Supported by

NYU-Poly

CATT

IBM Research
List of Accepted Papers
- Haitao Jiang, Cedric Chauve and Binhai Zhu. Breakpoint distance and PQ-trees
- Maxime Crochemore, Costas Iliopoulos, Solon Pissis and German Tischler. Cover array string reconstruction
- Michael Elberfeld and Till Tantau. Phylogeny- and Parsimony-Based Haplotype Inference with Constraints
- Zhi Xu. A Minimal Periods Algorithm with Applications
- Mathias Weller, Johannes Uhlmann, Rudolf Fleischer, Yihui Wang, Xi Wu, Jiong Guo and Rolf Niedermeier. Extended Islands of Tractability for Pasimony Haplotyping
- Tetsuo Asano, Jesper Jansson, Kunihiko Sadakane, Ryuhei Uehara and Gabriel Valiente. Faster Computation of the Robinson-Foulds Distance between Phylogenetic Networks
- Christian Hundt. Affine Image Matching is uniform TC0-complete
- Shoshana Neuburger and Dina Sokol. Small-Space 2D Compressed Dictionary Matching
- Hidetoshi Yokoo. Extension and Faster Implementation of the GRP Transform for Lossless Compression
- Minghui Jiang. On the parameterized complexity of some optimization problems related to multiple-interval graphs
- Omar AitMous, Frédérique Bassino and Cyril Nicaud. Building the Minimal Automaton of A^*X in Linear Time, When X Is of Bounded Cardinality
- Jouni Sirén. Sampled Longest Common Prefix Array
- Luis M. S. Russo and Arlindo Oliveira. Parallel and Distributed Compressed Indexes
- Tomohiro I, Shunsuke Inenaga, Hideo Bannai and Masayuki Takeda. Verifying a Parameterized Border Array in O(n^{1.5}) Time
- Maxime Crochemore, Marek Cygan, Costas Iliopoulos, Marcin Kubica, Jakub Radoszewski, Wojciech Rytter and Tomasz Walen. Algorithms for Three Versions of the Shortest Common Superstring Problem
- Djamal Belazzougui. Succinct Dictionary Matching With No Slowdown
- Yufeng Wu. Bounds on the Minimum Mosaic of Population Sequences Under Recombination
- Thomas Schnattinger, Enno Ohlebusch and Simon Gog. Bidirectional search in a string with wavelet trees
- Benjamin Sach and Raphael Clifford. Pseudo-realtime Pattern Matching: Closing the Gap
- Taehyung Lee, Joong Chae Na, Heejin Park, Kunsoo Park and Jeong Seop Sim. Finding Optimal Alignment and Consensus of Circular Strings
- Michal Nanasi, Tomas Vinar and Brona Brejova. The Highest Expected Reward Decoding for HMMs with Application to Recombination Detection
- Marie-France Sagot, Igor Nor and Danny Hermelin. Mod/Resc Parsimony Inference
- Simone Faro, Domenico Cantone and Emanuele Giaquinta. A Compact Representation of Nondeterministic (Suffix) Automata for the Bit-Parallel Approach
- Tsvi Kopelowitz. The Property Suffix Tree with Dynamic Properties
- Kaizhong Zhang and Yunkun Zhu. Algorithms for Forest Pattern Matching
- Arash Farzan and Guy Blelloch. Succinct Representations of Separable Graphs
- Pablo Montes, Heraldo Memelli, Charles Ward and Steven Skiena. Optimizing Restriction Site Placement for Synthetic Genomes
- Niko Välimäki and Veli Mäkinen. Approximate All-Pairs Suffix/Prefix Overlaps