Dear Adam,
Here are recent publications:

"Point Pattern Search in Big Data" Fabio Porto, John Rittmeyer, Eduardo Ogasawara, Alberto Krone-Martins, Patric Valduriez, Dennis Shasha Scientific and Statistic Database Management, June 2018, Bolzano-Bozen, Italy

``Simple Pattern-only Heuristics Lead To Fast Subgraph Matching Strategies on Very Large Networks." 
Antonino Aparo, Vincenzo Bonnici, Giovanni Micale, Alfredo Ferro, Dennis Shasha, Alfredo Pulvirenti, Rosalba Giugno
Advances in Intelligent Systems and Computing,  Springer Verlag, ISSN:2194-5357, Oral presentation at the 12th International Conference on Practical Applications of Computational Biology and Bioinformatics (PACBB'18), Toledo (Spain) 20th-22nd June, 2018

Go with the flow: Compositional Abstractions for Concurrent Data Structures.
Siddharth Krishna, Dennis Shasha, and Thomas Wies.
Principles of Programming Languages 2018.
37:1-37:31.


An adaptive geometric search algorithm for macromolecular scaffold selection 
Tian Jiang  P Douglas Renfrew  Kevin Drew  Noah Youngs  Glenn L Butterfoss Richard Bonneau  Dennis Shasha
Protein Engineering, Design and Selection
https://doi.org/10.1093/protein/gzy028

SuperNoder: a tool to discover over-represented modular structures in networks
Danilo Dessě1, Jacopo Cirrone, Diego Reforgiato Recupero, 
and Dennis Shasha
BMC Bioinformatics 2018 19:318
Published on: 10 September 2018
https://doi.org/10.1186/s12859-018-2350-8

ParCorr: Efficient Parallel Methods to Identify Similar Time Series Pairs across Sliding Windows
Djamel Edine Yagoubi,
Reza Akbarinia,
Boyan Kolev,
Oleksandra Levchenko,
Florent Masseglia,
Patrick Valduriez,
Dennis Shasha
Data Mining and Knowledge Discovery, 2018, accepted
32: 1481
https://doi.org/10.1007/s10618-018-0580-z

Temporal transcriptional logic of dynamic regulatory networks underlying nitrogen signaling and use in plants
Kranthi Varala, Amy Marshall-Colón, Jacopo Cirrone, Matthew D. Brooks, Angelo V. Pasquino, Sophie Léran, Shipra Mittal, Tara M. Rock, Molly B. Edwards, Grace J. Kim, Sandrine Ruffel, W. Richard McCombie, Dennis Shasha, and Gloria M. Coruzzi
PNAS June 19, 2018 115 (25) 6494-6499
https://doi.org/10.1073/pnas.1721487115

"Fast Analytical Methods for Finding Significant Labeled Graph Motifs" 
Giovanni Michale, Rosalba Giugno, Alfredo Ferro, Misael Mongiovi, Dennis Shasha,
Alfredo Pulvirenti.
Data Mining Knowledge Discovery 32(2): 504-531 (2018)
https://doi.org/10.1007/s10618-017-0544-8

"Crowdsourcing Thousands of Specialized Labels: a Bayesian active training approach," 
M. Servajean; A. JOLY; D. Shasha; J. Champ; E. Pacitti, 
in IEEE Transactions on Multimedia , Volume: 19, Issue: 6, June 2017, pp. 1376-1391

Warmly,
Dennis