor
Takes a Document doc whose text contains SGML markup; deletes all existing annotations and returns the doc with tag tags removed from the text and tag annotations added to the document.
sgmlToDoc(Document, String, String) - Static method in class Jet.Scorer.SGMLProcessor
 
sgmlToDoc(String, String[]) - Static method in class Jet.Scorer.SGMLProcessor
Converts an SGML-marked String sgmlText to a Document instance with tags tags removed from the text and tags annotations added to the document.
sgmlToDoc(Document, String[]) - Static method in class Jet.Scorer.SGMLProcessor
 
sgmlToDoc(Document, String, String[]) - Static method in class Jet.Scorer.SGMLProcessor
 
showColors() - Static method in class Jet.Tipster.AnnotationColor
 
size() - Method in class Jet.Lisp.FeatureSet
returns the number of features in the FeatureSet.
size() - Method in class Jet.Tipster.DocumentCollection
returns the number of documents in the Collection.
skipWS(Document, int, int) - Static method in class Jet.Lex.Tokenizer
advances to the next non-whitespace character in a document.
skipWS(String, int, int) - Static method in class Jet.Lex.Tokenizer
 
skipWSX(Document, int, int) - Static method in class Jet.Lex.Tokenizer
advances to the next non-whitespace character in a document, skipping any XML tags.
skipWSX(String, int, int) - Static method in class Jet.Lex.Tokenizer
 
sort(Vector) - Static method in class Jet.Tipster.Annotation
sorts a Vector of Annotations based on the end of the span of each Annotation, highest end value first.
span() - Method in class Jet.Tipster.Annotation
returns the span (of text) associated with the annotation.
split(Document, Span) - Static method in class Jet.Zoner.SentenceSplitter
splits the text in textSpan into sentences, adding sentence annotations to the document.
split(Document, Span) - Static method in class Jet.Zoner.SpeechSplitter
 
start - Variable in class Jet.Parser.Edge
the first character (of the document) spanned by this node
start() - Method in class Jet.Tipster.Annotation
returns the start of the span associated with the annotation.
start() - Method in class Jet.Tipster.Span
Returns the start of the span.
startPosition - Variable in class Jet.Pat.PatternApplication
the position in the Document where the matching starts.
stateName - Variable in class Jet.HMM.HMMemitter
 
store(PrintWriter) - Method in class Jet.HMM.BasicHMMemitter
 
store(PrintWriter) - Method in class Jet.HMM.BigramHMMemitter
 
store(PrintWriter) - Method in class Jet.HMM.HMM
save the HMM to stream in a form which can be reloaded using HMM.load(java.io.Reader).
store(String) - Method in class Jet.HMM.HMM
 
store(String) - Method in class Jet.HMM.HMMNameTagger
store the tag table and the HMM associated with this tagger to file 'fileName'.
store(String) - Method in class Jet.HMM.HMMTagger
store the HMM associated with this tagger to file 'fileName'.
store(PrintWriter) - Method in class Jet.HMM.HMMemitter
write the information about emission from this state in a form which can be read by HMM.load(java.io.Reader).
store(PrintWriter) - Method in class Jet.HMM.HMMstate
writes a state, along with its tag, its feature constraint (if any), its arcs, and its emission probabilities, to 'stream', in a form that can be reloaded by HMM.load(java.io.Reader).
store(PrintWriter) - Method in class Jet.HMM.SuffixHMMemitter
 
store(PrintWriter) - Method in class Jet.HMM.WordFeatureHMMemitter
 
subconcepts - Variable in class Jet.Concepts.Concept
The Concepts that isa this Concept
subsetOf(FeatureSet) - Method in class Jet.Lisp.FeatureSet
returns true if the FeatureSet is contained in fs: if every feature in the FeatureSet is present in fs with the same value.
substitute(HashMap) - Method in class Jet.Lisp.FeatureSet
Returns a new feature set in which every value of the original feature set which is a variable has been replace by the binding of that variable in bindings.

T

TDPARSE - Static variable in class Jet.Parser.Parsers
a constant indicating that the top-down parser, TDParse, should be used to analyze the text
TDParse(Document, int, int, Grammar) - Static method in class Jet.Parser.Parsers
apply a top-down backtracking parser to characters posn to end of Document using grammar gram.
TokenStringPatternElement - class Jet.Pat.TokenStringPatternElement.
a pattern element which matches a specific word.
TokenStringPatternElement(String) - Constructor for class Jet.Pat.TokenStringPatternElement
 
Tokenizer - class Jet.Lex.Tokenizer.
Tokenizer contains the methods for dividing a string into tokens.
Tokenizer() - Constructor for class Jet.Lex.Tokenizer
 
TransferableTreeNode - class Jet.Concepts.TransferableTreeNode.
 
TransferableTreeNode(DefaultMutableTreeNode) - Constructor for class Jet.Concepts.TransferableTreeNode
 
tag(Document, Span) - Method in class Jet.HMM.HMMNameTagger
tag span 'span' of Document 'doc' with Named Entity annotations.
tag - Variable in class Jet.HMM.HMMstate
the tag of the state.
tagJet(Document, Span) - Method in class Jet.HMM.HMMTagger
tag 'span' of 'doc' according to the Jet part of speech set.
tagPenn(Document, Span) - Method in class Jet.HMM.HMMTagger
tag 'span' of 'doc' according to the Penn Tree Bank tag set.
tagger - Static variable in class Jet.JetTest
 
target - Variable in class Jet.Pat.PatternArc
 
task(String[]) - Static method in class Jet.HMM.BIOWriter
command-line callable file conversion (invoked by -Dtask=CorefEval).
task(String[]) - Static method in class Jet.Refres.CorefEval
command-line callable coreference evaluation (invoked by jet -CorefEval).
task(String[]) - Static method in class Jet.Refres.EntityView
stand-alone utility to display coreference relations, invoked by jet -CorefView document.
task(String[]) - Static method in class Jet.Tipster.CollectionAnnotationTool
stand-alone utility to annotate a collection, invoked by jet -AnnotateCollection [collection colorFile].
task(String[]) - Static method in class Jet.Tipster.CollectionView
stand-alone utility to display a document collection, invoked by jet -CollectionView collection.
text() - Method in class Jet.Tipster.Document
Returns the entire text of the document.
text(Span) - Method in class Jet.Tipster.Document
Returns the text subsumed by span s.
text(Annotation) - Method in class Jet.Tipster.Document
Returns the text subsumed by annotation ann.
toGraph(Id) - Method in class Jet.Pat.AtomicPatternElement
 
toGraph(Id) - Method in class Jet.Pat.PatternAlternation
 
toGraph(Id) - Method in class Jet.Pat.PatternElement
 
toGraph(Id) - Method in class Jet.Pat.PatternReference
converts the PatternReference to a graph which can be inserted into a pattern graph.
toGraph(Id) - Method in class Jet.Pat.PatternRepetition
converts a PatternRepetition to its graph representation.
toGraph(Id) - Method in class Jet.Pat.PatternSequence
converts the PatternSequence to a graph representation.
toGraph(Id) - Method in class Jet.Pat.SpanBindingPatternElement
converts the pattern element to its pattern graph representation, including a separate GetStartPatternElement and GetEndPatternElement.
toSGMLString() - Method in class Jet.Lisp.FeatureSet
returns a string representation of the feature set, without enclosing braces, of the form
feature1=value1 feature2=value2 ...
which is suitable when the feature set is part of an annotation or SGML tag.
toSGMLString(int, boolean) - Method in class Jet.Lisp.FeatureSet
returns a string representation of the feature set, without enclosing braces, of the form
feature1=value1 feature2=value2 ...
which is suitable when the feature set is part of an annotation or SGML tag.
toSGMLString() - Method in class Jet.Tipster.Annotation
 
toSGMLString(int, boolean) - Method in class Jet.Tipster.Annotation
returns a String representation of the Annotation, without information about the span of the annotation.
toString() - Method in class Jet.Lisp.FeatureSet
returns a printable form of the feature set, of the form
[feature1=value1 feature2=value2 ...].
toString() - Method in class Jet.Lisp.Literal
returns the String associated with this literal, enclosed in double quotes.
toString() - Method in class Jet.Lisp.Variable
 
toString() - Method in class Jet.Parser.ActiveEdge
returns a printable form of the edge, in the form A -> B .
toString() - Method in class Jet.Parser.ParseTreeNode
 
toString() - Method in class Jet.Pat.Action
 
toString() - Method in class Jet.Pat.AddFeaturesAction
 
toString() - Method in class Jet.Pat.AnnotationPatternElement
 
toString() - Method in class Jet.Pat.AssignmentPatternElement
 
toString() - Method in class Jet.Pat.FinalPatternNode
Creates a printable representation of the node, consisting of "-->" followed by representations of the associated actions.
toString() - Method in class Jet.Pat.GetEndPatternElement
 
toString() - Method in class Jet.Pat.GetStartPatternElement
 
toString() - Method in class Jet.Pat.IntegerPatternElement
 
toString() - Method in class Jet.Pat.InternalPatternNode
 
toString() - Method in class Jet.Pat.NewAnnotationAction
 
toString() - Method in class Jet.Pat.NullPatternElement
 
toString() - Method in class Jet.Pat.PatternAlternation
 
toString() - Method in class Jet.Pat.PatternElement
 
toString() - Method in class Jet.Pat.PatternReference
returns a printable form of the pattern reference: the pattern name.
toString() - Method in class Jet.Pat.PatternRepetition
 
toString() - Method in class Jet.Pat.PatternSequence
returns a printable representation of the PatternSequence, consisting of the constituent PatternElements, separated by spaces.
toString() - Method in class Jet.Pat.PrintAction
returns a printable form of the "print" action, consisting of "print" followed by the elements of the message, separated by "+".
toString() - Method in class Jet.Pat.SpanBindingPatternElement
produces a string representation of the pattern element, of the form element : variable
toString() - Method in class Jet.Pat.StringExpression
produces a printable form of the StringExpression, consisting of the elements of the expression, separated by "+".
toString() - Method in class Jet.Pat.TokenStringPatternElement
 
toString() - Method in class Jet.Pat.UndefinedCapPatternElement
 
toString() - Method in class Jet.Pat.WriteAction
returns a printable form of the "write" action, consisting of "write" followed by the elements of the message, separated by "+".
toString() - Method in class Jet.Tipster.Annotation
returns a String representation of the Annotation, including the type, span, and attributes, enclosed in '<' and '>'.
toString() - Method in class Jet.Tipster.Span
Returns a printable form of the span, "[start-end]".
toTree(DefaultMutableTreeNode) - Method in class Jet.Pat.FinalPatternNode
 
toTree(DefaultMutableTreeNode) - Method in class Jet.Pat.InternalPatternNode
 
toTree(DefaultMutableTreeNode) - Method in class Jet.Pat.PatternNode
 
tokenAt(int) - Method in class Jet.Tipster.Document
Returns the token annotation starting at position start, or null if no token starts at this position.
tokenize(Document, Span) - Static method in class Jet.Lex.Tokenizer
tokenizes the portion of Document doc covered by span.
tokenize(String) - Static method in class Jet.Lex.Tokenizer
tokenizes the argument string.
tokenizeOnWS(Document, Span) - Static method in class Jet.Lex.Tokenizer
tokenizes portion 'span' of 'doc', splitting only on white space.
totalMatchingAttrs - Variable in class Jet.Scorer.SGMLScorer
 
totalMatchingTags - Variable in class Jet.Scorer.SGMLScorer
 
totalTagsInDoc1 - Variable in class Jet.Scorer.SGMLScorer
 
totalTagsInDoc2 - Variable in class Jet.Scorer.SGMLScorer
 
trace - Static variable in class Jet.HMM.HMMTagger
if true, use HMMannotator trace to write a one-line message about each part-of-speech assignment to Console.
trace - Static variable in class Jet.Pat.Pat
if true, write a message to the Console whenever a pattern adds an annotation to a Document.
trace - Static variable in class Jet.Refres.Resolve
 
train(Document, Annotation[], String[]) - Method in class Jet.HMM.HMM
a slower algorithm for training the HMM.
train(String) - Method in class Jet.HMM.HMMNameTagger
train the HMMNameTagger using the collection of Documents 'trainingCollection'.
train(Document) - Method in class Jet.HMM.HMMannotator
use the annotations on Document 'doc' to train the HMM.
train(DocumentCollection) - Method in class Jet.HMM.HMMannotator
use the annotations on all documents in DocumentCollection 'col' to train HMM 'h'.
train0(Document, Annotation[], String[]) - Method in class Jet.HMM.HMM
a fast, simple algorithm for training the HMM.
trainOnInstances(String, String, int) - Method in class Jet.HMM.BasicHMMemitter
 
trainOnInstances(String, String, int) - Method in class Jet.HMM.BigramHMMemitter
 
trainOnInstances(String, String, int) - Method in class Jet.HMM.HMMemitter
update emission counts to indicate that String token appeared n times as an output of the current state.
trainOnInstances(String, String, int) - Method in class Jet.HMM.SuffixHMMemitter
 
trainOnInstances(String, String, int) - Method in class Jet.HMM.WordFeatureHMMemitter
 
trainOnSpan(Document, Span) - Method in class Jet.HMM.HMMannotator
use the annotations on Span 'span' of Document 'doc' to train the HMM.
type() - Method in class Jet.Tipster.Annotation
 

U

UNLIKELY - Static variable in class Jet.HMM.HMM
 
UndefinedCapPatternElement - class Jet.Pat.UndefinedCapPatternElement.
 
UndefinedCapPatternElement(FeatureSet) - Constructor for class Jet.Pat.UndefinedCapPatternElement
 
unify(FeatureSet, FeatureSet) - Static method in class Jet.Lisp.FeatureSet
If every feature which occurs in both FeatureSets a and b has the same value in both FeatureSets, returns a new FeatureSet with the union of the features; otherwise returns null.
updateEvents(Document, Span) - Static method in class Jet.Refres.Resolve
 
useBigrams - Static variable in class Jet.HMM.BigramHMMemitter
 

V

Variable - class Jet.Lisp.Variable.
representation of a variable, as used in patterns.
Variable(String) - Constructor for class Jet.Lisp.Variable
 
View - class Jet.Tipster.View.
displays a Document with its annotations.
View(Document, int) - Constructor for class Jet.Tipster.View
Creates a new View.
View() - Constructor for class Jet.Tipster.View
 
View.JTextPaneX - class Jet.Tipster.View.JTextPaneX.
an extension of JTextPane which supports the drawing of lines on top of the text (a facility used by EntityView).
View.JTextPaneX() - Constructor for class Jet.Tipster.View.JTextPaneX
 
valueForPathChanged(TreePath, Object) - Method in class Jet.Parser.ParseTreeModel
 
values - Variable in class Jet.Lisp.FeatureSet
 
views - Static variable in class Jet.JetTest
 
visit() - Method in class Jet.Pat.PatternArc
 
visit() - Method in class Jet.Pat.PatternNode
 
visited() - Method in class Jet.Pat.PatternArc
 
visited() - Method in class Jet.Pat.PatternNode
 
viterbi(Document, Annotation[]) - Method in class Jet.HMM.HMM
a Viterbi decoder for HMMs.
viterbiPath(Document, Annotation[]) - Method in class Jet.HMM.HMM
a Viterbi decoder for HMMs.
viterbiProbability - Variable in class Jet.HMM.HMM
after the viterbi decoder method has been invoked, the probability along the best path found by the decoder.

W

Word - class Jet.Concepts.Word.
A Word is basically a DefaultMutableTreeNode.
Word(Object) - Constructor for class Jet.Concepts.Word
Creates a tree node with no children and parent, initialized with the word as its user object and that does not allow children.
WordFeatureHMMemitter - class Jet.HMM.WordFeatureHMMemitter.
an HMMemitter, using statistics for exact token match (including case), for token match (ignoring case), and for word 'shape'.
WordFeatureHMMemitter() - Constructor for class Jet.HMM.WordFeatureHMMemitter
 
WriteAction - class Jet.Pat.WriteAction.
the encoding of the "write message" action, where message is a StringExpression (one or more strings or variables).
WriteAction(StringExpression) - Constructor for class Jet.Pat.WriteAction
constructs a new WriteAction, given a message
WriteAction(StreamTokenizer) - Constructor for class Jet.Pat.WriteAction
constructs a new WriteAction by reading from StreamTokenizer tok.
within(Span) - Method in class Jet.Tipster.Span
Returns true if Span 's' contains the span.
word - Variable in class Jet.Parser.ParseTreeNode
for leaf nodes, the word matched by this node.
words - Variable in class Jet.Concepts.Concept
The Words of this Concept
writeColors() - Static method in class Jet.Tipster.AnnotationColor
write a table of type/color pairs, one per line, to 'colorFile'.
writeHierarchy(File) - Method in class Jet.Concepts.ConceptHierarchy
Write this ConceptHierarchy to the file fileName.
writeSGML(String) - Method in class Jet.Tipster.Document
Returns the text of the document with each instance of an annotation of type type enclosed in SGML tags.
writeTagTable(PrintWriter) - Method in class Jet.HMM.HMMannotator
writes the tag table (the correspondence between HMM tags and annotation types and features) to PrintWriter 'pw'.
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